Oncorhynchus keta (chum salmon): 118369730
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Entry
118369730 CDS
T09424
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118369730
Membrane trafficking [BR:
oke04131
]
Protein recycling
Others
Others
118369730
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
118369730
NCBI-ProteinID:
XP_035610271
LinkDB
All DBs
Position
36:complement(17564258..17609856)
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AA seq
1271 aa
AA seq
DB search
METTVGCCPHWLIAMWMCLFTLTSTVDMTKTNIRCIPSSQLSVIKPAVRELSKVGFDPFG
KGPEDEAVGFAEKSPGCQDFKSSCKKANVEEYLARVSGDGEARSSVPESEQPFVNKSYSR
GLEERRLVDSSEVLYQHKSGSGITSKLTDRPMPPPATLNKVTVNNTRHNTFNSFGRENRL
KRHELSKKKAGASLRNLRRRRKRSFQTAESKTSWSGFGWNGEDASTPGQHELKLSSSTFA
LTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGTRYEKLDEKVGP
KTILSYLYVSPNNKRKIMLLTDPEVESSLLISFDEGASYQRYHLAFDILSLLFHPEQEDW
ILAYSHDQKLYVSVEFGRRWQLVHDSVVPNRFYWSKLGLDKEPGMIHLETSVSDRRSQYI
TCKLQNCTEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYKRNAFFPMKLPK
YTFPKDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEAHGLFFTLALENVVSSGGPEGNVM
IDLYEVAGIKGVFLSNKVVENEVKTFITYNKGRDWRLLHAPTTDLSGTRLYCVQPYCSLH
LNLHVSDNPYTSGNIVSKESAPGIIVASGTIGPELTANNVSIFITSDAGNTWREVFEEEY
SILFLNQGGALVAIRHTPLPIRHIWLSFDEGRHWNKFSFTSSPLYVDGVLGEPGEDTLIM
TIFGHFSHRSEWQLVKIDFRPIFNRRCTTDDYQTWQLHNDGKVCIMGVKRIFQNLKPDAR
CVKTKDQYISQMSDSCPCTEADFECDFGFERQSDGGCTAAFWFVPSSVSRDCTTGDSFLN
TTGYRKAQSNNCTAGTLGKYRLRRQRCPHQAPRGLQLVTSEGTLTATLGDNVTLLVFLEE
GDGSTTSITVDFGDGTAISYTNISSIEDGVKHTYSKVGIYQVAATALNSLGSERVLLYLH
VTCTLEQVQLSAPSVVVRNKAVDLSTVLKPRYVGTVTYYWWFNNHTEPVVTLVGGMSFTF
YKEGTHTVTVQVSAGNTVLQDKITVAVYEYFRSHVLAFSSNLDAFNPAVAEWRQDISRVV
KDSMVQVTGINGEQLLVSVLPGLPTAAELFIIPEKRPTEGTMNRKGTHLEQLSQVLLSAL
NQDLIQFTLRPGVQVNVYPTRLSPAPLVDTSESGHNGAAVIMLVSVVFVGLAVFVIFKFK
RKIPGINIYTEERSEKQQEVIPTVASIAVPNPEGDMVTSLEHLDTGPDARGIGYLPSLTD
IKLSDETPPVF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccgtcggttgctgccctcattggctcattgctatgtggatgtgtcttttt
accttaacttccaccgtggacatgacaaaaacaaatataaggtgcattccatcaagccaa
ctctctgttatcaagccggctgtccgggaactctcgaaagtgggatttgatccatttgga
aagggaccagaggatgaagctgtggggtttgcagagaagtcaccaggttgtcaagacttt
aaaagcagctgtaaaaaagccaatgttgaggaatatttagcgcgcgtctccggtgatggc
gaggcaagaagttcagtccctgaatccgagcaaccgtttgtaaataaatcatacagccgt
ggattagaagaacgtcggctcgtggacagttctgaagtgctctatcaacataaaagtggc
tcgggcatcacctccaaactcacagataggcctatgccgccacctgccaccctcaataaa
gtaaccgtcaataacactagacataatacatttaatagttttggaagagaaaatagactt
aaacgacatgagttatcaaaaaagaaggctggggcaagtttgaggaaccttcgccgtcga
cgaaagcgcagcttccaaacggcggagagcaaaacatcttggtccggattcggatggaac
ggtgaagatgcgtcaacccccgggcaacatgagttgaaacttagtagttctacattcgca
ctcacgggggattcagctcataaccaagccatggtgcattggtccggccaaaatagcagc
gtgattctaatgctgactaagtactttgacttcagccttggcagtgtcacagagagctct
ctatggaggtcaacagactatggaaccaggtatgagaaacttgatgaaaaggttgggcca
aaaaccatactaagctacttgtacgtgagtccgaataacaaacgaaagatcatgttactg
accgacccggaggtggagagcagcctgctcattagctttgacgagggcgcatcctatcag
