Oncorhynchus keta (chum salmon): 118369120
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Entry
118369120 CDS
T09424
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118369120
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118369120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
HTH_31
HTH_26
DUF494
Motif
Other DBs
NCBI-GeneID:
118369120
NCBI-ProteinID:
XP_052352977
LinkDB
All DBs
Position
35:39798829..39829705
Genome browser
AA seq
577 aa
AA seq
DB search
MHCKLAANIAIIKDYKFHDDLDKTAESRQRMSQFTDEPRFTIEQIDLLQRLRRTGMTKPE
ILHALDTLDRLDRQHGHKFGRRPQTQPQPVGQGPTSNSNANMTSSSSSNNVVASSSTSTA
ATQTGYQANGSGGSGLSPSPSNNYDMSPPPPAVVSAPVALAAVAQNGVGGGGEIVAMTNG
KLSPPRFPISVSAVSGGVTGRGYGFEASEEELDVDDKVEQLMRRDSAIIKEEIKVFLGNR
RISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPGATLTMRPAPMS
LEDVVEWRQTPPPISSTPGSFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANA
CNAVIQKPGKKLSDLEKVTSLKVYNWFANRRKEIKRRANIEEAAILESHGIDVQSPGGHS
NGDDIEGNDFPDQGCEVPLFEKRAVTRPFSRLDLSSPTQVPTLLPSWLAAWPGSGRGGLA
AQRASSLIGRSLLSGWGLAQGAGMEGSRLTGVSWSPPSPQDDDSTNHSNALEHQDPIALA
VEMAAVNHSILALATQAGGGLALGGTGSDIKTEVLDD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcaaattagctgctaatatcgctatcataaaggactacaaattccatgatgac
ctggacaagactgctgaatcgaggcaaaggatgtctcagttcaccgatgagcctcgcttt
accatcgagcagattgacctgctccaacggctgaggaggacggggatgaccaagccagag
atcctccacgccctggataccctggacagactggaccgccagcacggacacaagtttgga
cgccgcccccagacgcagccccagcctgtcggtcagggaccgacgtccaatagcaatgct
aatatgacgtcgtcttcctcgtccaataatgttgtggcgtcctcgtcgacgtccacggcc
gccacacagactggttaccaggcgaatgggagtggcgggagtggtctgtcgccgtcacct
agcaacaactatgatatgtcgccgccccctccggcggttgtatctgcccctgttgctttg
gcagcggtggctcagaacggggttggtggcggcggagagattgttgccatgacgaacgga
aagctgtctccaccacggtttcctatcagtgttagtgcggttagtggtggcgtgacgggg
agaggctacggttttgaggccagcgaggaggaactagacgtggacgacaaagtggagcag
ctcatgagaagggacagtgccataatcaaggaggagatcaaggtgttcctggggaacagg
cgcatctctcaggccgtggtggctcaggtcacaggtatcagtcagagtcgtatctcccac
tggctgctccagcagggctcggacctcagtgaacagaagaagagggccttctaccgctgg
taccagttggagaagaccacccccggtgccactctgacgatgcggcctgcccccatgtct
ctggaggatgtggttgagtggcggcagactccgccccctataagctccacccccgggagc
ttccgtctgcgccgaggcagtcggttcacctggaggaaagaatgtctggctgtgatggag
agttacttcaatgacaaccagtaccctgatgaagctaaaagagaggagatcgctaacgcc
tgcaacgctgtcatccagaaaccagggaagaagctgtctgatctggagaaagtcacgtct
ctgaaggtctacaactggtttgccaaccgccgcaaggagatcaagagacgcgccaacata
gaagaagcagcaatcctggagagtcatgggatcgacgtccagagtcctggaggacactcc
aacggcgatgacattgaggggaatgacttccctgaccagggctgtgaagtccctctgttt
gagaagagagctgttaccagacccttcagtcgactagatctgtcctctcccacacaggtg
cccaccctgctgcccagctggctggcggcttggcccggctcgggcagggggggcttggct
gcccagagggctagctctctgattggccgctccttgctctctgggtggggtctcgctcag
ggggcggggatggaaggttccagactgacaggtgtgtcctggtctcccccctccccccag
gatgatgactccaccaatcacagcaatgccctggagcaccaggatcccatcgcccttgct
gtggagatggcggccgtcaatcacagcatcctcgccctggcaacgcaggcggggggagga
ttggccctgggcgggacaggaagtgacatcaaaacagaggtgctggacgactag
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