Oncorhynchus keta (chum salmon): 118370117
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Entry
118370117 CDS
T09424
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3 isoform X3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00230
Purine metabolism
oke00670
One carbon pool by folate
oke01100
Metabolic pathways
Module
oke_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
118370117 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118370117 (gart)
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
118370117 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
118370117 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
118370117 (gart)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
Dala_Dala_lig_C
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
118370117
NCBI-ProteinID:
XP_035610816
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All DBs
Position
37:6928397..6957557
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AA seq
1021 aa
AA seq
DB search
MAVRLLVIGSGGREHTLAWKLAQSPHIQQVLVAPGNAGTANCGKISNSEVSVSNHSILAQ
FCKEHSVGLVVVGPEVPLAAGMVDDLQAAGVPCFGPSAKAAQLEASKSFSKAFMDRHGIP
TANWCSFTDPQEACSYIRTASFPALVVKASGLAAGKGVIVAKDQEEACQAVLDIMKDKTF
GSAGETVVVEELLEGEEVSCLCFSDGCSVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVTQELLQQIRETVLQKTVDGMKEEGTPYVGVLYAGLMLTKQGLKVLEFNCRFGDPECQV
LMPLLKSDLYEVLQSTLEGKLASSPPEWHQDMSAVTVVMASPGYPGSYKKGVAITGLSQV
EETGVQVFHAGTSLKEGGVVSSGGRVLTVTAVRSSLEMALHAANRGVAAVGFPGAVYRRD
IGHRGIAHLTQHSRGLTYKDSGVDIAAGNRLVDMIKPFAKATSRSGCNAELGGFAGLFDL
KAAGFIDPILVSGTDGVGTKLTIAQACQQHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASAVIRGVAEACGLAGCALLGGETAEMPGVYGPGEYDLAGFCVGAVERGALL
PRLGDICEGDLLIGVASSGVHSNGFSLVRKVLERAGVTYSSPAPFGKPGQTVGEVLLTPT
KIYSRLLLPILRSGAIKAYAHITGGGLLENIPRVLPQELSVDLDASRWIIPPVFSWLQEE
GGLCEEEMGRTFNCGLGAVLVVAFPDAQSVLRKLQAHEDAWIVGSLAHKQPGAEPVVIRN
LKHSLRLGPSPCVVDLGPMQNGASQGDSSSTVPRKRTRVGVLISGTGTNLQALMEQTKRT
SSSAEIVVVISNQPGVLGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDHVLEEFDVEVVC
LAGFMRILTGSFVRKWNGKLLNIHPSLLPSFKGVNAQKQALQAGARVSGCTVHFVAEEVD
AGAIIAQEAVPVLMNDTEESLSDRIREAEHRAFPAALELVAGGGVRLGDDGRIIWNPNAQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcggttgctggtgattggcagtggtgggcgggaacacaccttggcatggaag
ctggcacagtcaccacacatccagcaggtcctggtggcaccagggaacgctggcaccgcc
aactgtggaaagatctccaactctgaggtgtctgtgagtaatcactccatcctggctcag
ttctgtaaggagcatagcgtggggctggtggtggtagggcccgaggtgcctctcgcagca
ggcatggtagatgacttgcaagcggcaggggtcccgtgtttcggcccctcggcgaaggct
gcccagctggaggccagtaagagtttctccaaggcctttatggaccgtcacggcatcccc
acagccaactggtgctccttcaccgacccccaggaggcctgcagctacatccgcacggcc
agttttcctgctctggtggtgaaggccagcggcctggctgcagggaagggtgtcattgtg