aggtaccacttagccttcgacatcctcagcctcctcttccaccccgagcaggaggactgg
atcctggcttacagccacgaccagaagctctacgtctctgttgaatttggaagacgatgg
cagctcgtacatgacagtgtggtccccaacagattttactggtcaaaactgggtttggac
aaagaaccaggaatgattcacttggagacaagtgtttctgacagacgatcccagtatata
acatgtaagctgcagaactgcacagaggccaacaaaggcaggcctttccctgggtttatc
agcccagattccctggtggttcaggaccagtatgtattcattcaggtaccaatgggtggt
cggcctgtccattatgtgtcatacaaaagaaatgctttcttccccatgaagctgcctaag
tacacatttccaaaggacttgcagataatcagcaccgatgataaccaggtggtggcagca
gtgcaggattggcaccagaatgactcctacaacttgtacatgtcagaggcccacggtctc
ttcttcactctggccctggagaacgtagtgagcagtgggggaccagagggcaacgttatg
atagacctctatgaggtcgcagggataaaaggggtgttcttgtcaaataaagttgtcgag
aacgaagtgaaaacatttatcacttacaataaggggcgagactggcgtcttctacatgcc
cctaccactgatctgagcggtaccagactctactgtgtacagccctattgttcattgcac
ctgaatctccatgtgtctgacaacccgtacacgtctggaaacatagtcagtaaagaatca
gctccaggaattatagtagcatcaggtaccattgggcctgagctgaccgccaataatgtc
agcattttcatcacctcagatgctggcaacacttggagagaggtatttgaggaggagtat
agcatcctctttcttaaccagggcggtgccctagtggccattcgacacacacctctcccc
atcagacacatttggttgagttttgatgagggaagacactggaacaaattcagctttacc
tcctctcctctctatgtagacggagtcttaggagagccaggggaggacaccctcatcatg
acaatatttggccatttcagccatcgttctgaatggcagcttgtcaagattgacttcagg
cccatcttcaacagaaggtgcaccacagatgactatcagacctggcagttacacaatgat
ggtaaagtctgcatcatgggagtgaagagaatcttccagaatctgaagcccgacgccaga
tgtgtcaaaaccaaagatcagtacatctcccagatgtcagactcctgtccatgcactgag
gctgactttgagtgtgattttggctttgagaggcagagtgatggaggatgcactgctgcc
ttctggtttgttccatcctccgtgtccagagactgcaccaccggagacagcttcctaaac
actacaggataccgtaaggctcagtccaataactgcactgcgggaacccttgggaagtac
cgccttaggaggcagaggtgtccccaccaggcccccagaggtctgcagctggtcaccagt
gagggaacactcacagccaccctaggggacaacgtgaccctcctggtgtttctggaggag
ggtgacggctccacaaccagtataacagtggactttggagacgggacggccatatcctac
actaacatcagctccatagaggatggggtcaaacatacctacagtaaagtgggcatttac
caagtggctgccacggcactcaacagcctgggctctgagagagtcttactatacctgcat
gttacttgtacacttgagcaagtgcagctttcagctccctctgtggttgttaggaataaa
gcagtggatctatcaacagtcctgaagccacgttatgttggaacagtcacctactactgg
tggttcaacaaccacactgagcctgtcgtgactttagtgggaggaatgtccttcaccttc
tacaaggagggaactcatactgtcaccgtgcaagtgtcagcaggcaacactgtccttcaa
gacaaaataactgttgcagtctatgaatatttccggtcacacgttttagcattctcctct
aatctggacgccttcaatcctgctgtggctgaatggagacaggacatcagtagagtggtc
aaggactccatggtccaagtcacagggatcaatggagagcagcttctggtgtcagtgctc
ccagggttgccaacggcagcagagttgtttatcatcccagagaaaaggccaacagagggg
acgatgaatagaaaagggacacatttagagcagctttctcaggtcctgctaagtgccctg
aaccaagacctcatccagtttactctgcggcccggggttcaggttaacgtttaccccaca
cgactgtctccagctcctctcgtggacaccagtgagagtgggcacaatggtgctgcagtc
attatgctcgtgtctgtagtatttgtgggtttggcagttttcgttatcttcaagttcaaa
aggaagatccctggcatcaacatatacacagaggagaggtcagagaaacaacaggaagtg
atccctacggtggcgtccatagctgtcccaaatcctgagggagacatggtgacctctttg
gaacacttggacacagggccagatgcacgtggcataggatacctgccatctctcacagac
atcaaactctccgatgaaactccccctgtgttttaa
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integrated database retrieval system
