Oncorhynchus keta (chum salmon): 118370024
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Entry
118370024 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor-like
KO
K23215
bcl-6 corepressor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118370024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118370024
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118370024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_5
Ank_3
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
118370024
NCBI-ProteinID:
XP_052355756
LinkDB
All DBs
Position
37:23945007..24093565
Genome browser
AA seq
2099 aa
AA seq
DB search
MVDASAACRMNPLAALGMDRSSLMRESLRVHGGMVYPGIRTLSASEKAREGVSSLPLGYD
LVYKPEGLTLDGRKPGNGLYKSSPPGLQRPGGGXEGLGMERRVGPGDKPSELGLNGSNGF
LRLPWAVNPYADPGLYPFLDSSKYAALNMYKASFLSQPSPYLPQHLAYQSLCGGAGGSAA
GTERLFYMPPYPPAPISSPLAPPMRIPMATVVPNTLSPMQGLGPRIHHEASPYGSQLHQQ
HQAHQQSQPHHQSHSDRQPQSQPHHQSHSDRQPQSQPHHQSHSDRQPQSQPHHQSHSDRQ
SQSQPHHQSHSDRQPPSQPHHQSHSDRQPQSQPQSHSDRQSQSQPHHQSHSRDRQPQSQP
QSHSDRQHNNNSSSSKLSRTSSSKSSGSSSIHNSSSITSSSAGTGISSSLPVDSTQALIM
QSPRTAPHPPQTLVPPPSPLIDNSTLDIQKSLFRSPPCSSTTTTSSSPSVSHPFYMSSMS
SEHRSPVRSGSNTHKAKEQGSSSEHRNVERNGERKRSQSPLKTLSSDRPAVLQAPAKDPA
DKPLDLSAKILELEGSPNIFPPKLEALAKLGYSPAARYSLPPSRELLKETLSPSGASSKT
PERPEIISTLRSSWVVPSSTPVHDSSSSDTNHNKDPSVIKHKNLENLSSQQQRSSSCPRI
GEVDGAVTPNHAPAVVAPSGSRPSSASASPKVNGDWPRSSPNYSETAPSSNRVGSHPSSG
KPLKPVKKPEAQEMPFKPQQPPHLDNSHPSDNSHPSSHPPSQLYLPQSDSYLPPSLAYAN
RYLPYSVQESMSLPHMPMPGKGSVYPHPVLLGSSSLYPPRLPPKHGLPYGIPPSHGDYLT
FHDSQEMVHPLMSSPHTGLDLKTSERLQEPRSRPKEKIWQHHEDSAPAYKTQAPDTKHTR
RGDRETDRSTGLGSKSLNRKPLAGAREEIVCIDLIQDDGDSDSPLTKAVSPCAKRGDPSK
PVGSGSIGRNEGREAELQHMLRTGQAVELRPGQAHRQSEQQQRSQLWLGFHPSSLRPEPP
SLSPCPFPRHEEDSPSPAESSPISDLPEEQTLRCARTSGDRTSWNRRDQSLEGLKSRDCT
FEDPTSVDRSSGDRSFWDHTHEDCTFKDRSSWDRTRVDLTCRVRSCEDRTSADHSPRERT
LNESGFRNERTMDHYSDLDKDMHTDTESHEGESDDQGCPRARRSSLAKRIANSSGYVGDR
IKCVTTELYADSSKLSREQRALQMEGLTQEDSKLSQPAAYCERAMLRFSELELKEKEGGG
AAVDLADSQRERREGDGDGGEDRARCQGPARTGPGASALTEEVEKDCVQLTCPNNRVPVL
QRCPHTEGLPPREREQAGPDLEERRMMLEKEERVCVLPRERSASLPTAPVERQAQKDANP
GIMPTMPASMPTTVPGRKHAYALEPCQPLQAVSQGKEREENEREEEKEETMDVPSKRARL
TNGPTEPVPEELKNLKVCIELTGLRLSKPRLAQELSQWQAATQRSTEVNGSMAMTTILPN
GCPEVGVRDRKVASQEDRSLKRRSEVNGHAWCHETFGHGDIERVMLPSVPLTPAHRDRLY
RTPSTTPVRKPPLQTTTPALTPFHSLAPAHPHITLTPSPPRLSDKRQRLKEHRRTSALGL
GPPGPHPDHDPNPTGNLVDPRLRWHGDQDKPKGKRQCKTKHTTQRERERLGNEELREERE
