Oncorhynchus keta (chum salmon): 118369183
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Entry
118369183 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118369183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118369183
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118369183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
WDCP
Pept_S41_N_bact
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
118369183
NCBI-ProteinID:
XP_052353337
LinkDB
All DBs
Position
35:67910565..67946431
Genome browser
AA seq
1453 aa
AA seq
DB search
MSLRTPTSTLDRISSLTIGDSERNTSSGQQREPPADIPPENTGPGLVQRCVVVQKDQLGF
GFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSGPYVAL
TLQGPPPSAAALVLQPLPTDLLSNQRTSLGGEAPPPPPPPLPPGLTSTPSQRINKPLQNL
DVQKHATQILRNMLEQGEAELQDLMEELSRNPSPSLEERIDSAKRRTQQVRVKIKQDLDG
TRPKAVSNYVIAGDARLSVDSSEGDFETCESPHSSPXFFRTPLRWRQGSDTHTFSDSAGK
TQIIGPEEEEEEDDSYALNEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPLLFYLS
VEAYLGSSPKDARVLAPQICSHFLDPDAPLKIRVREEYLADIESRLHAQEDIRGPLSELQ
QQVLPDIQDQIQDYRNKQMMGLGSLFGEGDLQQLDGDPAKEKQVVDRQVTALWEILSKHE
DDRSSPLASAVLLYLRHSGIKLRDSRVFPGLGTEKEKWLSFFPKTKKLSSAKKEKDGEDR
KRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENQPEIPGEEGDEGDLQRL
SSSSLGEDSMDSPMVSVRLARSESLKAQGEGRRWGGASGVETVPRSRSDVDMEDCGEEIE
GPGLRPLHHSASSSATSSSARSLENPTPPYTPRSSRRQFEESPVALLPDAPALEDDVVDS
HNWQETVAPQVLATLCPREVDRQAVIYELLTTEVSHLRTLRVLDQVFFQKMRCVLSSDEL
ACIFPNLPQVYQLHVSLCEAMKKKRESPIVQGIGDIMLARFEGVAGEEFQEQASHLCSQQ
SQALELIKNKQRKDPRFTHIIQECEASPHCRRLQLKDMLVSETQRLTKYPLLLDNIIKHT
EAGSTDLPPLQRAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPTPQFKSLDLTSKTM
IHEGPLTWKVNKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRWLGGGGGGSGDTKAS
FSPVVQLDSLLVRSVATDNKALYVISTTERKIYELVAGTSSEKNIWKDQLEKTISLVAGS
SPSTNNRSTPIFSPSLGNASPVSTGSHVYQSDDSMTEQVVFMETDSPNDEDNELARTTPT
DQSGAFFCGEGQDYVKRRIGVAEAALEDVETLRQLIFRDLEDGWSHGSDGKPTNEAANER
SPFNYHQRPLSSETLLGVSPSQWEAEHAEAPPSEVECPSVHVVRKAVVAGSPSIPDDITE
DATLHSDQSPEPRGEASVRGNVFYLAMPTEQGEGLLDESHTDEVNDPPTPTTTELPDLEQ
EVISSPVQTHEKEGQVASIMSADNQSERGNLSRQEGQSQSQKSLQSHIIKNVDDIFHTIE
ELMRKLHQLRDIETAHHQLLKTLREPPVNPESGDLFHIQATVVRTPFLDRDPGDGKEASP
AEPAKLKILSTGF
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcacacccacctcaacactggacaggataagcagcctgacgataggagac
tcggagcgcaacacctccagcggccagcagagggagcctccagctgacatcccccctgag
aacacaggtccaggtctggttcagagatgtgtggtggtacagaaagaccagctggggttt
ggcttcaccgtgtgtggcgagaggatcaagctggtgcagaatgtccgaccaggtggtgca
gcagtcaaggcaggggtccacgagggagacagaatcataaaggtgaacggctcgctggtg
tcgtccatgtctcaccaggaggtggtgaagctcatcaagtctgggccgtatgttgccctg
acacttcaaggaccgcccccttcagcagccgccctcgtcctacaacccctccccactgac
ctcttgtccaatcagaggacgtcactgggaggtgaagccccgccaccaccacctccaccc
ctgccccccggacttaccagcaccccctcccaaagaatcaacaaaccactacagaaccta
gatgtacagaaacacgccactcagatcctcaggaacatgttggaacagggagaggctgag
ctccaggacctgatggaggagctgtcacggaacccctccccatcactggaggagcgaatc
gatagtgccaagaggcgcacccaacaagtgcgggttaaaatcaagcaagatctggatgga
actcgccccaaagctgtgtccaactatgtaatagcaggagatgctcggctgtcggtggac
tcaagtgaaggagactttgagacctgtgagagcccccactcctcccctnccttcttcagg
acccccctacgctggagacagggctccgacacacacaccttctctgactcggctgggaag
actcagatcattggccccgaggaagaggaggaagaggacgacagctatgcactcaatgag
atggacggtccatttcaggacatagagcttctcaagtcgagaccggcccatatgacggtg
ttcatgagatatgtcttcagccagctactggatcccaacccactgctgttctacctgtcg
gtggaggcctacctgggctccagccctaaagacgcccgtgtcctcgcgcctcagatctgc
