Oncorhynchus keta (chum salmon): 118369821
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Entry
118369821 CDS
T09424
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118369821
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118369821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118369821
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118369821
Intermediate filaments
Intermediate filament-binding proteins
118369821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
Motif
Other DBs
NCBI-GeneID:
118369821
NCBI-ProteinID:
XP_052354641
LinkDB
All DBs
Position
36:complement(23215933..23338518)
Genome browser
AA seq
2354 aa
AA seq
DB search
MELQRATSMPGPLSPGHLSPGALSPSGPGPSLATSPGPDLSYSAKQAAFNYNQLEGRFKQ
LQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGR
MRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIRVETE
DNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLIDFDKLKK
SNAHHNLQNAFNLAEQHLGIHKLLDVEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEG
KRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTY
RTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPRDGKLISDINKAWERLEKSEHERE
LALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAI
ETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARRIRLEMN
LGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQANRVKAV
NNNAQKFAIDAEGYKPCDPQVIRDRMAHMEFCYAELSQLAADRCARLEESRRLWKFFWEM
AEEEAWIREKEQILSSEDCGKDLTGAVRLLSQHRAFEDEMSGRAGHLQQTIKQGEELVAA
DHFGADKIRKRIQDIQAQWAALEGLSAVRKARLEEACNLHQFQADADDIDAWMLDVLRIV
SSADVGHDEFSTQALVKKHKDVAEEITSYRPVIDALHEQSKTLPKEQTGSEEVQGRLAGI
EERYKEVAELTRLRKQALQDALALYKMFNEAAACEVWIDEKEQWLNSMEIPEKLEDLEVV
QHRFESLEPEMNNQASRVAVVNQIARQLIHNGHPSEKEIKAQQDKLNTRWSQFRDLVDLK
KDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAA
IEDKLGELGKEGECLATEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEASKLQQF
FRELDDFQSWLSKTQTAIASDDMPNTLTEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEM
VTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQAEAFLNN
QEYVLAHTEMPRTLEGAEGAIKKQEDFMTTMDANEEKIKAVVDTGRRLVSDGNVNADRIQ
EKVDSIDERHKKNRMMASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEAR
NLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETESMVKEKLAALHKMWDDLES
TTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKKQQMLES
QVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLRKRKGNLMASREI
HQFNRDMEDEILWVEERMPLAISTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFER
SLQVLKDDDDSLSGEEIHQRLADLRRLWAQILEETGKRHGRLEEAHMAQQYYFDAAEAEA
WMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRGLTAAGHPES
ERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHEL
GQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHTDAATIAEWKDGLNEA
WADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQRMH
TTFEHDIQALGTQVKTLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEACDGRRVR
LLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDTRNNS
FTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVHQFGRDA
GVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLE
VRRQQEEEERKRNPPPAETQTDDASPQQREGEQVSQNGLPSDQDSLRDNVEESDIVNGVE
EPSPGASPGEARKAKPSQAATLPPKSQDSDPANQMEGYLHRKHEWEGHNKKASSRSWHNV
YCVINNREMGFYKDHKSASQGIPYHNQIPISLKDAACEVALDYKKKKHVFKLKATDGNEY
LFQANEDEEMISWMQAISSAASSDKTEMTPSSHSTPTSSRAQTLPASVALATESSPGKRE
KDKEKRFSLFSKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagtatgcctggccccttgtccccagggcatctctctcca
ggggccctgtccccttctgggcctggcccctctctagccaccagccctggccctgatctg
agctactccgccaaacaggctgctttcaactacaaccagctggagggccgctttaagcag
ctgcaagatgagcgcgaggcggtgcagaagaagaccttcaccaagtgggtcaactcccac
