Oncorhynchus keta (chum salmon): 118369042
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Entry
118369042 CDS
T09424
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118369042
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118369042
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
118369042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_EML
WD40_like
KNTC1_N
PEP5_VPS11_N
Synaptobrevin
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
118369042
NCBI-ProteinID:
XP_052352509
LinkDB
All DBs
Position
35:12757950..12817988
Genome browser
AA seq
1176 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSGTASPQPGTNQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGAVRLFGRAGVECYCQHDSGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNHDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRSCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLEQIGYPIFENPYPLSIHESPVTCVEYFADCPPELIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
ALKGGKEEKPSTEIVDEDPFAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQL
LEVRMQGELNDVDSPDPAGDHPPTPSTPVPPSSSSPTQEGEPPEAQPFTSDDRPRDNVPD
LKVWSAPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVSSSDGLVVFGNSSGLAVVDYLQ
KSLLLNMSTSELYSPSDPYQRQPRSPRKTRQPSGDKDIPPVTSCMSRLSIFYTSMKKTYH
TSNSPLSDNSDGNNISEEKSSKSPTSGSTTPTNSDDEHKQKRFIEMVKSKSRRFSKTVAN
DFAKMSKKISSPTEQKTGLDAKDSSFSRSRSSSVTSIERESREAISSIHLSESFPRKTDS
SPSPSLWLGTTQGTVLVLSLSLPPTGDQRLQQPVGVSSCGTLVRLKGGILTMAFLDSLGA
VLPPSYEPWSELNAPDEEKTRRRRPASPPPTHEGQDSQYAVVCSEKQAKVVGLPSQSCFF
KHNITESSFVLRADVVQMAAGLCLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIART
FCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPLETPEAPNRGFFKGLFGGG
AQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLARARIALDERGQKL
GELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatcagaaaagtgctggacggcttgactgcttcttcctctggcact
gcatctccacaaccaggaactaatcaaaacgatgtgatccaagagacgctacaatcggag
catttccagctctgcaagactgtgcgccatggctttccctaccagccctcctccatggcc
tttgaccctgtgcaaaaaattctggccatcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcagcatgacagtggtgcagctgtaatccagctt
cagtttctggtcaacgagggggcgctggtgagtgccttagctgatgacagcgttcacctg
tggaacctgcggcagaagcaaccagctatcctgcacactctcaaattcaatcgggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacatcggcacagagaaagga
aacatccacatcgtcaacgttgagtccttcacactgtcaggctacgtcattatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cccatggatgagggaaagattttgattggatttgaatgtgggaccgtggtgttgtgggat
ctgaaatgcaaaaaagctgactaccgctacaatcatgatgaggccatccactctgtagcc
tggcaccatgagggaaaacagttcacctgcagccactcagatggaactctgaccacatgg
aacgtacgtgtccccgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatcctcaaagtggagtataaaacgactaga
gctggggacgccttcgtggtcatgtctggaggcctgtcctatgacacggggtgcaggagg
tcctgtctgacggtgatgcatgggaagagtactgctgtcctggagatggactatcccatc
gtagacttcctcacgctctgcgaaacaccatatcctaatgatttccaggagccttatgct
gtagttgtcctcttggaaaaggatttagttgtcatcgaccttgaacaaattgggtaccca
atatttgagaacccgtaccctctgtcgatccacgagtctccagtgacgtgcgtggagtac
tttgctgactgccctcctgaactcatacctgcactttactctgtgggctcccggcaaaag
agacagggctacagtaagaaggaatggcctataagtggtggtaactggggccaaggcaca
ctgagctaccctgagatcatcgtcactggacatgctgacggatcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctctaaagggcggtaaggaggagaagccgagcacagagatagtggatgaggatcccttt
gccatccagactttgtcgtggtgcccagagagcagaatgctgtgtgtggccggagtctcc
gcccacgtcatcatctataggttcagcaaacaggaaataaccacagaggtggtgcagctg
ttggaggtgcgtatgcagggtgagctgaacgatgtggattctccagacccagcaggagac
catcctcccaccccctctaccccagtacccccctcctcctccagccctacccaggaggga
gagccccctgaggcccagcccttcacctctgatgaccggcccagggataacgtaccagac
cttaaggtctggagcgcccctctgaagcagtctcctggttaccaggtggagctagtcatt
caactggtctgggttagtggtgagccgccgcagcagatcaccagcctggccgtcagctcg
tcagacggacttgtggtgtttggcaacagcagcggtctggctgtcgtggactaccttcag
aagagcctcctcctgaacatgagcacgtcagagctgtacagtccctcagacccctaccag
agacagcctcggtcgcctcggaagacacgccagccatctggagacaaagacattccgcct
gtgacatcttgcatgtcccgcctttctatattttatacgtctatgaaaaagacctatcat
acttctaactcccctctcagtgataacagcgatggaaacaacatttcagaggagaaaagc
agcaaatcaccaacatcaggctctacgacacccaccaattcagacgatgaacacaaacag
aaaaggtttatagaaatggtgaagtccaaaagcaggcgcttttccaagacggttgccaat
gactttgccaagatgtcaaagaaaattagctcacctacagagcaaaagacaggcctggat
gccaaggacagttcgttcagccgctcgaggagttccagtgtgaccagtatagagcgggag
tcccgcgaagccatctcctccatccacctcagtgagagtttccccaggaagacggacagc
agccccagccccagcctgtggttgggtactacccagggcactgtcctggtcctctccctc
agcctgccacctacaggggaccagaggctgcagcaacctgtcggagtctcttcctgtggt
actctggtcagactaaaaggaggtatcctgactatggccttcctggactcccttggggcg
gtcctacccccttcctacgagccatggtccgagctcaacgctccagacgaggagaagacg
aggaggcgcaggccggcctccccaccccccacccacgagggtcaggacagccagtacgct
gtggtgtgctcagagaaacaggccaaggtggtgggtctgccctcccagtcctgcttcttc
aaacacaacatcacagagagctctttcgtgctgagagctgacgtggtgcagatggccgct
ggactctgcctcgcctgcttctgtgctaatggacacatcatgactctgagtctacccagt
ctcagaccactcctggatgtgaactaccttcccctgacagacatgaggatagcccggacc
ttctgcttctccaacctgggccaggccatgtacctcacctcccccaccgagatacagaga
atcacatacagccaggagacctgcgacaatctgcaggagatgatgggagagctgtttaca
ccgttagagacacctgaagctcctaatagaggtttcttcaagggcctgtttgggggagga
gctcagtcgctggatagagaagatctgtttggtgagactgcggcgggtaaggcatctcgt
agtctggcgcagcacatccccgggccccagggcatggagggtatgaagggagcagcctct
ggggtggtgggggaccttgcccgtgccaggatagccctggatgagagggggcagaaactg
ggcgagctggaggacagaaccgcagccatgatggccagcgctgactccttctctaaacat
gctcatgatatgatgctgaagtacaaagataagaagtggtaccagctctga
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