Oncorhynchus keta (chum salmon): 118369679
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Entry
118369679 CDS
T09424
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118369679 (zswim8)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
118369679 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
118369679
NCBI-ProteinID:
XP_052354479
LinkDB
All DBs
Position
36:13569976..13603494
Genome browser
AA seq
1972 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMLKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPHRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDPPEPGGGRSGSSEGGGGDYKGRSL
QQEVAVRPKETIVSKRKGLSAGGGGGVLVRLGGSVSLSLEEGSSKGMYKGAGSSSSTGSK
AKLAQGGKSSSGGSGVVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNTF
DFTPPPPEMLPSPSPLLREPHKYSGGGKGAGNTPKERAFEGKRATLAATLPATESQPAFP
TKENAAVIVEAAIAVVNVEAEMNGNEEAAIAGDAQPSTSVVTVTAAAAQSPHDGRRETGT
GAVALPNQAPEGVAGAGGDPVGEDDYQAYFLNSANEEGAERVSENNNEEEPDIFAGIKPL
EQEGQMEVLFACAEALHAHGYSNDACRLAVELAGDLLANPPDLKVEQPQTKGKKSKVSTS
RQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKLAYQESE
VVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSR
PPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKD
DQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHTAHGHGGATGGVSKHA
PNATAAAGSSSSSLQAVAAGGAAGQQAGLAGSGVQNNSTAGECVSEARERADGLQPSSCD
QPSEAVPFKPEGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAPETTSDSSP
TLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKG
RRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHL
CAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEV
ASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVRYSSVLQKT
HRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQREGPGRC
GANGGAGRRPPEMGHGVMDNIGNMDSSGVATVTASVTAAAVVPVISVGSTIYQSHALPGS
AMAHPHTQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPVSGGAYPQCVCVPSQGM
HPAFIGAQYPFSVATGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTETGLPLSTTVAGAA
SFSPFYPVGGVHSGATIQAIQGSSLPGMSSQPVSLVSAPFPSEDEQHSQPISQQGLHYLH
SAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAKG
VLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYD
DFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggagagaggttctccttcgaagattctgac
cggttcgaggaggactcgctctgctccttcatatcagaggctgagagtctgtgtcagaac
tggaggggatggagaaaacagtctgctggaccaaattctcctacagtgaagattaaagat
ggtcaggtcatccctctggtggagctatcagccaagcaggttgcattccacatcccgttt
gaggtggtggagaaggtctaccctcctgtccctgagcagctgcagctccgcatcgcctac
tggagcttcccagagaatgaggaggacatccggctgtactcgtgtctggctaacggcagc
cctgatgagttccagcgaggggagcagctgtacaggatgagggctgtcaaagaccctctg
cagataggtttccacctcagtgccaccgtggtgtcgccccaggctggccaatcaaaaggg
gcgtacaatgtggctgtcatgttcgaccgctgccgcatcacttcctgcagttgcacctgt
ggagccggggccaagtggtgcgcccatgtggtggccctctgcctcttcaggatccacaac
gcgtctgcagtgtgcttgcgagcccccgtgtcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctcatcagtgagcttccccaacagattttgcccaca
gcccagaggcttctggatgagctcctgtcctcccagtccacagccatcaacacagtgtgt
ggggctcccgaccccactgctggcccctcagcctctgatcagagcacctggtatttagat
gagtctacgctcagtgacaacatcaagaagactctgcacaagttctgtggcccctctcct
gttgtcttcagtgacgtcaactccatgtacctgtcatccacggagcctccggcggcggca
gagtgggcatgtctgctgaggccgctgagggggcgggagcccgaggggatctggaacctc
ctttccatcgtcagggagatgctcaagaggagagacagcaacgctgcacccctactagag
atcctcactgagcagtgtctcacttatgaacagatcattggctggtggtacagcgtgcgt
acttcggcatcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtcagag
gtggcagcccacgcctgcgccagcatgtgtgatgagatggtcgttctgtggaggctggct
gtcctagaccccaccatgagccctcatcggcgtttggagctggctgcccagctcaagcag
tggcatctgaaagtgattgagatcgtgaagcgaggacaacaccgcaagtccctggacaaa
ctgttccagggcttcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgcagacaagaagagcgcttccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacccccctgaacct
ggaggagggagatctggcagctctgagggaggtgggggagactacaagggcagaagtctc
caacaagaagtggcggtcaggcccaaagagaccatcgtgagcaagaggaaggggttgtcg
gctgggggcggaggaggggtcctagtgcggctagggggcagtgtgtctctctctctagag
gagggcagtagtaaggggatgtacaaaggcgcaggttcctcctcgtccactgggagcaag
gctaagttagcccaggggggcaagtcgtcctctgggggatcaggagtggtagggggaaaa
caccaagcggccaagcggcgcaccagcagtgaggacagctccctcgagcctgacatggcc
gagctgagcctggatgatggctccagtctggcgctgggtgctgaggccagcaacaccttt
