Oncorhynchus keta (chum salmon): 118369417
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Entry
118369417 CDS
T09424
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118369417
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118369417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
DUF4472
Motif
Other DBs
NCBI-GeneID:
118369417
NCBI-ProteinID:
XP_052354633
LinkDB
All DBs
Position
36:22938491..23031311
Genome browser
AA seq
2047 aa
AA seq
DB search
MGSEVFMPLLEQFLLTPLVAWVKAAGHSSGNDGTKLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDSTLRIQNLSILIRQIKSYYQETLQQLVMMPLPNVLVLGRNPLSEQGLEE
MRKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLDGGE
LPPEDLDSFSRNMAFHLKRIVDERDDQLETIVELTQERDCGLYSPQPFCAQSPNDSPSMR
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMENENKRVQQESLQLLSD
ARSARAYRDELDALREKAVRVDKLESEVGRYKERLYDIEFYKARVEELKEDNQVLLETKA
MLEDQLEGTRARSDKLHELEKESLQLKSKIHDMEMDRDMDRKRVEELLEENLVLEMAQKQ
SMDESLHLGWELQQLSMTPDLTEVPQKSLGHEVNELTSSRLLKLEKENQTLLKTVEELRG
SASKHVPARLLKADKENQRLTQRLVQLESELNTERESLHSAEHLGTDLMKEKALLEKTLE
TLRENSERQVKGLEQENEHLTNTVSSLRQRSQVGPEARVKDVEKENRVLHESIRETSSKL
NKLEFERKQLRKDLAVYKEKGERTEELEVEAQRLERANEALQKRVASLGITCDKVASLEK
ENAELEAEGRRLKKNVEGLRSTSFQLEALEKENAQLDEENLKLRRAAEVLRSAGNKAAQL
ELENRELESERSQLKRSLELLKASSRKTERLEVSYQGLDTENQRLQKSLENSSRKIQQLE
GELQDVEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKQLEKENKRLRQ
QAEIRDSKLDEDNLRISHLEKENRSLGKEMTSFKDSCNRLKDLEKENKELVKQATIDKKT
LVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLQAEQSSDDDRYKLLEFKLES
TLKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEEERMVQSSPP
RGGEREDSQAVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALHTNLKQLETQS
SNLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGALMAQNAQLATQQSSTE
NEKEGAMRDREDLRSTYEMLLRDHEKLAALHERQASEYEGLIGKHGGLKSSHKSLESQHR
DLEDRYNQLLRQKDQLEELEKQLKSEQEKMLSENKSHEATAADYHKLKEENERLNMAHRQ
LVKDNEGLQADHKNLKSQMNGAKLEQTRMEAEFSKLKEQYQQLDITSTKLTNQCELLSQL
KGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEK
IMDQYKFYDPSPPRRRGNWITLKMKKLIKPRSRERMRSLTLTPTRSESSEGFLALPLDSQ
DSSSIGSGSNSLDDTLTHKRSSRKRDSQRVQHSLVQGNQGNQGSSNALKRLPFMRTRSKE
KDKEKAIYRRSMSMNDLLQTMALAGGQWAGSTENLEAPVETNGGSGARRMKGLGSMAYST
NAINYATLTLPSGSRAKRSLKIKDNASCEDVPASSDDPIGVKGQASRPSSLHSIKTISSN
SNNNSHFSPLQTKGTLNGNLSRPHSESSGEFSLSLDQEEWSSGSSPVQQPLSRSSHQSPM
LLRRSLDPQAAQARKKTSNSLGSASEVVSLQQFLEESTDPAESGSQENLTVESPRLSGGA
EHVQRDRAERGSTSCTGTKGRGILRSASGKAAPVHSDSRPPRGGQPGRPSLRKAESTRVK
GTVQPRVGLSSQSKAMSVSERLDISSTSFSTLPRASSVISTAEGSTRRTSIHDLLSKDAR
QPVSVDHSPSSKASPRTSTTPSEYPPTSNPSQHPNHQSIPLDPALVPLSLPKSVSMPCTG
SQQPPNSKETDLSSLESFFGKSFTVESVFMDSIFSEPTFTGAKSHTFLSLNTSLVSNISG
PPGKTHPQPNSVQTAQNQPNGQKSCPPDQNGEQEVIDTNHVLDADQSPSQPLSPEDQQSL
WYEYGCV
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgaggtttttatgccgttgctggagcaatttctgctcacgcctttggtcgcc
tgggttaaggcggctgggcattcatctggaaacgatggcaccaaactatcggaatacatt
gaattagtggatggcatttatttaaacgagatcatgcttgagataaatcctaaagccact
gttcaaagaaccaacaagaaagtgaacaatgactcaacactgcgcatacaaaacctctcc
atcctgatccgacagatcaagtcctattaccaggagaccctccagcagctggtgatgatg
