Oncorhynchus keta (chum salmon): 118369729
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Entry
118369729 CDS
T09424
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118369729
Membrane trafficking [BR:
oke04131
]
Endocytosis
Others
Others
118369729
Endosome - Lysosome transport
118369729
Endosome - Golgi transport
118369729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
118369729
NCBI-ProteinID:
XP_035610269
LinkDB
All DBs
Position
36:17496119..17564231
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AA seq
1247 aa
AA seq
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MVVSGSVWCWALLTCILISFYNMLTAYAEISWPASSTTTNVWFNRMDKLPLELRANLKSA
WVEVPKYIDKESTFSRDFRMETIDGKAVVPKGEEKLPKDLDGVIGKVPPDAVSTVRDQKA
PNRSKNFTADSKKSDSSFEVKDGTFASSNRTRTKRSTSFGEYSDRSQIGGPGDAFSAEKL
VEPLQGVYSSRTEYRRTGEDARTSPRQSEPLLVTSTFPLSGDSAHNQAMGHWVGENSSVI
LTLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNKKVGSTLACLYVCPTNKRKIMMLSDPE
LEQSVLISSDEGASFEKYPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVS
ENVTPGRFFWAQTGLDREADVVHMETHIAKGRAQYVKCRAQRCTESNRQYLFPGYIDKNS
LVVQDNYVFVQVTKSGQASYFVSYMRESFKRIQLPKYCLPKDMHIISTNEKQVFSAVQEW
NQNDTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDLYKVEGINGIFLANKLVGHEVK
TFITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDTPVNPYLPGRIFSMDSAPGI
IVATGNIGTELSSANLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRH
VWVSLDEGKKWDRHSFSLAPLFLDGVLMQPENHIITFTGHLSRVSEWQLIKIDYKAIFSR
RCMDGDYQTWHLHNKGEPCVMGEKQTFMKRRPGNRCMLAQDYSRVISSEPCICRTYDFEC
DYGYERQADGKCTPAFWFNPSTVTRSCSTSHNYLNSTGYRKVLSNNCKEGGKDVYSPRKQ
HCSPRPPRGLRLTTSQGELTATVGSNVTFLVYLDDGNSLWTYIQLDFGDGITFMYNLSRR
GDGIKHSYREDGIFRVTAHAENSQGYDISSLFLHITSPVERVYLSAPIVAIRKKEANLTA
VVWPVHHRTLTFFWWFENSSEPLITLDGSISYTFWKEGMNRIMVQVSSGCNILQDTKVII
VKDFFKSLLLSFSPALDEHNPDIPEWREDVGRVVRTAVSQVSGFPEERLLVSLFPGVPTT
AELFILPETQLPEHGKQNKEDLVSISNLVINALNHGLVQFELKADTQIIVYITQLTLAPL
VYSNPIHSSSVMLMLLSVVFVGLAAFFIFKLKRKIPWIHVQAEENQEKEPEMIGTVGQNN
TMSKMKLSEFPTEKELMEKELKTRSRGEYGRNGERVITREFPTCTNV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtctcggggtcagtttggtgttgggctcttttgacttgcattttaatctctttt
tacaatatgttgacggcatacgctgaaataagttggccagcgagttccacgacgacgaac
gtttggtttaaccgtatggataaattgcctctggagctgcgcgcaaacctaaaatccgca
tgggtcgaagtcccaaagtatatcgacaaggaatccacattttccagagattttagaatg
gaaacaattgatggaaaagccgtagttccaaaaggtgaggagaaattgccaaaggacttg
gacggagttattgggaaagtgccaccagacgctgtatctactgtcagagatcaaaaggcg
ccaaaccgttccaagaattttactgctgacagcaaaaagtctgacagttcctttgaagtt
aaagacggtacatttgcttcaagtaaccgtacgaggacaaagcgaagcacatcatttggc
gaatattcggacaggagtcaaattggaggtcctggtgacgcattttcagccgagaagctt
gtggagcctttacaaggcgtttacagttcgaggacagaataccgacgaactggggaggac
gcaagaactagcccgaggcaaagtgagccgcttctggttacctccactttccctctgtcc
ggagactctgcgcacaaccaggcaatggggcactgggttggagaaaacagcagcgtgatc
ctgaccttgacgaagcagtatgactttaacttgggtgctttcactgagagttctctgtgg
agatcagtggactatgggagcacttacataaaactgaataaaaaggttgggtcaaccttg
gcctgcctatacgtctgcccaaccaacaagagaaagataatgatgcttagcgaccctgag