ctagccagagtgtcctgcaggatcactgacctctatatggacctgagggatggacgtatg
ctcatcaaactactggaggtcctctctggggagagactgcccaagcccactaaggggcgc
atgcgtatccactgcctggagaatgtggacaaggccctgcagttcctcaaggagcagagg
gtccatctggagaatatgggatcacacgacattgtcgacggcaaccaccgcctcaccctc
ggcctaatctggaccatcatcctccgcttccagatccaggacatcagagtggagactgag
gacaacaaggagaagaagtctgctaaagatgccctgctgctgtggtgccagatgaagact
gcaggatatcccaacgtgaacattcacaacttcagcaccagctggagagatggcatggcc
ttcaacgccatcctccacaaacacagacctgacctgatagactttgacaagctgaagaag
tccaacgcccaccacaatctgcagaatgccttcaacctggcagagcaacacctgggcatc
cacaagctgctggatgtagaggatatcagcgtggaccacccggatgagaagtccgtcatc
acctatgttgtgacctactaccactacttctccaaaatgaaggctctgaaggtggaggga
aaacgtattgggaaggtgctggacaatgccattgagacagataacatgattcagaaatat
gagagtctggcctctgacctcctggaatggattgagcagaccatcatcatcctcaacaac
cgcaagtttgccaactccttagtgggtgtgcagcaacagcttcaggccttcaacacctac
cgtaccgtggaaaagcccccgaagttcacagagaagggcaacctggaggttctcctcttc
accattcaaagtaagatgagggccaacaatcagaaggtctacatgccacgggatggcaaa
ctcatctcagacatcaacaaggcctgggagaggctggagaagtctgagcatgagagggag
ctggcgctgaggactgagctgattcgtcaggagaaactggagcaactggcccgccgcttc
gaccgcaaggctgccatgagagagacctggctgagtgaaaaccaacgcctcgtctcgcag
gacaactttggcttcgacctgcaggcagtggaggctgccaccaaaaagcacgaggccatt
gagacggacatcggcgcctacgaggagcgtgtgcaggctgtgctctctgtggccaaggag
ctggaggcggagaactaccacgacatcaagcgtgtgactgcgaggaaggacaatgtgctg
cgtctgtgggagtacctgctggagctgctgaaggcccggcgcatccggctggagatgaac
ctgggcctgcagagggtctttcaagagatgctccacatcatggactggatggacgagatg
aagatgctgctgctgtcccaggactatgggaaacacctgctgggagtggaggacctgctg
cagaagcatgctctggtggaggctgatatcgccatccaagccaaccgcgtcaaagccgtc
aacaacaacgctcagaagtttgccatcgacgcagagggctacaagccctgtgacccccag
gtgatccgagaccgcatggcccacatggagttctgctacgcagagctgagccagctggcc
gccgatcgctgcgcccgcctggaggagtcccgccgcctctggaagttcttctgggagatg
gccgaggaggaggcctggatccgggagaaggaacagatcctgtcctcggaggactgtggc
aaggacctgacgggggccgtgcgcctgctgagccagcatcgcgccttcgaggacgagatg
agcggtcgcgctggccacttgcagcagaccatcaaacagggagaggagctggtggccgcc
gaccacttcggagccgacaagatccgcaaacgcatccaagacatccaggcgcagtgggcg
gccctggaggggctgtctgcagtcaggaaggcccggctggaggaggcctgcaacctgcac
cagttccaggctgacgccgatgacatcgacgcctggatgctggatgttctccgcatcgtg
tccagtgctgacgttggccatgacgagttctccacccaagccctggtcaagaagcacaag
gacgtggctgaggagatcaccagctaccgaccagtcatcgacgccctgcacgagcagtcc
aaaaccctacccaaggagcaaactggctcagaggaggtgcaggggcgcctggcaggcatt
gaagagcgctacaaggaggtggctgagctgacccggctgaggaaacaggccctgcaggat
gccctggccctctataagatgttcaacgaggcggccgcctgtgaggtgtggatcgacgag
aaggagcagtggctcaacagtatggagataccagagaaactggaagatctggaagtggtt
cagcacaggtttgagagtctggagccagagatgaacaaccaagcatcccgcgttgccgtg
gtgaaccagattgctaggcaactcatccacaacggtcacccgagtgagaaggagatcaaa
gcccaacaggacaaactcaacaccagatggagccagttccgtgacctagttgacctgaag
aaagactccctcaactcagctctgggcgtgcagaactaccacctggagtgcaatgaaacc
aagtcgtggatccgtgagaagaccaaggttatcgagtccacccaggagctgggcaacgat
cttgccggggtcatggccctacagcgcaaactcaccggcatggagcgtgacctggctgcc
atcgaggacaagctgggagaactggggaaggagggggagtgcctggcgactgagcaccct
gaccaggcccagggcatcatgggtcgtctgggggagatcacaggggtgtgggatgagatg
aagggcaccttgaagaatcgcgaggagtctcttggcgaggccagcaagctgcagcagttc
ttccgggagctggatgacttccaatcatggctgtccaagacccagacggccatcgcctca
gatgacatgcccaacacactgacggaggcagagaagcttctggcgcagcacgagggcatc
aagaacgagatccgcaactacgaggaggactaccagaagatgagggacatgggcgagatg
gtgacccagggccagacggacgcccagtacatgttcctgaggcagaggctgcaggccctc
gacacgggctggaacgagctgcacaagatgtgggagaaccgtcagaacctactgtcccag
tcccatgcccaccagctgttcctcagggacaccaagcaggctgaggccttcctcaacaac
caggagtatgtgctggcccatacagagatgcccaggactctggagggggcggagggagcc
attaagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcaaagct
gtggtggacaccggacgcaggctggtcagcgatggaaatgtcaacgctgaccgcatccag
gagaaagtggactctatcgatgagagacataagaagaaccgcatgatggccagtgagctt
ctctgtaagctgaaggataacagagacctgcagaagttcctccaggactgccaagagctc
tccctgtggatcaatgagaagatgctcacagctcaggacatgtcgtacgacgaagccaga
aacctccacagcaaatggctcaaacaccaggcgttcatggccgagctgcagtccaacaag
gagtggctggacaagatcgagaaggatggaatgcagctgatagctgagaagccggagaca
gagtccatggtgaaggaaaagctggcagcgctccataagatgtgggatgacctggagtcc
accacccagaccaaggccaagtgtctgtttgatgccaacaaggccgagctgttcacccag
agctgtgccgacctagacaagtggctggtaggagtggatggacagatccaatcagacgac
tacggcaaagatctgaccagtgtcaacatcctgctcaagaaacaacagatgctggagagc
caggtggaggtgcgtcagaaggaggtggaggagctgcagagccaggcccaggtcctcagc
caggaggggaaggatacggacgaggtggacggccagcgccgcattgtggagaagaagttc
cagcagctgctggaccctctacggaagaggaagggaaacctcatggcctcccgcgagatc
caccagttcaacagagacatggaggatgagatcctctgggttgaagagcgaatgccactt
gcaatatcaacagaccacggaaacaacctgcaaacagtccagttactcatcaagaaaaac
cagaccctgcagaaggagatccagggccaccagccccgttgtgatgacatctttgagcgg
agcttgcaggtcctcaaggatgatgacgacagcctcagcggcgaggagatccaccagcgg
ctggccgacctgcgacgcctgtgggcccagattctggaggagacgggcaaacgccatgga
cgcctggaggaggcccacatggcccaacagtactactttgatgctgctgaagccgaggcc
tggatgagcgagcaggagctctacatgatgtcagaggagaaagccaaggatgagcagagc
tctgtggccatgttgaagaagcaccagatactggagcaggctgtggaagactatgctgaa
actgtccaccagctgtctcagacaagtagaggcctgactgccgccggacaccctgaaagt
gagcggatcggcatgcgtcagtcccaggtggataagctgtacgcggggctcaaggacctg
tcggaggagaggagggggaagctggacgagaggttccgtctgttccagctcaacagggag
gtggatgacctggagcagtggatcgctgaaagggaagtagtggctgggtcacatgagctg
ggacaggactacgaacatgtcacgatgcttcaggagcgtttccgtgagtttgctcgcgac
acgggcaacatcggtcaggagcgtgtggacaccgtcaaccagttggcggatgagctcatc
aactcaggccacaccgacgcggcaacaatcgcggagtggaaggatgggctgaatgaagcg
tgggccgacctgctggagctaatcgacacacgcacacagatcctggcggcttcctttgag
ctgcataagttctaccatgatgccaaggagatcctcaaccgcatcctggacaaacacaag
aagctgcctgaggagctgggccgagaccagaacacagtggagaccctgcagaggatgcac
accacctttgaacacgacatccaggccctggggacacaggtgaagacgttgcaggaggat
gctgtgcgtctgcagtctgcctacgccggagacaaggcagatgacatccaaaagagagag
ggtgaggtgctggaggcctggaggaccctgctggaggcctgcgacggccgcagggtcaga
ctgctcgacaccggtgacaagttccgcttcttcagcatggtgcgagacctcatgctctgg
atggaggacgtcatccgcctcatcgaggctcaggagaagcccagggacgtgtcgtccgtg
gagctcctgatgaacaaccaccaaggcatcaaggctgagatcgacacccgcaacaacagc
ttcaccaactgcatcgagctgggcaagtccctgttggcaaggaaacactacgcattagag
gagatcaaagagaagttactacagttgacagacaaaaggaaagacatgattgacaagtgg
gaagacagatgggagtggctaagattggttctggaggtgcaccagtttggtagggatgcg
ggtgtggctgagtcatggctgctgggacaggagccatacctgtccagcagggagatgggg
cagaacgtggacgaggtggagaaactcatcaagagacacgaggcctttgagaagtccgct
gccacctgggaggagcgcttctcagcgctggaacggctgactacgatggaattactggaa
gtgagaagacagcaagaggaggaagagaggaagaggaatccgccacctgcagagacccag
acggacgatgcatcgccacagcagagggagggtgagcaggtgtctcagaacggactgcca
tcggaccaggactcccttcgggacaacgtagaggaaagtgacatcgttaatggggtggag
gagcccagcccaggcgcgtcgcccggtgaagcacgcaaggccaagcccagccaggctgcc
acactcccgcccaagtcccaggactcagacccagccaaccagatggaaggctacctgcac
cgcaaacacgagtgggagggtcacaacaagaaggcatccagcagatcctggcacaatgtg
tattgcgtgatcaacaaccgggagatgggcttctacaaagaccataagagtgccagccag
gggatcccttaccacaaccagatccccatcagcctgaaggatgctgcgtgtgaggtcgcc
ctcgactacaagaagaagaaacatgttttcaaactgaaagctacagatggcaatgagtat
ctcttccaagccaacgaggatgaggagatgatctcgtggatgcaagccatctccagcgct
gcgtcctctgataagaccgagatgacccccagcagccatagcacccccacctccagccga
gcccagaccctgcccgcctccgtcgccctggcaactgagtccagccctggcaagcgtgag
aaggacaaagaaaagcgcttcagccttttcagcaaaaagaaatag
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integrated database retrieval system
