Oncorhynchus keta (chum salmon): 118369723
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Entry
118369723 CDS
T09424
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118369723 (cfap43)
Cilium and associated proteins [BR:
oke03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
118369723 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML
WD40
WD40_Prp19
Beta-prop_HPS5
CFAP43_N
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
118369723
NCBI-ProteinID:
XP_035610254
LinkDB
All DBs
Position
36:17164046..17178274
Genome browser
AA seq
1684 aa
AA seq
DB search
MLAVSCLAQLSLFSTFPEMDVLGNLEVRWAQGLTSQNVEFVDKKTACYICGNYIVFLNIE
TKIRSVLQCPGRGIGAFTANGHCRTLAFSNHKLNPSIFVYNYPELILKNELKGTAHVDYT
SLALSDAGPYLACCSSIPDHTITVWNWETGDPICNQPQAGKDITSLVFNPMNWLQICSLS
ASSCLTVWTIEKSDSFHIMKPGVIDLPATDGCLVEREINPSHVPTGILTYFGPQMPNSAI
AGLAEDRAETFVPKERIKTRLRPSTICWTASSELYVGCQEGHLLQVDPDSLAVSVLFNPS
AADDIPGFQQGSFQSLALHKDGLFVSGKENVLRCLKIKGNQVEVTQTWTLEEPATTIIYS
PDYETLLLASSTGRIYRYKRSQCEKVVKVLDVLSGDFVAAASLYTDNNLCVSVRDSGELQ
LWSLDAGFCIGSISLQVKVTSLACCPIAQYVAVGTVSGHVLFIELTREQQPRLVHRVHLY
YTPVDHLLFDQGGNFLITGASDANIYVLNARASRVFEVIGYTGAKGAIVSLSTQYSRDIK
QVKLLALCAGEKDIGRGEGSLLTLLTLPVQELTGAGVCADLRGCLSNNVLQRCTYEVPHA
LSSSALGANKIFGYCQKRKALQRFQLPESTERSSDQDVVQLTPEKEVEGHPMGPASVLLS
PHQSWLASVGQDGLLRIREISSLDRYVQMQCHSCWLGGVRKVSFTSDSQTMITTGLKDGS
MVCTRLRLKMAGVGKANAATQYSQSIAKYQESMITSENPILSSMADWDPEALSPPGSADL
HREEANDKRQIVDVTEQDESSTNLPSDTASDSTWLDNKLEAVINEEIQQFSQTKKSLRKN
VKQLRDTIQAMMRENETLPDMEKLEQQEFNLDVDEQKRLQAEGEQEVTRVRNEIELENLA
KCYLRDVLKRECWDSMKVKGQAIKAFHTEHEVKNYPMKERTQQELDELHRVESMRKIERA
DSNLQQEILEKKTKTTTEEEEEEEGREMESASLTGSLSAQYGGSNPYLYNQFNLHIREQK
INQITLLQDVIYKVKTAFNTDFKGVHKQKEQEINRVKDKNRRIMEIMSELDHKMKLWEPS
LSDNERPERALSVEDSEIHFEKYLTPEQRKREEEKKKEEEQRRQTAKSDNIRERALDEMM
GGVLELKKEDILRVEVPQPEFIVSKPDIQWTEEEKKIYKEYEKKAKELSEEQEKYRKTLE
AEMNKLQTSIMDSTQGFDETLTKLFERKVKSEMVIYQEELKITNLVHSILIEEEVLNRER
ELSLKLEKNRVYKNEIGEELKKHKEDVEMFRETYDNVVADDKLLDRGFRKEFFDVPGHLV
DQLYKLYKRRPRVQRMRTQADNSTSPFKERPLPGPVAAEGLCQMMKAMEELDAPENIPES
LDVSVWERFCLARRAKVESEQQVKVKALTLAEMQAFLQKRTDEDESARLEMKSLMDDING
LREEKTRFRLDIMVQILIKQGQVEVENGDFIADYSDSLLLHKSVVEDLNGTIRALGEQKI
ASMVECKDFRKGIIQQEWEHKRMRMQKEDLNNKARDIQMLRVSQELQEYLSETDHDNRIS
KQVSTLEKTITLQEKTHLKNVLTCKKLIKQLNRQAAMKASKNSALDEQLTNMQVTVAERR
HICEAIAMEENHESDAEERYQEIIQRKKLVELARAQAEEVATLRAEVERMRMKSFPALAQ
LKHN
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgttagttgtcttgcacagctcagtttattcagtacatttccagaaatggat
gtattgggaaatttagaagtcaggtgggctcagggtttgacaagccaaaatgttgaattt
gttgacaagaaaacagcctgctacatttgtgggaattacatagttttcctgaatatagag