ctggagcaaagtgtactcatcagctcagatgaaggtgccagcttcgagaagtatcccatt
aacttctacatggacggtctgctgtttcatccaactcaggaaaactggctactggctagc
agtcctgacaacaaggtttacagcacaatggattttggaagaaaatggcagttggttagt
gagaatgtaactcctggccggttcttctgggcacaaactgggctagacagagaggcagat
gtggtccacatggagacccacatcgccaaaggacgtgctcagtatgttaagtgcagagct
caacgatgcacagaatcaaacagacaatacctgttcccgggatacatagacaaaaattct
ctggttgttcaggacaactatgtgtttgttcaggttaccaagtcagggcaggcgagttac
tttgtgtcctatatgagggaatcatttaagcgaattcagctacccaaatactgtcttcct
aaggacatgcacatcatcagtacaaatgagaagcaggtgttttctgctgtacaggagtgg
aaccagaatgacacctacagcctgtatatctcagactctccaggggtctacttcactctg
tctctagagaacctccggaccagaagagagccaggcggaaatgtactggtcgacctgtat
aaggtggaaggaataaatggcatatttctagccaacaaattggtgggccatgaagtgaag
acattcatcacctataacaagggtcagacctgggcccttctgcaagcccccaacactgat
gtggctggaaacagtctgcactgcatcctgccattttgttctctgcatctgcacctggat
acgccagtgaacccttacctgcctggacgcatctttagcatggactcagcacctgggatc
attgtagctacaggcaacattggtacagagctgtcctccgctaaccttggaatgtttata
acatctgatgctggaaatagctggagacagatttttgaagaagaactcggtgtttggttt
cttgacaatggaggtgctttagttgcagtttctttagttgcaacagtacccatccggcac
gtatgggtaagtctggacgagggtaagaaatgggatcgccacagtttctctctggctcct
ttgtttctggatggagttctcatgcagccagagaatcacatcatcactttcactggacac
ttaagccgtgtttcagaatggcagctgataaagattgactacaaagccatctttagcagg
agatgcatggatggagattatcagacttggcacctacataacaagggagagccatgtgtg
atgggagagaagcagacctttatgaaacggaggccgggtaaccgctgtatgctggcccag
gactactcccgagtcatatcctcagaaccatgcatctgcaggacatatgattttgaatgt
gattatgggtatgaacgtcaagccgatggaaagtgtacccctgctttttggttcaaccca
agcactgtgacaagaagctgtagcactagccataactacctcaacagcacagggtacaga
aaggttttgtccaataattgcaaagagggagggaaggatgtgtactcccccaggaaacag
cattgttcccccaggcctcccagaggcctcagactgactaccagccagggagagctcacc
gccaccgtgggcagtaatgtcaccttcctggtgtatctggacgatggaaactcgttgtgg
acttatatccagctagactttggggacggcatcactttcatgtacaacctgagccggaga
ggtgatggaatcaaacacagctatagagaagatgggatcttcagagtgacagcacatgca
gagaacagccagggttatgacattagctccctgttcctacacatcaccagcccagtggag
cgtgtgtatctctcagctcctattgttgccatccggaagaaagaagctaacctaacggct
gtggtctggcctgtccaccacagaacactcaccttcttctggtggtttgaaaacagctcc
gagcccttaataaccttggatggaagcatctcgtacacgttttggaaggagggcatgaac
aggatcatggtccaagtgtcttctgggtgcaacatactgcaggataccaaggtcatcatt
gtcaaagatttcttcaaatccctgctgttatcgttctctccggctttggacgagcacaac
cctgacatcccagagtggagagaggacgtgggccgcgtggtgaggacagctgtatcacag
gtttctggatttccagaggaacggctgttggtatcgttgtttccaggtgttccaacaaca
gcagaactatttatcctgcctgagacacagttgcctgaacatgggaagcagaacaaagag
gacttagtgagtatatcaaaccttgttataaatgccctgaaccacggattggtccagttt
gagttgaaagctgacactcaaataattgtttacatcacacagctaactttggcacctctg
gtttactccaaccctattcacagtagctcagtcatgctgatgttgctgtctgtggtgttt
gttggtttagctgcgtttttcatcttcaagttgaaaaggaaaatcccttggatccatgtc
caggctgaggagaaccaggaaaaggagccggagatgattggcacggtcgggcagaacaat
accatgtccaagatgaagctcagtgagttccccacagagaaggaactcatggagaaagaa
ctgaagaccaggagcagaggagaatatggaagaaatggggagagagtgatcacaagagaa
tttcctacctgtactaatgtctaa
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