Oncorhynchus keta (chum salmon): 118369488
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Entry
118369488 CDS
T09424
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118369488 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118369488 (herc4)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118369488 (herc4)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
HECT type E3
118369488 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Glyco_hydro_129
DUF4980
Motif
Other DBs
NCBI-GeneID:
118369488
NCBI-ProteinID:
XP_035609798
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All DBs
Position
36:4691157..4718233
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AA seq
1050 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVVEPRKCDFFHGKQVCDIGCGRRHTTFLLGDGTVYTCGC
NDIGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVFAWGLATDGQLGLAN
FEECVRVPRNIKSLSDVEIAQVACGYRHSHALSRGGQVYSWGQNRYGQLGLGVAGQGIST
PQVIQSLQGIPFIQISAGGAHSFALTFSGAVFGWGRNKFGQLGLNDNNDRYYPAQLKSLR
TQRVSYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTTNHEINPRKVFELMGNVVTQIS
CGRQHTLAFIPSSGKMDSFGLGGNGQLGTRSTSNRNSPAPVKGPWVAYNGPTPTIADMEQ
GCCVKRIYAGGDQSFAHCYTPQNPLVPDDIRIPDPRRHICTLSADLTQRWLNHYTHGRLP
QEISNEIDLVFSSASCLNGSFLAGSHPDHYNTSSKCSGVDMNMARLLFHRVVQHDYPEIA
QQIAASLEKNLIPRLSSSPPDIEALRLYLTLPECPLFSDPNTYVTLAIPFAKALISLKEA
PLKVLGNWWSQFEAPVFQRLVELYKVVVVYLLKMHKVGVPHSEQRVFTCFLDTALKLLEI
LHAVNERAGHIIQYDKFYIHELDDLIDIRNDYITWIQQQMYSMAHDSAVTLCKYPFVFDA
QAKTTLLQTDAVIQMQMAVDQAQRQNFSSMFLPVVESVNPCLILIVRRENIVGDTMDVLR
KSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFANK
TFEDIDLFHLTGVICGLAIYNLTIVDLHFPVALYKKLLKRNPTLDDLKELMPDVGRSLQQ
LLDYTDDDVEDTFCLNFTVTVENFGATEVLELVPNGMDICVDNSNRPEFVSAYVDYIFNK
SVAALFESFFAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKSTEYKGEYWAENP
TIKFFWEVFHDLSLEKKKLFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFN
LLDLPKYSSRETLQNKLLQAIDHNQGFNLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggaaatgcttccttcggtcagctaggtttgggcgggatcgatgaggag
attgtggtggagccccggaaatgtgatttctttcatgggaagcaggtgtgtgatatcgga
tgtggccgacggcacaccacatttctactgggagacgggactgtgtacacctgtggctgc
aatgacattgggcagctgggccacgagaagtctcgaaagaaaccagagcaggttgtggca
ctagatgcacagaacattgtggcagtgtcatgtggggaggcccatacactcgcactgaat
gacaaaggacaagtgtttgcatggggcttggccacagatggacagctgggccttgcaaac
tttgaagaatgtgtacgtgtgcccagaaacatcaagagtttatcagatgtagaaattgct
caggtagcctgtggatatcggcactcccatgctctgtctagaggaggtcaagtctattca
tggggacaaaaccgatacggacaactagggctgggagtagctggacaaggcatctctact
ccccaagtcatccagtctttacaggggattcccttcatccagatctcagcagggggtgct
cacagctttgccctcacattctcaggggccgtatttggctgggggcgcaacaagtttggg
caactcggcctcaatgacaacaatgatcggtattatccagcccagctcaagtccctcagg
acacagagggttagctacatctgctgtggggaggaccacactgccgcacttacaaaggaa
ggaggtgtgtttacatttggagcaggagggtatggccagcttggacataacactacaaac
catgagatcaaccccaggaaggtgtttgagctcatgggaaatgtagtcacacagatatcc
tgtggaagacagcacactctggccttcatcccctcctctggaaagatggattcatttggg
ctgggagggaacgggcagctcggtacacgctccacatccaacaggaacagccctgcccca
gtcaaaggcccctgggtggcctacaatggcccgacgcccacaatcgcagacatggagcag
ggctgctgtgttaagaggatctatgctggaggggaccagagctttgcccactgttacact
ccccagaaccctctggtgcctgacgacatcagaataccagatcccagaagacacatatgc
accttatctgctgatctcactcagagatggctgaaccattacacacacggaagactccca
caagagatttccaacgagattgatcttgtgttttcctctgcaagttgcctcaatggaagc
tttctggctggcagccatccagatcactacaacacgagcagtaaatgctcaggggtggac
atgaacatggctcgcctcttgtttcacagagtcgttcaacatgactatccagaaattgca
cagcagattgcagccagtctggaaaagaacctgattcccagactaagcagctcccctcca
gacatcgaggcgctgagactctacctcaccctgccagagtgtcctctcttcagcgaccca
aacacatatgtgactctggccatcccttttgccaaggcactcatcagtctgaaagaggct
ccactgaaggtgcttggcaactggtggtctcaattcgaagccccagtcttccagaggctt
gtggagctgtataaggtggtggtggtttacctgctgaagatgcacaaggtgggagtcccc
cactcagagcagagggtcttcacctgcttcctggacacggcactcaagcttctggagatc
ctgcacgctgtgaacgaaagagccggacatatcatacagtacgacaaattctacattcac
gagttggatgacctgatagacatccgaaacgactacatcacatggattcaacagcagatg
tactctatggctcatgacagtgcggtcaccctctgtaagtacccctttgtgtttgatgcc
caggcgaagaccaccctgcttcaaactgatgctgttattcaaatgcagatggcagtggac
caggcacagcggcaaaacttcagctccatgttccttcccgtggtggagtctgttaacccc
tgcctcatcctcattgtgaggagggagaacatcgtcggggacaccatggatgtcctcagg
aagtccaagaacgttgactacaagaaacctctgaaggtgatctttgttggagaagaggcg
gtagatgcagggggtgtgcggaaggagttcttccttctcatcatgagagagctcctggac
cccaaatacggcatgttccgatactacgaggagtccaggctgatctggtttgcaaacaag
acgtttgaggacattgacctgttccacctcaccggggtcatctgtgggctggccatctac
aacctcaccatcgtggacctccacttcccagtggccctgtacaagaagctgctgaagagg
aaccccacgttggatgatcttaaggagctgatgcctgatgtggggaggagtctgcagcag
ttactagactacacagacgatgatgttgaagacacattctgcttgaacttcaccgttaca
gtggaaaactttggcgccacagaggtcttagaactggttccaaatggcatggatatctgt
gttgacaactcaaacaggcctgagtttgtctctgcatacgtggactacatcttcaataaa
tcagtggccgcgcttttcgagtcctttttcgcaggcttccacaaagtgtgtggtggcaaa
gtcctggagctgttccagcccaacgaactgcaggccatggtcattggcaacaccaactac
gattggaaagagcttgaaaagagcactgagtataaaggagagtattgggctgaaaatcca
accattaagttcttctgggaggtgttccacgatctctctttggagaagaagaagctcttt
ctcttgtttctcacaggaagtgaccgcattcccatcctgggcatgaaaagcctgaagctg
gtgatccaacccacgggaggcggggaacactacctgcccgttgcacacacctgcttcaac
ctattggacctgcccaaatacagcagccgggagacgctccaaaacaagcttctccaagcc
atagatcacaatcaaggtttcaacctggcctaa
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