acgaaaattagaagtgtgctgcagtgtcctggtcgaggtattggtgccttcacagcaaat
ggacattgcaggacacttgcattctccaaccataaactaaatccctccatatttgtgtac
aactaccctgaacttattctgaagaatgaactgaagggaacagcccatgtagactacaca
tctctggcactaagtgatgctggtccttatttggcctgctgctcatcaataccagaccac
accataacagtatggaactgggaaactggggatccaatttgtaaccaaccacaagctgga
aaagacatcacctctttggtgtttaacccaatgaactggctccagatttgctctttgagt
gcatcatcatgccttacagtctggaccattgagaagagtgacagctttcatataatgaaa
ccaggtgtgatagatctccctgcgactgatggctgtctggttgagagggagattaacccc
tctcatgtccccactggaatactcacctacttcggacctcagatgcccaactcagccatc
gcagggcttgcagaagacagggcagaaacctttgtgcccaaagagcgcatcaagaccagg
ctaagacctagcaccatctgttggacagcctcatcagagctctatgtgggctgtcaggaa
ggccacctgctacaggttgacccagactctctggctgtctctgtcctcttcaacccctca
gctgcagatgacattcctgggttccagcagggtagcttccagagcttagccctgcacaag
gatggactatttgtgtcaggaaaggagaatgtgctacgctgcttaaaaattaaggggaac
caagtggaggttacacaaacttggacattggaggaaccagccacaaccataatatattcg
ccagactatgaaacactgctcttagcttccagtacagggcgcatctacaggtataaacga
tcccagtgcgagaaggtggtgaaagtcctggacgttctcagtggagactttgtggcagca
gcttcactgtatactgataataacttatgtgtgtcagtgagggactcgggagagttgcag
ctgtggtctctagatgctggcttctgcatcggctctatatctcttcaagtaaaggtgacc
agtttggcctgctgtccgattgctcaatacgttgccgtgggaacagtgtcggggcatgtc
ctgttcattgagctgaccagggagcagcagcctcgtctggtgcacagggttcacctctac
tacactcctgtggaccacctactttttgatcaaggaggaaacttccttatcactggtgcc
tcggatgcaaatatatatgtgttgaatgcaagggcttccagagtatttgaggtaatcgga
tacacaggtgctaaaggagccatcgtgtccctgtctacccagtacagccgggatattaag
caggtcaaactgctggctctgtgtgctggagagaaggacataggccgaggggagggaagt
ctgcttacactgctcactctgcctgtgcaggagcttacgggggcaggagtgtgtgcagac
ctgagaggatgtctttccaataatgtcctacagcggtgcacatatgaggtccctcacgca
ctcagctcctctgccctgggagccaataagatctttggctactgccaaaagaggaaagca
ctccagagattccagctacctgagagcacagaaaggtcctctgaccaggacgtggtccag
ttgaccccagagaaggaggtggagggtcaccctatgggccccgcctccgtcctcctgtcg
ccccaccagtcttggctggcctcagtgggccaagacggactgctgcgcatccgggagatc
tccagtctggaccggtatgttcagatgcagtgccactcgtgttggctgggaggggtgagg
aaagtgtcctttacctcagacagtcagacaatgatcactacaggcctgaaagacggctct
atggtctgtacaagactaaggctgaaaatggcaggtgttggcaaagcgaatgcagctaca
cagtacagccagtctatagccaaataccaggagagtatgataacatcagagaaccctatt
ctcagtagcatggctgactgggacccagaggccctgtcccctcctgggtcagcagatcta
cacagagaagaggccaatgataagcgacagatagttgatgtgacggaacaggatgagagc
tccaccaacctgccctcagacacagcctcagactctacctggctggacaacaagctggaa
gcggttatcaatgaggagatccagcagttttcacagacaaagaaaagcctgaggaaaaat
gtcaaacaattgcgtgacacaatccaggcaatgatgcgtgagaacgagacgctgcctgac
atggagaagctggagcagcaggagttcaacctggatgtagatgagcaaaagagactgcaa