RERLGNEAPREEREREKLGNEAPREEREREKLGNEELREERENKQVKEKRCSEKRRRSSS
LSDYSPSSPAPSLTLPPQLSPLPSPTETQDRTPTPSNPPVHTSTPASRPMPPEARRLIVN
KNAGETLLQRASRLGYEDVVLYCLENGVCDVNHRDNAGYCALHEACARGWLAITQHLLEH
GADVNCSAQEGTRPLHDAVENDHLEVVRLLLSYGADPTLATYSGRSLLRMTHSHGMEGFL
SEYFSDLKGREDTDEGIYWEFYGSAVCESGEDPAAYDILANPPGPGEEEDTRQGFEFEFS
DRPLLPCYNIQLSLSQGPRNWLLLSDVLKRLRMSSRAFRAAFAHLEVATIAEAEFYKQAS
LSQLFSCPDELAAFLPDSKELLDLVETSSELAALLGSSLECLDSRWEPKGARVKAKAHS
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcgagtgctgcttgcagaatgaacccgctagctgccctgggcatggaccgt
agcagcctgatgagggagagcctccgcgtccacggagggatggtctacccgggcatccgc
accttgtccgcctccgaaaaagccagggagggggtctcctccttgcccctgggctacgac
ctagtctacaaacccgaaggcttgaccttggatggcaggaagcctggtaacggtctgtat
aagagctctccccctgggttgcagaggcctggtggaggannggagggcctgggaatggag
cggcgtgtggggcctggagataaaccctctgagctgggcctcaacggcagcaacggcttc
ctgcgacttccctgggcagtaaacccgtacgctgaccccggactgtaccccttcctggac
tcctccaaatacgcagccctcaacatgtacaaggcctcgttcctgtcccagccctcaccc
tacctgccccagcacctggcctatcagtccctgtgtggaggggcggggggtagcgctgct
gggacagagcgcctcttctacatgcccccgtaccccccggcccccatctcctcccccctg
gcccctcctatgaggatccccatggccacggtggtccccaacaccctctcaccgatgcag
ggcctggggccccggattcaccatgaggcctccccctatgggtcccagcttcaccagcag
caccaggcccaccagcagtcccaaccccatcaccagtcacacagtgacaggcagccccag
tcccaaccccatcaccagtcacatagtgacaggcagccccagtcccaaccccatcaccag
tcacatagtgacaggcagccccagtcccaaccccatcaccagtcacatagtgacaggcag
tcccagtcccaaccccatcaccagtcacatagtgacaggcagcccccgtcccaaccccat
caccagtcacatagtgacaggcagccccagtcccaaccccagtcccatagtgacaggcag
tcccagtcccaaccccatcaccaatcacacagtagagacaggcagccccagtcccaaccc
cagtcccatagtgacaggcagcacaacaacaacagcagcagtagtaagctcagccggact
tcctctagtaagagctctggcagcagcagcattcacaacagtagcagtattaccagtagt
agtgctgggactggcattagcagcagcctaccagtggactccacccaagcacttataatg
cagtccccccgcacagccccccaccctccccagaccttagtccctcccccctctcctctc
atagacaacagcactttggacatccagaagtcactgttcagaagccctccctgctcctcc
accaccaccacctcttcctccccgtcggtgtcccatcctttctacatgagcagcatgtcc
tctgagcaccgctccccggtgaggtccggcagcaacacccacaaagccaaagagcagggc
agcagctcagagcacaggaatgtggagaggaatggggaaaggaagcggagccagtcccct
ttaaagactttgtcctctgatagaccagcagtactacaggctcctgccaaagaccctgcg
gacaagcctctggatctgtcagccaaaattctggagttggaaggctccccaaacatattc
cccccaaaactagaggccttggctaagctgggctactcgcccgcggctcgatacagctta
ccccccagccgggagctcctgaaagagaccctctccccgtcaggggcttcctccaaaacc