cctctccccaacgtgctggtgctgggcaggaaccctctcagtgagcaaggactggaggag
atgaggaagcttttgttgctgttgcttggctgtgccgtccagtgtgagaagaaagaggag
tacatcgagaggatccagaccttagactttgacacaaaagctgccatagcatctcacatc
caagaggtgacccacaaccaggagaatgttgtggacctgcagtggctggatgggggcgag
ctgcccccagaggacctggactccttctccaggaacatggccttccatctcaaacgcata
gtggacgagagagacgatcagctggagaccatcgtggagctgacccaggagagggactgt
ggactgtactctccccagccgttctgtgcccagtcgcccaacgactcgcccagcatgcgc
cgcacagagagccggcagcacctgtctgtggagctggccgacgccaaggccaagatcaga
cgtctgcgccaggagctggaggagaagagtgagcagctgctggactgcagacaggaactg
gacaacatggaaaatgaaaataagagggttcagcaagagagcctgcagttgttgtcggac
gcccgttctgccagggcatatcgtgacgagctggacgctctgagggagaaggccgtcaga
gtggacaagctggagagtgaagtgggacgctacaaggagaggctctacgacattgagttc
tacaaagccagagtagaggagctgaaggaggacaaccaggttctgctggagaccaaggcc
atgctagaggaccagctggaaggaaccagggctcgctctgacaaactccacgagctggag
aaagagagcctgcagctcaaatccaagatccacgacatggaaatggaccgggacatggac
aggaagcgtgttgaggagctgctagaggagaacctggtcctggagatggcccagaaacag
agcatggatgagtctctccacctggggtgggaactacagcagctctccatgacccctgac
ctgacagaggtgcctcagaagtccctgggccacgaggtgaatgagctgacatccagccgg
ctactgaagctggagaaggagaaccagaccctgctgaagactgtggaggagctgagaggt
tctgccagcaaacacgtccctgcacgtctcctcaaggccgacaaggagaaccagaggctc
acccagaggctggtgcagctggagagtgagctgaacacagaacgggagagtctgcacagt
gcagagcatcttggcaccgacctgatgaaggagaaggctctgctggagaaaaccctggag
acgctgagggagaattcagagagacaggtgaaaggcctggagcaggagaacgagcatctg
accaataccgtctcgtcgctgaggcaacgctcccaggtgggccctgaggcgcgggtcaaa
gacgtggagaaggagaaccgcgtgctgcacgagtccatccgggagaccagctccaagctc
aacaagctggagtttgagcgtaagcagctgcgtaaggacctggcggtgtacaaggagaag
ggcgagagaacagaggagctggaggtggaggcgcagcggctggagagggcgaacgaggcc
ctgcagaagcgagtagccagcctgggcatcacctgtgacaaggtggcgtctctggagaag
gagaacgcagagcttgaggcagagggccgtcgtttgaagaagaatgtggaaggcctgcgg
agcacctccttccagctggaggccctggagaaggagaatgcccagctggacgaggagaac
ctgaagctccgcagggctgcagaggtgctccgctcggccgggaacaaggcggctcagctg
gaactggagaaccgggagctggagagcgagaggagccagctgaagagaagcctggagctg
ctcaaagcctcctccaggaagacggagaggctggaggtgagctaccagggcctggacacg
gagaaccagcggctgcagaaatccctagagaacagcagccgcaagatccagcagctagag
ggggagctgcaggacgtagaacaggagaaccagagtctgcagaggagtctggaggaactg
aagatctccagcaaacgtctggagcagctggagcaggagaataagactctggagcaggag
agctctcagctggagaaggacaagaagcagctggagaaggaaaacaagaggctgagacag
caggcggagatcagggactccaagctggacgaggacaacctgaggatcagccacctggag
aaggagaaccgctcactgggcaaggagatgacctccttcaaggactcctgcaaccgcctt
aaagacctggagaaggagaacaaagagctggtcaaacaggccactatagataagaagacc
ctggtcactctgcgagaggaactggtgagtgagaaactgcggactcagcagatgaacaat
gatcttgagaaactgacccatgagctggagaagataggccttaacaaggagaggttgctg
caggccgagcagagctctgacgacgacaggtacaagctgctggagttcaagctagagtcc
actctcaagtcttctctggagatcaaggaggagaagatagctgccttggaggccaggctg
caggagtcctctaacctcaaccaacaactgcgccaggagcttaaaactgtgaagaagaac
tatgaggccctgcgacagagggaggaggaggaggagaggatggtgcagagctcacccccc
agaggaggggaaagggaggactctcaggccgtcaacaagtgggagaaggagagccacgag
accacccgggaactgctcaaggtcaaagaccgcctcattgaggtggagaggaacaatgcc
accctccaggcagagaagcaggccctgcataccaacctgaagcagctagagacccagagc
agtaacctgcaggcccagattctggctctgcagagacagactgcatctctacaggagaac
