KEGG   Oncorhynchus keta (chum salmon): 118369536
Entry
118369536         CDS       T09424                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118369536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118369536
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118369536
 Complex B
    118369536
SSDB
Motif
Pfam: Surp cwf21 CID CTK3
Other DBs
NCBI-GeneID: 118369536
NCBI-ProteinID: XP_052355812
LinkDB
Position
4:complement(10071401..10102499)
AA seq 646 aa
MIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKLYSILQGEAPTKWRTDE
YRMFKNGSLWRPPPLNPYLHGNFEEGEEPEEEEEEPGKKGCLKEEERDQLEELLRGLTPR
KGDIAEAMLFCLSHAEAAEEIVECVTESLSILKTPLPKKIARLYLVSDVLYNSSAKVANA
SYYRKYFEAKLCQVFSDLNATYKSTQGHLQSENFKQRVMSCFRAWEDWAVYPDPFLIKLQ
NVFLGLVNLSAEEAASTPITVEKLPFEHLAPSLLAQNEPVEDIDGAPIGEDMDGAPLEDV
DGVPIGLDGAAAVPGAPLDGASLGLDDLDGVPVKAPEEDIDGLPLDRAAAKAASFKVAPS
KWEAVDESELEAQAVTTSKWEIFEQPEEENKDEDDSDDEDTKSSRSEEPPSYSNPIRDDL
DSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKRPKKSGQSLQEQVEHYRTKLLHKEK
EKEKLEREKEREKEREKKDKEKSEARLKDAKKEKEESTPTRRDRRGLSPVVAKKRRHSGS
PGSPPRSSSSRRARSPSPRSERSERSERSDRSYSKDVASSRSRSSHKDSPRVTSSKKLSK
RSPSLPRTPKRSRRSRSRTPKKSAKKSRSKSRSPHRSHKKSKKSKH
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgatcgagtttgtggtgcgcgagggccccatgttcgaagccatgatcatgaatcgagag
ctcagcaatcccatgtaccggtttctgtttgagaaccagagcccagcacatgtgtactac
cgctggaaactctactccatactacagggagaagcgccaacaaaatggcggacggacgaa
taccgcatgttcaagaacggctcgttgtggcgccctcctcccctcaacccctacctacat
ggcaactttgaagagggggaggagccagaggaggaagaggaggagcctgggaagaaagga
tgcttaaaagaagaagagcgtgatcagctagaagagctgttgagaggcctgactcctagg
aagggtgacatagcagaggccatgttgttctgtctgagtcatgccgaggctgcagaggag
atcgtagagtgtgtcacagagtctctctccatcctcaagacaccactccccaagaagatt
gcacgtttatatcttgtgtctgatgtgctgtacaactcgtctgctaaagtagccaacgcg
tcgtactacagaaaatactttgaggccaagctctgccaggtcttctcggacctcaatgca
acatacaagtcgacacagggtcacctccaatcagagaacttcaagcaacgagtaatgtcg
tgtttccgtgcgtgggaggactgggccgtgtacccagatcccttcctcatcaagctacag
aacgtcttcctgggtctagtcaacttgtcagctgaggaggcggcttccactcccatcaca
gtagagaaactgccgtttgaacatctggcccctagtctgttggcccagaatgagccggtg
gaggacatcgacggggcccccattggggaggacatggatggggccccactggaggacgta
gatggggttcctataggactggacggggctgccgcggtgcccggcgcccctctagacgga
gcttccctggggctggatgatctggatggagtgcccgtcaaagccccggaggaggacata
gacggactgcccttggatcgtgctgcggccaaagctgcatcctttaaagtagccccttca
aaatgggaagcagtggacgagtctgagctggaggcacaggccgtgaccacctcaaagtgg
gagatctttgagcagccagaggaggagaataaagacgaggacgacagtgatgatgaggac
accaagagttctcgttcagaggagcctcccagttactccaaccccatcagagacgacttg
gactccaagaccaagcactctgagatgaatgaggacagacgcaccaagctacgggagata
gaggtcaaagtgatgaagttccaggacgagctggagtctgggaaaaggcccaagaagtct
ggccagagtctccaggaacaggtggaacactacagaaccaaactgttacacaaggaaaaa
gaaaaggagaaactggaacgagagaaagagcgggagaaagagagggagaaaaaggataag
gagaaaagcgaagctcgtttaaaagacgccaagaaggagaaggaggagtctactccgacc
aggagagacaggcgcggtctgtctcctgtggttgctaagaaacggcgtcacagcggctcg
cccggcagccccccgaggagcagcagcagcagacgtgctcgctccccgtccccccgctcg
gagaggtcagaacgttccgaacgctcggaccgctcctactccaaggacgtagcgtcgtca
cgatcccgatcctcccacaaagactccccccgcgtcaccagcagcaagaagttgtccaaa
aggtctccctctttaccccgcacgcccaaacggtccaggagatcgcgctccagaacaccc
aagaaatccgctaagaagtcacggtcaaaatcacggtctccgcatcggtcccacaagaaa
tcaaagaagagcaaacactga

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