KEGG   Oncorhynchus keta (chum salmon): 118369412
Entry
118369412         CDS       T09424                                 
Name
(RefSeq) protein bicaudal C homolog 1-like isoform X1
  KO
K18756  protein bicaudal C
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118369412
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118369412
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_GLD-3_1st SAM_2 KH_Vigilin KH-I_KHDC4-BBP KH_NusA_2nd KH_Mug60-KHD4 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 118369412
NCBI-ProteinID: XP_052354600
LinkDB
Position
36:20562744..20639813
AA seq 993 aa
MAAQCDSLSGYLQQSDQGSNSERSTDSPVAGSEDDLSGPHALPDPEWTEERFRVDRKKLE
IMLLAATEGRVNGGEDFFQKVMDETKTQIAWPSKLKIGAKSKKDPHIKVCGKRDNVREAK
DRIMSVLDTKQSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAE
KSNQVSIAGQPGGVEAARSKIRELLPLVLSFELPAIVQPDPGSPTVQHISQTYNLTVSFK
PPTRLYGTTGVVRGSQNNSSAVKRGTAILLEHLAGSLASAISVSTHLDIAPQHHLFMMGR
NGSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGIIESVCVARQYLMGCLPLVLMFDIKE
DIEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGV
SSALSPSTIGPSPTLICPVGLDILASAGLGLSSLGLLGPSAPHSLSSSPAPNSVLNSLNS
SMSPLQNPPSPSPSLWPSSLTSTQGFSSQLMMHPVAQATLSSILLSGVKGYTQNTPSPPP
GLAPIDKQTNGVPDCSKGPCTMNGHVKHPGSVYGRMSSASLADTVLNPNQCDSVQEASVH
NQSEPRSSKSNQDEGSDTFVEVGMPRSPSHSANGNELKQMLASCKTSGKRHAVELLQGTK
NSHLQYVCPELHSDCLLSDPESSASDGPVTDKRAPGSERAAERAAERAAQQNERDRIRLA
PHSSFANMQVQLEALEYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKE
LRRANHVSYKPTMSTTYEVNSDYEGSPLSLSRSGSREGVGNGSDSDNWRDRNGVGNGLVN
HAEFPASVSSPKRKQNKSAAEHYLSSSNYMDCISSVTGSNGCSLQSSLKGSDLPELFSKL
GLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISGVNDYELNKNRRKL
FEPPIRSSFLEGGASGRLSRQFHADMASVSGRW
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgactctttgagcggatacttgcaacagtccgaccagggctcgaac
agcgagcgcagtaccgactccccggtcgccggctccgaggatgacttgagcggaccccat
gccttaccagacccggagtggacggaggagagatttcgagtggaccgcaagaaactggaa
atcatgttattagcggcaactgagggaagagtcaatggtggcgaggacttctttcagaag
gtcatggatgaaaccaaaacacagatagcgtggccttccaaactgaagatcggcgccaag
tccaaaaaagatccgcacattaaggtttgtggaaagagagacaacgtgagggaagccaaa
gaccgaatcatgtcagtcctcgacacaaagcagagtaacagggtaacccttaagatggac
gtgtcccacacagagcactcccacgtcatcggcaagggaggcaacaacatcaagaaggtg
atggaggacacgggctgccacatccacttcccagactccaaccgcaacaaccaggcggag
aagagcaaccaggtgtccattgcaggccagccaggaggggtagaggcagctcgatccaaa
atcagagagctgctccctctggttctgtcgtttgagctgccagccatcgtgcagcctgac
ccaggctctcccacagtgcagcacatctcccagacatacaacctcaccgtctccttcaag
ccccccacacgtctctatgggaccaccggagtggtccgcggctcccagaacaactctagt
gccgtcaagagaggcactgccatattgctggagcacctggcgggcagcctggccagtgcc
atctcagtcagtacccacctggacatcgccccccagcaccacctcttcatgatgggccgc
aacggcagcaacatcaagcacatcacccagaggacaggagcccagatccacttccccgac
cccaacagcccccagaagaaatctactgtttacatccaaggaatcatcgagtctgtctgc
gtggcgcgccagtacctcatgggctgtctaccgctggtgctgatgtttgacattaaagag
gacatcgaggtggagccccagtgtatcaccgctctgatggagcagctggatgtcttcatc
agcatcaagcccaaaccaaagcagcccagcaagtctgtgatcgtaaagagtgtggagcgg
aatgcagtgaacatgtacgaggcccggaagtttctgctgggtctggagagcaacggagtt
tcatcagccctgtccccctcaaccattggcccctcccccactctcatctgtcccgtcggc
ctggacatcctggcctcagctggcctggggctgagcagtctgggcctcctggggccgtca
gcgccccattccctcagtagctccccggctccaaactctgtcctcaacagtctgaactct
tccatgagccccctgcagaaccccccgtctccttccccctcactgtggcccagctctctc
accagcacacaaggcttctcgtctcagttgatgatgcaccctgtagcccaggccactctg
agcagtatcctgctctctggggtcaaggggtacacccagaacactccctcccctcccccc
ggcctcgccccgatcgacaagcagaccaacggagtccctgactgctccaaaggtccctgt
accatgaatggacatgtaaagcaccctggctcagtctatggaaggatgtccagtgcatct
ctggcagacacagttctgaaccccaaccagtgtgactcagttcaggaggccagcgtacac
aaccagtcagaacctcgctccagcaagtccaaccaagacgaaggctctgacacctttgtg
gaagtgggcatgcccagaagcccatctcactcagccaatgggaacgagctaaaacagatg
ctggcttcctgtaagacgtcagggaaacggcatgcggtggagctcctccaggggaccaag
aactcccatctccagtatgtctgtccagagctacactcagactgcctcctgtcagaccca
gagtcgagtgcttcagacggccctgtgacggataagagggcgccgggcagtgagcgggca
gcagagagggcagcagagagggcagcacagcagaatgaaagggacaggatccgcttggca
ccacattcctcctttgccaacatgcaggtacaactagaggcgcttgaatatgaacagaaa
aagctgttagcaaccaaagctatgttgaagaagcctgttgtgactgaggtacggacccca
actaacacgtggagtggtctgggtttttccaagtccatgccagcggagaccatcaaggag
ctgcgcagggccaaccacgtttcttacaaacccacaatgagtaccacctacgaggtaaac
tctgactatgagggctcccccctgtccctgtcccgctccggcagcagagagggtgtgggc
aacggcagtgattctgacaactggagggacaggaacggggttgggaacggtcttgtcaac
cacgccgaattcccagcgtctgttagcagtcccaagaggaagcagaacaaatctgctgca
gagcactatctgagcagcagtaactacatggactgtatctcctcggtcaccgggagcaat
ggctgcagtctccagtcctctctcaaagggtcggacctgccggagctgttcagcaagctg
ggcctggggaaatacacagacgtgttccaacaacaggagatcgatctccagaccttcctc
actctgacagaccaggacctgaaagagctgggtatcaccacattcggagcacgcaggaaa
atgctgcttgccatctcaggtgtgaatgactatgaactgaacaagaaccgaaggaagctg
tttgagcctcctatcaggtcctccttcctggaagggggcgccagcgggcgtctgtctcgt
cagttccacgctgacatggccagtgtcagtggccggtggtag

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