tcccacttcctggaccctgacgctccgttaaaaatcagagtacgagaagaatacctggct
gatatagagagtcgtctccatgcccaggaggacatcaggggacctctgtctgagctccaa
cagcaggtgctgcctgacattcaggaccaaatacaggactacaggaacaagcagatgatg
ggtctgggctctctgtttggagagggagacctgcagcagctggatggagacccagccaag
gagaaacaggtggtggacagacaggtcactgctctctgggagatactctcgaagcacgaa
gacgacagaagttctcctctagcctctgcggtgctgttgtacctccgtcactcgggcatt
aagctgagggactccagggtgtttccaggactcggcactgagaaggagaagtggctctcc
tttttccccaagaccaagaagctgagcagtgcaaagaaagagaaggatggagaggacagg
aagagaaaccccatcctgaagtatatcggcaagcccaggagcacctcccagtccacgttc
catgtccccttgtctcccactgaagtgcgtcctggcagtgtgaggaacatcatccagcag
tttgagaaccaaccagagatccccggggaggagggggacgagggagacctccagagactg
tcctccagcagcctgggagaggacagtatggacagccctatggtgtcggtgcgtctggct
cgtagtgagtctctgaaggcgcagggggaggggcgtcggtggggcggggcttcaggagtg
gagacagtccctcgttcccgtagcgacgtggacatggaggactgtggggaggagatagag
gggccgggcctgagacccctacaccacagcgcctcctcctcagccaccagtagctcagca
cgatccttggagaaccccacgcctccatacacccctcggtcgtctagacgacagtttgag
gagtccccggtggccctgcttcctgatgccccagccctagaggacgacgtggtggacagt
cacaactggcaagagacagtggcccctcaggtcctggctacactctgtccccgagaggtg
gaccgacaggccgtcatttacgagttgttgacgacagaggtgtctcacctgcgtactctc
agggtcttggatcaggtgtttttccagaagatgaggtgtgttctgagctctgacgagctg
gcctgcatcttccccaacctgcctcaggtctaccaactacatgtgagcctgtgtgaagcc
atgaagaagaaaagggaatctcccatcgttcagggcatcggtgacatcatgctggccagg
tttgagggcgtggcgggggaggagtttcaggagcaggcgtcccacctgtgcagccagcag
tctcaggctctggaactcattaagaacaagcagcgcaaagacccccgcttcacacacatc
atccaggagtgtgaggccagtcctcactgtaggaggctgcagctgaaggacatgctggtg
tctgagacacagagactcaccaagtaccctctgttactggacaacatcatcaaacacaca
gaggctggctccacagacctcccgcctctccaacgtgcacaggcctgctgccgcgggatt
ctgcaggccgtcaatgaagtcgtcagggagactgaacaccggcaacggctcaaccaatac
cagcgcaggctggaccccacgccacagttcaagagtctggacctgaccagtaagacaatg
atccatgagggtcctctcacctggaaagtcaataaagacaaaactttagagatccaggcc
ctgctgctatcagacctgctggttctgctccagagaggtccagacgaccggctgctactg
cgctgcccgtcccgctggctggggggaggaggaggtggtagcggggacaccaaggcctcc
ttcagccccgtggtccaactagactccctcctggtgcgctctgtggccacagacaacaag
gccctgtacgtcatcagcaccacagagagaaagatctatgaactggtagcggggacgtcc
tcagagaaaaacatctggaaggaccaacttgaaaagaccatctcattggttgctggctcc
tcaccttcgaccaataacagatccacacctattttctccccaagtcttggcaacgcttcc
cctgtctcaactggcagccatgtctatcaatcagacgactcgatgacggagcaggtcgtt
ttcatggagacggactcccctaacgatgaggataacgagctcgcacgcaccacaccaacg
gaccaatcaggagctttcttctgcggggaggggcaggactacgtcaagcgacgaattgga
gtagcagaggcagctcttgaagacgtggagacgctaaggcagctgattttccgcgacctg
gaagatgggtggagtcacggctcagatggaaagcccacaaacgaggcagccaatgagagg
agcccgttcaattaccaccagaggccgctgtcctctgagactctccttggcgtcagtccc
agccaatgggaggctgagcacgcagaagccccgccctcggaggtggagtgccccagtgtg
catgttgtgaggaaagcagtggttgcgggctccccttctatccctgatgacatcactgaa
gatgccaccctccactctgaccaatcacctgagccgagaggcgaggccagtgtacgggga
aacgtgttctatctggcgatgcctacagagcagggagagggactgctggacgagagtcac
acagatgaggtcaacgacccccccaccccgaccaccactgaacttcctgatctggaacag
gaagtgatttcatcgcccgtacagactcatgagaaagaagggcaggtcgcttccatcatg
tctgcggacaatcaatcggagaggggaaatctgagtcggcaggaagggcagagtcaatca
caaaagagcctccagagccatataatcaaaaacgtggatgacattttccacaccatcgaa
gagttgatgagaaagctgcaccagctgagggacatagagacagctcatcaccagctcctg
aaaacactgagagagccgcctgtcaatccagagtctggtgacctctttcatatccaggca
accgtcgtcaggacaccgtttctggaccgggacccaggggacggaaaggaggcgagccca
gcagagccagccaagctgaagatcctgtccactggattctaa
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integrated database retrieval system
