KEGG   Oncorhynchus keta (chum salmon): 118369818
Entry
118369818         CDS       T09424                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03010  Ribosome
oke04120  Ubiquitin mediated proteolysis
oke04137  Mitophagy - animal
oke04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    118369818
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118369818
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118369818
   04137 Mitophagy - animal
    118369818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:oke03011]
    118369818
   04121 Ubiquitin system [BR:oke04121]
    118369818
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118369818
Ribosome [BR:oke03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    118369818
  Archaea
    118369818
Ubiquitin system [BR:oke04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   118369818
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118369818
  Exosomal proteins of colorectal cancer cells
   118369818
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 118369818
NCBI-ProteinID: XP_035610427
LinkDB
Position
36:complement(23033734..23036682)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatttttgtcaaaacactcacggggaagactataaccctcgaggttgagccttca
gataccattgaaaatgtcaaagctaagattcaagacaaagaaggtatccctcctgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtctgactacaac
attcagaaggagtccactctgcacttggtgctgagactgcgtgggggtgccaagaagagg
aagaagaagtcctacaccactcccaagaagaacaagcacaagaggaagaaggtcaaactc
gcagttctcaagtactacaaggttgacgaaaacggcaagatccaccgtctgcgtcgtgag
tgcccagctgatgagtgtggcgctggcgtgttcatggccagccactttgataggcactac
tgtggaaagtgctgcctcacctactgcttcaacaagcctgaggacaagtaa

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