gccgagggggagcaggaggtcaccagggtccgaaatgagattgagttggagaacctagcc
aagtgctacctgcgcgacgtccttaagagagaatgctgggattccatgaaggtcaaaggg
caagctatcaaggccttccacactgaacacgaggtgaagaactaccccatgaaggagcgg
acacagcaggagctggatgaacttcatagagtggagagtatgaggaagattgaacgggct
gacagtaatctccagcaggagattctagagaagaagaccaagaccacgacggaagaagag
gaggaggaggaaggccgtgagatggagagtgcttccctcacaggtagcctcagtgcccag
tatggaggctcaaacccctacctctacaatcagttcaacctgcacatcagagagcagaag
atcaaccagatcactttgctacaggatgtcatctacaaagtgaagacagcctttaacaca
gactttaagggggtgcacaagcagaaggagcaggagatcaaccgagtgaaagataagaat
cgtcgcatcatggagatcatgtcagagctggaccacaagatgaagctgtgggagcccagt
ctgtctgacaacgagcggccagagagggcactgtctgtggaggactctgagatacatttt
gaaaagtacctcaccccagagcagagaaaaagagaggaggagaagaagaaagaggaggaa
caaagacggcagacggccaagagtgacaatatcagagagcgagctctggatgaaatgatg
ggtggagtactcgagctaaaaaaagaggacatcttgagagtggaggtgcctcagcctgag
ttcattgtatccaaaccggacattcagtggacagaggaagagaaaaagatctataaagag
tatgagaagaaagccaaagaactgagcgaggaacaggagaagtacagaaagactctggaa
gctgaaatgaataaactacagacgtccatcatggactccacccaggggtttgatgaaacc
ttgaccaagctctttgagaggaaggtgaaatctgagatggttatataccaggaagagctg
aagattacaaatctagttcactccattctgatagaggaggaggttctcaatagagagcga
gaactcagtctcaaactagaaaaaaacagggtctataagaatgagattggagaagagctt
aagaagcacaaagaggatgtagaaatgttccgggagacctacgacaatgtcgtggccgac
gacaaacttctcgacaggggattcaggaaggagttctttgatgtcccaggccatcttgtt
gatcagctgtacaagctatacaagcgcagacccagggtccagaggatgaggacccaggca
gacaacagtaccagcccctttaaagagcggcccctaccgggcccagtggcagcagagggt
ctctgtcagatgatgaaggccatggaggagctggacgctccagagaacatacctgaaagc
ctagacgtgtctgtgtgggagaggttctgcctggcccgcagagccaaagttgagagtgag
cagcaggtgaaagttaaggctttgactctggctgaaatgcaagcctttctgcagaagagg
accgatgaggatgagagtgcaagactggaaatgaaaagtctcatggatgacatcaatggg
ctacgagaggagaagacgcgtttccgcctggacatcatggttcagatcctgatcaagcag
ggccaggtggaggtggagaacggagacttcattgcagactactctgactctctgctgctc
cataagagtgtggtggaggacctcaacgggaccatcagagctctgggagagcagaagata
gccagcatggtggagtgcaaggacttccgtaaaggtatcatccagcaggagtgggagcac
aagaggatgaggatgcagaaggaggacctgaacaacaaagccagggacatccagatgctg
cgcgtctctcaggagctgcaggagtatctcagtgagacggatcatgacaaccgcatatca
aagcaggtttcaactctggagaaaaccataacattacaggaaaagactcacctaaagaat
gtgctgacctgtaagaagttgatcaagcagctgaacagacaggcagcaatgaaggcatca
aagaattctgctctggatgagcagctgaccaacatgcaagtgactgtggctgagaggaga
cacatctgtgaagccatagccatggaggagaaccatgagagtgatgcagaggagaggtac
caggagatcatccagaggaagaagctggtggagctagccagggcccaggctgaggaggtg
gctaccctcagggcagaggtggaacgcatgaggatgaagtccttccccgctctcgctcag
ctaaaacataactga
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integrated database retrieval system
