Oncorhynchus keta (chum salmon): 118369484
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Entry
118369484 CDS
T09424
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03430
Mismatch repair
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118369484 (mlh1)
03460 Fanconi anemia pathway
118369484 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118369484 (mlh1)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118369484 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118369484
NCBI-ProteinID:
XP_035609790
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Position
36:complement(4582946..4597469)
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AA seq
725 aa
AA seq
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MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIVESVQKQIESKLLGSNSSRTYFTQTLLPGLSVSASEGKSSS
NSTGDGERVYAHQMVRTDSRAQKLDAFLQPASKLAPTPTANPNGQSRGESVTTNDMEEMD
NAEILEEQAPGATEDGEGTSRNTPADLPRKRPRAGEDEEQENLTAAATTKRRAIKLSSVK
ELRDDITEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECSQFYSIR
KQYVLELEPGEEEQDAELNSWRWKVEHLLFKSFRSLFSPPKHFSEDGSVLQIANLPDLYK
VFERC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaagac
aatggcactggcatcaggaaagaagatatggagatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcgacctatggtttccgaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgcgatgggaaactaaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcaccgcggaggatctgttttataacgtgtccaccaggagg
aaagcactgaagagccccagtgatgagtactccaggattgtggaggtggtgagcaggtat
gccatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggctgac
gtcaggaccctacccaacgcctccatactggataatatccgtgtggttttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctccaatgccaactactcagtgaagaagtgcatcctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaatgtccacccgaccaaacacgaggtgcacttcctccacgaagactgtatcgtc
gagagcgttcaaaaacagatagagagcaaactcctgggctccaactcctcacgcacgtac
ttcacacagacattgctgcctgggctgtctgtctccgccagcgaggggaagtcttcctcc
aactccacaggggacggtgagcgggtctacgcccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcgtccaagctggcccctactcccaccgcc
aaccctaatgggcagagcaggggggaatctgtgaccaccaatgatatggaagagatggac
aacgcagagatcctggaggaacaggcgccaggtgccacagaggatggggagggaaccagc
cgaaataccccagctgatctccccaggaagcgtccccgtgccggtgaggacgaggagcag
gagaacctgactgctgcagccacaaccaagagacgagccatcaagctgagcagtgtgaag
gagctgagagatgacatcactgagcacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccaggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcaccactctatgacctggccatg
ctggctctggactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctg
gcccaatacatagtcgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatcgaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagacttcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagctggagccgggagaggaggagcaggatgcagagctgaactcg
tggcgttggaaggtggagcatctcctgtttaaatccttccggagcctcttcagtcctccg
aaacacttcagtgaggatggcagcgtactccagattgctaatctaccagacctctacaaa
gtatttgagcgatgctaa
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