cctgagaggcctgagatcattagcactttacgctcctcctgggtggtgcccagctcgacc
ccggtccacgacagctccagctcagacaccaaccacaacaaagacccctccgtcatcaaa
cataaaaacctggagaacttgtcttcacagcagcagcgaagctcttcctgtcccaggata
ggtgaggtcgatggggctgtcaccccaaaccatgccccagctgtggtagccccttctggg
agccgaccgtcctctgcctccgcctctcccaaggtcaacggtgattggccaagatcctcc
cccaactactctgagacagctccttcttccaacagagtgggcagccatccctcttctggg
aagccattgaaacccgtcaagaaaccagaggctcaggagatgcccttcaaaccccagcag
ccgccccacttagacaacagccatccgtccgacaacagccatccgtccagccacccccct
agccaactctacctcccccagagtgacagctatctgccccctagcctagcctacgctaac
agatacctgccctactcagtccaggagagcatgtccctgccccacatgcccatgccaggc
aaaggctcagtgtacccccaccctgttctgctgggcagcagcagcctgtacccaccccgc
ctgccccccaagcacggcctcccgtacggcatcccccccagccacggagactacctgacc
ttccatgactcccaggagatggtccatcccctcatgtcctcgccccacacaggcctggac
ctcaagaccagcgagcgcctgcaggagccccggtccaggcccaaggagaagatttggcag
caccacgaggactctgccccggcctacaagacccaggccccagacactaaacacacccgc
aggggggacagagagaccgacaggtccacaggcctgggctcaaagagcctcaaccgcaag
cccctggcgggagctagagaggagatagtctgtatcgacttaatccaagacgatggggac
agcgactctcccctgaccaaagctgtctctccatgtgctaagagaggagacccttccaaa
cctgtgggtagtgggagtatcgggagaaacgaggggagagaggcagagctccagcacatg
ctccgtaccggccaggctgttgaactcaggccaggccaggcccacaggcagtcagagcag
cagcaacgcagccagctgtggctgggcttccacccttcctccctccgtcctgagcccccc
tccctctccccctgccctttccccagacatgaggaggacagccccagccctgcagaaagc
agccccatctctgacctgccagaggagcagacccttcgctgtgcaagaacttctggagac
cgcacctcttggaaccgtagagaccaatctttagagggccttaagagcagggactgtact
tttgaggaccccacctctgtggaccgtagttctggggaccgcagtttctgggaccatacg
catgaggactgtacttttaaggaccgcagctcttgggaccgtacacgtgtggatcttaca
tgtagggtccgctcttgcgaggaccgcacctctgcagaccactctcctagggaacgcacc
ttgaacgaatctgggtttaggaatgaaaggaccatggaccactactcggacctggacaag
gacatgcacacggacacagagtcccacgagggtgagagtgacgaccaaggctgccccagg
gccaggaggtccagcctggccaagcgcatcgctaactcctctggctacgttggtgaccgc
atcaagtgtgtcaccaccgagctgtacgccgactccagcaagctgagcagagagcagcgg
gcactgcagatggaaggcttaacacaagaggacagtaaattaagtcaacctgctgcttac
tgtgagcgtgctatgctgcgcttctctgagttggaactgaaggagaaggagggaggaggg
gcagcggtggacttggcagacagccagcgtgagcggagagagggggatggagatggagga
gaggacagggcgcgctgccaaggcccagccagaacggggccaggggcctcagccctcaca
gaggaggttgagaaggactgtgtgcagctgacgtgccccaacaacagagtgcctgttctc
cagcgatgcccacacactgagggcctcccacccagagagagggagcaggctggccccgac
ctggaggagaggaggatgatgctggagaaagaggagagggtgtgtgtgctcccacgggag
