Oncorhynchus keta (chum salmon): 118369663
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Entry
118369663 CDS
T09424
Name
(RefSeq) nucleoporin p58/p45-like isoform X2
KO
K14307
nucleoporin p58/p45
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118369663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118369663
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118369663
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
YcaO_C
Nup49_C
PSY3
FapA
Motif
Other DBs
NCBI-GeneID:
118369663
NCBI-ProteinID:
XP_035610120
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All DBs
Position
4:complement(13497776..13516962)
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AA seq
559 aa
AA seq
DB search
MSGFNFGSGSTNTGGGFSFGGTASTPAAAVMGGFTLGGTASTTTTTSSLGLGGSLFAQKP
TGGFSFNTPASGAPAASTTGFSMAFNKPSASAQPFSLTAASSAPSGAGLTLGSVLTSTAP
QQGATGFALNLGGVAPSTGLSLGSSMFSNMASTGLAQTTLGSGGLTLGSLVSTSTAISTA
PSFGLGGVDFSTSSEKKSDKSLGASPQDSKALKDENLPPVICQDVDHFQKFVKEQKQVHE
EISRMSSKAMLKVQDDIRSLKQLLSVSASGLQRNALAIGHLKMEAALELKNADIALRTQK
TPPGLQHENTAPYDYFRCLVDQFEVQLQQYRQQIEELENHLSTQGSGSHITPQDLSLAMQ
KLYQTFVCLAAQLQSVHENVKILKQQYLGYRRAFLEDSTDVFESKRAASKKWKSAPRITI
GPAPFGSVPNAAAVAMAATLSQQQPGPGRQAPLGSGLGNPFASGVGSSTSSSGLGVFVGG
PGFGGVATGGTFGFSSASKASGGSLSAGFGSSSSSGFNFSNPGLNASAGLTFGVSTGFGT
GGPLLQLKKPPVGNKRGKR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcgggtctggatccacgaacactggcggagggttttcgtttgga
ggcactgccagtaccccagctgcagcagttatgggtggctttactctgggtggtacagcc
tccaccaccaccaccacctcttctctgggcctgggggggtccctgttcgcacagaaacct
actggggggttctcctttaacactcctgcctcaggtgccccagcagcctctaccacaggc
tttagtatggccttcaataaaccgtctgcctcggcccaacccttctccctcactgctgcc
tcctcggccccctcaggggcaggactgacgctaggctccgtcctcacctccaccgctcca
caacaaggagccacaggatttgctctcaacctagggggtgtggccccatccacaggccta
tcgttgggttccagtatgttctctaacatggcttctactggtttggcccagaccactctt
ggttcaggggggttgacgttaggttccctagtctctacttcgacggcgatctcaacagcc
cccagctttggactgggcggagttgacttcagcacttcctcagagaaaaagagcgacaaa
tcattaggggccagcccacaggacagtaaagcgttgaaagatgaaaacttgcctccagtc
atctgtcaggatgtagaccatttccagaagtttgtgaaggagcagaagcaggttcacgag
gagatcagcaggatgtcatctaaagccatgctgaaggttcaggacgacatcaggagtctc
aaacagctgctgtctgtcagcgcctcgggactacagagaaacgccctggctataggtcac
ctgaagatggaggctgcgctggagttgaagaatgcagacatagctctacggactcagaag
acaccccctggactccaacatgaaaacacagctccctatgattatttccggtgtttagtg
gatcagtttgaggtccagctgcagcagtacagacagcagatagaggagctggagaatcac
ctctccacacagggcagtggatcacacatcacaccacaggatctgtctctggccatgcag
aagttgtaccagacatttgtttgtctggctgctcagctccagtcagtacacgagaacgtc
aagatcctgaagcagcagtacctgggataccgccgggccttcctggaggactccactgat
gttttcgagtccaagcgggcagccagtaagaagtggaagagcgctccacgcatcacaatc
ggtcccgccccgttcggcagtgtccctaacgcagcagcggtcgccatggcagccacgctg
agccagcagcagcccggcccagggagacaggcgcccctggggtctggcttgggaaacccc
tttgcctcaggagtgggctctagcacgagctcatcgggccttggagtatttgttgggggt
ccaggtttcgggggggttgcgacggggggcacatttggtttctcctccgccagcaaggcc
tcgggagggagcctgagcgcaggttttggtagcagcagtagttcggggtttaacttcagt
aaccccgggctaaacgcgtctgccggcctgacgtttggcgtgtccacgggcttcggaacg
ggaggtcccctgctacagctcaagaagcccccggtgggaaacaagaggggcaagagatag
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