gacttcacgcccccgccgcccgagatgctgccctcaccaagcccgctactcagagagcca
cacaaatacagtgggggagggaaaggggccggaaacacgcccaaggagcgtgccttcgag
ggcaaacgggccacccttgctgccaccctgcctgccactgaatcccagcccgccttcccc
accaaagagaacgctgctgtcatcgtggaagcagccattgccgtggtgaatgtggaggcg
gagatgaatggaaatgaggaggcggccatcgctggagatgctcagccttctacctcggtt
gttaccgtgactgcagctgccgcacagtcaccgcatgatggccgccgagaaactggcact
ggagccgtagcactgcccaatcaggccccagagggagtagcaggggcaggaggagaccct
gtaggagaggatgactaccaggcctactttctgaattcagctaatgaggagggggcagag
agagtgtcggagaacaacaatgaggaggaaccagacatctttgctgggatcaagccactg
gagcaggagggccagatggaggtgctgtttgcgtgtgcagaggcactccacgctcacggc
tacagcaacgatgcctgcagactggcagtggagctggccggagacctgctggccaaccct
ccagacctgaaagtggagcagccccagaccaagggcaagaagagcaaggtgtccaccagc
aggcagacccaggtggccactaacacgttggttaagacctccttcctgctgacggtgctg
agcgagaggctggagctccacaacctggccttcagcacgggtatgttctctcttgagctg
cagaggcccccagcctccaccaaggccctggaggtcaagcttgcttaccaggagtcagag
gtggtggctctgctgaagaaaatccctctgggcctggtggagatgacgtccatacgggac
agggccgagcagctccgagatgggaacttctgtgactacaggcctgtcctgcccctcatg
ctggccagcttcatatttgatgtgctgtgtaccccagttgtgtcccccacaggttcccgt
ccgcctagccgtaaccggaacaacgagatgcctggagatgaggagctgggctttgaggcg
gctgtagcagcactgggtatgaagaccacagtgagcgaggcagagcatcctctgctgtgt
gaggggaccaggagagagaaaggagacttggctctggccctcatgattacatacaaggat
gaccagagcaagctgaaaaagatcctggacaagctgctggacagagagagccagacccac
aagccccagaccctgagctctttctactccagcaagccagctgccagcagccaaaggagc
ccgtccaagcacactgctcacggacacggaggtgccacaggaggggtgtccaaacatgcc
cccaacgccacagctgcagccgggtcctcctcctcctccttgcaagcggtggctgctggg
ggggcagcaggacagcaggcaggtctggcgggcagtggggtgcagaacaattccacagcc
ggagagtgtgtcagtgaggccagagagcgagcagatggcctccagccttcgtcatgtgac
cagccgagtgaggctgtcccattcaagccagagggcacagtgccgagccgcttggcgctg
ggaggacggggggcatacagcgggcgctgctggggctctcctgtccgccagaagaagaaa
cacacaggcatggcgagtatcgacagcagtgctcctgagaccacctcagacagctccccc
acccttagtcgacgcccgctcagagggggctgggctgcagcttcctgggggaggggccaa
gacagtgacagcatcagcagctcctcttctgattcgttaggctcctcctcatccagtggc
tctcgcagggctggaggcggagctagggcaaagagcacagacaccagcagatataaaggg
cgtcgtcccgagtgccatgcaccacatgtgcccaaccaaccgtcggaggcggcggcccac
ttctatttcgagctggccaagaccgtgctgatcaaagccgggggcaacagctccacctcc
atcttcacccagccctcagccagtggaggccaccaggggccccaccgcaatttgcacctc
tgtgcctttgagatcggcctgtacgccctaggcctgcacaactttgtctcacctaactgg
ctctccaggacctactcctcccacgtctcctggataacaggccaggccatggagatcggc
agtgctgccctcaacatcctggtggaatgctgggacgggcacctcacccctcccgaggtg
gcatcactggccgacagagcatcacgggcgcgggaccccaacatggttcgcgctgcggct
gagctggccctaagctgcctgccccatgcacacgccctcaaccccaatgagatccagagg
gccctggtgcagtgcaaggaacaggtacatgtccggtactcttcagttctgcagaagaca
catcggactactcatgacaacgtgatgctagagaaagcctgtatggctgtagaggaggca
gccaaggggggtggtgtgtaccctgaggttctgtttgaggtggcccaccagtggtactgg
ctctatgagcagacagtaggcggggggtcaggggcccagcgtgaaggcccgggacgctgt
ggggccaacggtggagctggaaggaggcccccagagatgggccatggtgtaatggacaac
attggcaacatggattcctccggcgtcgccacggtgacggcctcagtgacagcagcggct
gtggtgcctgtcatctctgtgggctccaccatctaccaatcacacgcccttcccggctcg
gccatggcccacccccacacccagggcctgcacccctacaccaccatccaggcccaccta
cccacagtctgcaccccccagtacctggggcacccactgcagcacgtcccccgccccact
gtattccccgtgtcagggggtgcctacccacagtgtgtctgtgtgccctctcagggaatg
cacccggcctttatcggtgcccagtacccgttctcagtggccactggcccccatccgccc
atggcagcgacagcggtcaccttccccggtgttcccgtgccgtccatgacccagatcgcc
gtccacccctatcacacagagaccggcctgcctcttagcaccactgtagcaggagccgca
tctttttcccctttctatccagtaggtggcgtccattcaggcgccacaatccaggccatt
caggggtcatctcttcctggaatgtcttctcagcctgtctcattggtcagcgcccccttc
ccatctgaagacgagcagcatagccagccaatcagccagcagggccttcactacctgcac
tcagcatacagagttggcatgctagcattggagatgctgggcaggagggctcacaacgac
caccccaataacttctcccgcagccccccatacacagaggacgtcaagtggctcctgggc
ctggctgcacggctaggggtgaactacgtgtaccagttctgtgtgggtgcggctaagggc
gtgctcagcccctttgtccttcaggagatcatcatggaggctctccagagactgaacccc
gcccacatccatgcccacctccgcacgcctgccttccaccaactggtgcagcgctgccag
caggcctacctacagtacatccaccaccggctgatccacctgaccccggccgactacgac
gactttgtcaacatcatccgcagcgcccgtggggctttctgcctgacacctgtgggcatg
atgcagttcaacgacgtgctgcaaaacctgaagaggggcaagcagaccaaggagctgtgg
cagcgcatctctctggagatggccaccttctccccatga
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integrated database retrieval system