cggtctgccagcctgcccacggccccagtggaaaggcaggcccagaaggatgccaaccct
ggcatcatgcccaccatgccagcctccatgcccacaacggtgcctggcaggaaacacgca
tatgccctggaaccgtgccagccactccaggccgtcagccaggggaaagagcgggaggaa
aatgagagagaagaggagaaggaggagacgatggacgttccatccaaaagagccaggcta
accaacggccccactgagcccgtcccagaggaactaaagaacctcaaggtgtgtatcgag
ctgaccggcctccgactcagcaagccccgcctcgcccaggagctcagccaatggcaggcc
gccacccagaggtcgacagaggtcaacggaagcatggccatgacgacaatcctgcccaac
gggtgccccgaggttggcgtcagagacaggaaggttgcctcacaagaagaccggagcctg
aaacgcaggtcagaggtcaacggccacgcctggtgtcatgaaacgtttggtcacggcgac
atcgagcgagtgatgctgccgtctgttcctctgaccccagcgcatcgggaccgcctctac
cggaccccgtccaccacccctgtcagaaaaccacccctgcagaccaccacccctgccctc
accccctttcactccctggcccctgcacacccccacatcaccctcacccccagccctcca
cggctgtcagacaagagacagaggctaaaagaacaccgcaggaccagcgctttgggactg
ggaccccccggccctcaccccgaccacgaccccaatccaacggggaacctggtggacccc
agactccgttggcatggtgaccaggacaagcccaagggcaagcgtcagtgcaagactaaa
cacaccacccagagggagagagagagactggggaatgaagaactgagggaagagagggag
agagagaggctggggaatgaagcaccgagggaagagagggagagagagaagctggggaat
gaagcaccgagggaagagagggagagagagaagctggggaatgaagaactgagggaagag
agggagaataagcaggtcaaggaaaagcgatgcagcgagaagcggaggaggtcttcatcc
ctgtcggattactccccctcctcccccgccccctctctcaccctgcccccccagctcagc
cctctccccagccctacagagacccaggaccgcacgccaactccctccaaccccccggtg
cacacctctacccctgccagccgacccatgcctcctgaggcccgcaggctcatcgtcaac
aagaacgcaggagagaccctgctccagagggcttcccgcctaggatacgaggatgtagtg
ctgtactgcctggagaacggggtgtgtgacgtcaatcaccgtgacaatgcaggctactgt
gcgctgcacgaggcatgtgcacgtggctggcttgctatcactcagcacctgctggagcac
ggtgccgacgtcaactgtagcgcccaggaaggcaccaggcccctccatgacgcggtggag
aatgaccatctggaagtggtccgtctgctgctgtcctacggagctgacccaaccctggct
acgtactctggccgcagcctcctccgcatgacccactcccacggcatggagggattcctc
tctgagtatttttccgacctgaaggggcgtgaagacactgacgaaggcatctactgggag
ttttacggcagcgccgtgtgtgagtcaggtgaggacccagcagcctatgacatcctggct
aaccccccaggcccaggagaggaggaggacacaaggcagggctttgagtttgagttctct
gaccgacccctcctgccctgctacaacattcagctctccctctcacagggtcccagaaac
tggctgctcctatcagacgtcctgaagagacttagaatgtcctccagggcgttcagggca
gccttcgcccatctggaggtagcaaccatcgccgaggcagagttctacaagcaggcgtca
ctgtcgcagctcttctcgtgccccgacgagctcgccgccttcctccccgacagcaaggag
ctgctggacctggttgagaccagctcagagctagctgcgctgctgggctcctcgctagag
tgtttggacagccgatgggagcccaaaggggcccgggtcaaagctaaagcccactcgtga
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integrated database retrieval system