aacaccacactacagacccagaacgccaaactacaggttgagaactcaacgctgaactct
cagagtggcgctctcatggcccagaatgcccaactggcgacgcagcagtccagtacggag
aacgagaaggagggggcgatgagggacagggaagacctgaggtccacctatgagatgctg
ctaagggaccatgagaaactggctgccctgcatgagagacaggcctccgagtacgagggc
ctcatcggcaaacatggaggcctgaaaagttcccacaagagtctagagtcacagcacaga
gacctggaggacagatataaccagctgctgaggcagaaggatcagctggaggagctggag
aaacagctgaagtcagagcaggagaagatgctgtctgagaacaagagccacgaggccacg
gctgcagactaccacaaactgaaggaggagaatgaaaggctgaacatggcacaccgtcag
ctggtgaaggacaatgagggcctgcaggccgaccataagaacctgaagagccagatgaac
ggtgccaagctggaacagacccgcatggaggcggaattctccaaactcaaagagcagtac
cagcagctggacatcacctccaccaagctcactaaccagtgtgagttgctgagtcagttg
aaagggaacctggaggaggagaaccgtcacctgctggaccaaatccagaccctgatgctg
cagaaccgcaccctgctagaacagaccatggagagcaaggacctgttccacgtagagcag
agacagtacatagacaagctgaacgagttgaggagacagaaggagaagctggaggagaag
atcatggatcagtataagttctacgacccctcacctccacggagacgggggaattggatc
accctgaagatgaagaagctgatcaagccgaggagtcgggagcggatgcgttccctgacg
ctgactcccacgcgctccgagtccagcgagggcttcctggcgcttcctctggacagccag
gactcctcctccataggctctggctccaactccctggacgacacgctgacacacaagagg
agcagcaggaagagagactctcagagagtgcagcattcccttgtgcagggtaaccagggt
aaccagggttcctctaatgctctgaaaaggttgccctttatgaggaccagatcgaaggag
aaagacaaagagaaggccatctaccgccggtccatgtctatgaacgacttgctacagacc
atggcgctggcggggggtcagtgggcaggcagcacagagaacctggaggcgcccgtcgag
accaacgggggcagcggtgcccggcgaatgaaagggctgggttccatggcctactccacc
aatgctatcaactacgccacactcaccctgccttcaggcagcagggccaagaggagcctg
aagatcaaagacaacgcttcctgtgaagatgttccagcatcctcagacgaccccattggg
gtcaaagggcaagcctccagaccctccagcctccatagtatcaagaccatcagtagtaat
agcaataataactcccacttctctccactccagaccaaaggcacattgaacggaaacctc
agcaggccccacagtgagagcagtggggagttcagcctcagtctggaccaggaggagtgg
tccagcgggagcagccctgtccagcagcccctgtctcgctcctctcaccagagccccatg
ctgctgcggaggtccctggacccccaggccgcccaggccaggaagaagacgagcaactcc
ctgggcagcgccagtgaagtggtctctctacagcagttcctagaggagagcaccgaccct
gcagagtctggcagccaagagaatctgaccgttgagtctccccgactctctggaggcgct
gagcatgtgcagagggaccgggctgagcgaggctccacctcctgcaccggcactaagggg
cggggcatcctgcgctcagccagtgggaaggcagcgccagtgcactcagacagccgcccc
ccaaggggtggccaaccaggtcgtcccagtctacggaaggcagagagtacgcgtgtgaag
ggcacggtccagccccgggtcggcctctcctcccagagtaaagccatgtctgtgtctgag
cgtctggacatctcctccacctccttctccacgctgccccgggccagcagcgtcatctcc
acagctgagggctccacgcgtcggaccagcatacacgacctgctgtccaaagacgcccgg
cagcccgtgtctgtggaccactcaccctcctcaaaggcctcgcctcgcacctccaccacg
cccagtgagtaccccccaaccagtaacccctcacaacaccccaatcaccagtccatcccc
ctagacccagccctcgtgcccctgtccctgcccaagtcagtcagtatgccctgcacgggc
agtcagcaaccccccaatagtaaggaaactgatctctctagcctggagtccttctttgga
aagtccttcacagtagagtcagtgtttatggactccatcttcagcgagccaaccttcaca
ggggccaagagccataccttcctctccctcaacacctccctggtcagtaacatcagtggt
cccccaggcaaaacccacccccagcccaactctgttcaaactgcccagaaccaaccaaat
gggcaaaagtcctgcccacctgaccagaatggggaacaggaggtaattgacaccaatcat
gtgctcgatgctgaccaatccccatcccaaccccttagcccagaggaccaacaatcattg
tggtatgagtatggctgtgtctga
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integrated database retrieval system