gccaaggatcaggaggaggcctgccaggctgtgctggacataatgaaggacaaaacattt
ggctctgccggggagactgtggtggtggaggaactactggagggagaagaagtgtcttgt
ctgtgtttcagtgatggctgcagtgtgtcccccatgcccccggcccaggaccacaaacgc
ctgcaggacggggacctgggccccaacacgggcggcatgggggcctactgccccaccccc
caggtgactcaggagcttttgcagcagatcagagagactgtcctccagaagactgtggat
ggcatgaaggaggagggaaccccctatgtgggtgtgctgtatgctgggctgatgttgaca
aagcaggggctgaaggtcctggagtttaactgtcgcttcggcgacccagagtgtcaggtg
ctgatgcccttgctgaagagtgacctgtatgaggttctccagagcaccctggaggggaag
ttggcatccagtccacctgagtggcaccaggacatgtctgcagttactgtggtcatggcc
agccctggctaccccggctcctataagaaaggtgtcgcaatcactggtctgtctcaggtg
gaggagacaggggtgcaggtgttccacgccggcacgtcgctgaaggaagggggtgttgtc
tccagcggggggcgtgtcctcactgtcactgctgttaggtcgtctctggagatggccctg
cacgcagccaatcggggtgtggctgccgtggggttcccgggagccgtgtaccgacgtgac
atcggtcaccgaggcatcgcccacctcacccagcacagcagaggcctaacttataaggac
agcggagtggacatcgccgcgggaaatcgactggtagacatgatcaagccatttgccaag
gccacttctcgctcagggtgtaacgctgagctggggggcttcgccgggctctttgatctc
aaagctgcaggcttcatcgaccccatcctggtgtctgggacagacggagtagggaccaag
ctcacgattgcccaggcatgccagcagcacagcaccctgggacaggacctggtggccatg
tgtgtcaacgatgtgctggcccagggggcggagcccctcttcttcctggactacttctcc
tgtggccgtctggatgtgggcgtggcctccgctgtgatcaggggcgtggccgaggcctgc
gggttggcgggctgcgctctgctgggcggggagactgcggagatgcctggcgtgtacggc
cccggcgagtacgacctggcagggttctgtgttggggcggtggagaggggcgccctgcta
cccaggctgggggacatctgcgagggggacctactcattggggtggcctcctcgggggtg
cacagcaatggattcagcctggttcggaaggtcctggagagggcaggagtcacctacagc
tcccctgcacctttcgggaaacctggacaaaccgtgggcgaggttctcctgacgcctact
aagatctacagccgcctgctcctgccaatcttgcgcagcggcgccatcaaggcctatgcc
cacatcactgggggcggcctattggagaacatcccccgagtgctgcctcaggaactgtcc
gttgacctggacgcctcccgttggatcatccctcctgtgttctcatggctccaggaggag
gggggcttgtgcgaggaggagatggggcgcaccttcaactgtggccttggggccgtgctg
gtggtggcctttccggatgcccagagtgttctgaggaagctccaagcccacgaggatgcg
tggatcgtgggctcgctggcccacaagcagcctggggccgagccggtggtgatcaggaac
ctgaagcacagcctgcgtttaggcccctctccctgtgtagtagacctggggcccatgcag
aacggagcatctcaaggggacagcagtagcaccgtcccccgcaagaggaccagggtgggc
gtcctcatctcaggcacaggcaccaacctgcaggcgctgatggagcagaccaagagaacg
tccagctcagcagagatcgtggtggtgatctccaaccagccgggggtcttgggcctcaaa
agggcctctctggctggcatacagacacgggtggttgaccataagctgtacggtagccgg
gcagagtttgacggcaccattgaccacgtgctggaggaatttgatgtggaggtggtgtgt
ctcgccggattcatgaggatcctcacggggtccttcgtcaggaagtggaacggaaaactg
ctgaacatccatccatccctgctgccctcattcaagggggtgaatgcccagaagcaggct
ctgcaggcgggggcacgggtctctggctgcactgtccactttgtggctgaagaggttgat
gccggggccatcattgctcaggaggcagtgccggtgttgatgaatgatactgaggagagt
ctatcagatcgcatccgggaggcagagcaccgggccttccctgccgccctggagctggtg
gccgggggcggcgtgaggctgggggatgacggacgcatcatctggaaccccaacgcacag
ggctaa
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