Oncorhynchus keta (chum salmon): 118369166
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Entry
118369166 CDS
T09424
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118369166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118369166
Ion channels [BR:
oke04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118369166
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118369166
NCBI-ProteinID:
XP_052353220
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Position
35:complement(64017542..64036700)
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AA seq
501 aa
AA seq
DB search
MTMWMKMGERMNLFLWVVSACLCLTLTGASESERLLHQKIFQNYNLKVRPAKQWEEKVQV
RVGMTLSQLVSLNEKNEEMTTNVFMNMAWTDYRLSWNPEDYDNIDVLRIPPNKVWRPDIY
LINNNDGQFDVALYVNVLVYSDGTVNWLPPAIYRSSCPIEVAYFPFDWQNCTMVFRSYTY
DSSEVDLQYALDEKGEEIHEIIIDENTFTENGEWAICHKPSRKNVNPEDLYEDITFYLII
ERKPLFYVVNIIVPCILTMVLAIFVFYLPPGACEKMTLSISVLIALTVFMLLLADKVPET
SLAIPLIVNYVMFTMILVTFSVILSVVVLNLHHRTPYTHIMPPWVRKVFIHFLPKYLGMQ
RPHPEEPLEEEPSDDTPLQSIDGRRPGGEYFFRKINPELVLPWRGRSESTVQLQRFFDSD
NYCLILPPDLKSAIAAVTYMAEQLKKQDGSDSETGDWQYIAIVVDRLFLWLFVIITTLGT
LAMFMDARLNYTPDEPFPLRP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtggatgaagatgggagagaggatgaaccttttcctgtgggtggtgtctgct
tgcctctgcctcactctcactggtgcgtcagagtcagagaggctgcttcaccagaagatc
ttccagaactacaacctgaaggtccggccagctaaacaatgggaggagaaagtccaggtc
cgagtggggatgaccctctcccagctcgtcagcctgaacgagaagaacgaggagatgaca
accaatgtgttcatgaatatggcgtggactgactacagattatcatggaatccagaggat
tacgataatatagatgtcctcaggattcctcccaacaaggtgtggcggccagacatctac
ctcatcaacaataatgatggtcagtttgacgtggctctgtatgtcaacgtgctggtctac
agtgatgggacagtcaactggctgcctcctgctatctaccgcagcagctgccctatagag
gtggcgtactttccgtttgactggcagaactgcaccatggtgttccgctcctacacctac
gactcatcagaggtggacctgcagtacgccctggatgagaaaggagaggagatacatgag
attatcatagatgagaacaccttcactgagaacggggagtgggcgatctgccataagccc
agcagaaagaacgtgaaccccgaggacctgtatgaagacatcaccttctatctcatcatc
gagaggaagcctctcttctacgtcgttaacatcatcgtgccctgcatcctcaccatggtc
ctggccatctttgtcttctatctaccacctggcgcatgtgagaagatgaccctgtccatc
tctgtcctcatcgctctcactgtgttcatgctgctgctggctgacaaggtccccgagacc
tccctggccatccctcttattgttaactatgtcatgttcaccatgatcctggtcaccttc
tcagtcatcctcagtgtggtggtcctcaacttgcaccatcggaccccctacacacacatt
atgcccccttgggtgcgcaaggtgttcatccacttcctgccgaagtatctgggcatgcag
aggccccacccagaggagcctttggaggaggagcctagtgatgatacgcccctccagagc
atcgacggacgcaggccggggggagagtacttcttcaggaagatcaaccctgaactggtc
ctaccctggagaggcaggagtgagagtacagtacagctccagaggttctttgacagtgac
aactactgtctgatcctccccccggacctcaagtcagccatcgctgccgtcacatacatg
gctgagcagctgaagaagcaggatggctcagactcggagacaggagactggcagtacatt
gccatcgtggtggacaggctgttcctgtggctgtttgtcatcattactactctggggact
ctggccatgttcatggacgccagactcaactacaccccagacgaaccgttccccctgagg
ccgtag
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