Oncorhynchus keta (chum salmon): 118370215
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Entry
118370215 CDS
T09424
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118370215
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118370215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
118370215
NCBI-ProteinID:
XP_035611011
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All DBs
Position
37:complement(12217191..12237852)
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AA seq
1722 aa
AA seq
DB search
MHQHCHGQISVMESQRKRYAAPSSGEDSSGERGSLHTWKGYSCSVTPERVLLSRPVLQAA
LGTRHGVLLVEGGQVYSFGEFRWKQSQVSEVGPLKPVLESALSGQCVVAVAAGSFHSGAV
TEDGGVHMWGENSFGQCGLSSLTVVPNPTPVAVLDPDTSPPHTIRVLELTCGEQHSLALS
AQHEVWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEAR
RPLPDKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLADGEARLEPGRSPPLRLQSSP
SEPLSSHTSASAPGLHPSITDHTDYERRRTVAQNGEILTTRDSDMRDAAGTDSDRTVGGA
GSQNSPYPDDQAVKEYLNKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSDLLPGVMPV
TTSSALNSLVSSCASAVAERVVSTCEALSLKKRINCHYPGVGGVAGAPGGVPGGFPGGPA
EERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPRVRVVPL
TPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSSKEVVLVAAGA
HHSLALTAQSQVFSWGSNSSGQLGHMACPTTIPRLAKLSEGIRVWDVGAGAQHTLLLADG
DCYQPILYYSGQQVREAAQDAPQDQTEGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCVAL
ADRNVTGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLGENYCSRYSSAGQRPWVRES
LGTALGPASTVLLQSLARCYSRLCHLTGQHSALLTANLRRRREVKSLVMLEHASIFLDTY
NEYCCSVGNFLVMGGFQALAKPSLDFFGKCPELLQRLAESSEENIPLSDLLVALFYLPMR
HLHEYGRLLLKLGTCFEVSSVDYQKLQDCCSKFEALALHLKRRRKEAEYTYHFWKSFPGK
MTVSGLDSLRKPPRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLFST
HHVFPLATLWVEPIPEENTDLYGLKVISPEETFTLLACSSMEKAKWLRSINQAVDQAMSG
AGQSGSGAGQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGMVKWLDGRIYTG
TFKNGLEDGFGDYVMPSKTLNLNDHYQGHWKEGKMHGIGTYKYATGELYEGSFQDNMRHG
HGMLRSGTLNSSSPSVFIGQWVHDKKTGYGVFDDITRGEKYMGMWQDDQRQGTGVIVTQF
GLYYEGAFNNNKMQGTGVLLSEDNTTYEGEFSEDWTLNGKGVLTMANGDYFEGTFTGEWG
SGLKVSGSFFKPNLYDSDGDKGRAVKLGRLAVRPEEKWRAVFEECWMRLGCEAPGQGENQ
RAWENIAVALTTSSRQHRDCPEMNLSQSHNRTLESLEFNPQQHVGPVTMEKYDRIRHYLI
KACDTPLHPLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFPDL
PEEGGVIPEPSSDPQDKKDSNCADTQLESPKPGRVVSSSSLLLPVLLPRLYPPLFTLYAL
EKEREDDVYWECVLRLNKQPDMALLAFLGVQHKFWPVSVPVLGERTEVVSSTKDACFASA
TETLQQISTTFTPSDKLQVIQLTFEEITKEVVSSLEDSFLWSMDDLFPVFLYVVLRARIR
NLGSEVSLIEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaaaggtatgca
gctccgagctctggtgaggacagttcaggggagcgaggttcgctccacacctggaagggc
tactcctgtagtgtcaccccagagagagtgctcctgtccaggcctgtgctgcaggctgcc
ctgggaacgcgccatggggttctattggtggagggtgggcaggtgtacagctttggtgag
ttccgatggaaacagagccaggtctcagaggtgggccccctgaagcccgtcctagagagc
gctctcagcggccagtgcgttgtcgccgtggcagcgggcagcttccacagcggggcagtt
accgaggacggcggggtccacatgtggggggagaactccttcggccagtgtggcctgtcc
agcctcactgtagtccccaaccctactccagtggctgtcctggaccccgacaccagcccc
cctcataccatccgggtcctggagctgacctgcggggagcagcactcccttgctctctct
gcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtcaccaccatc
ttccccgtatggaagccccagaaggtggagcacctggcgggcagacacgtccttcaggtg
gcctgtggggccttccacagccttgccttggtgcgttgcctaccacctcaggaggcccgg
cggcccctgccagacaagtgtggccagtgcaaccagctgctctacaccatgacggacaag
gaggaccacgtcattatctcagatagtcattactgccccctaggggtggagttgctggct
gacggagaggccaggctggagcctggaaggtcccctccgctcaggctccagagctcccct
tcagagcccctctcctctcatacctcggcctcagcgcctggtctccatccctccataaca
gaccatacagactatgagaggagaaggacagtggcacagaatggggaaatcttaaccact
agagactctgacatgagagatgctgctgggacagactcagatcgaactgtggggggtgca
ggttctcagaactccccctaccctgatgatcaggcagtgaaagaatatctcaataaactg
tctgacacctcattggctgaggagactgccaagatgaccatagcaggagcaagttttcag
cccccagcagatagccttgacctcctgacctctgacctcctccctggggtcatgccagtg
accaccagctctgccctcaacagcctggtctcatcctgtgcctccgccgtggccgagaga
gtggtctccacctgcgaggctctgtccctgaagaagaggattaactgccactaccctggg
gttgggggtgtagcaggagcacccggtggggtgccaggagggtttccagggggccccgcg
gaggagcgggtgcgtctggaggagtctatgcaggggaagaagagctgcagcacgggggat
atccgtgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactcctctct
caggtgtcccccaggttgctgcggagggccagccggcccagggtgcgagtggtgcccctc
acccctgtgggagggctcccagaggcgggggagctgctcccctccctgcagaccgaggtg
tggagctgggggcgtggtgaggagggccagctaggccacggggacaacctccccaggcta
cagccactgtgtatcaagtgcctgagcagtaaggaggtggtgcttgtggctgctggggca
catcactccctggccctgacggcacagtcccaggtcttctcctggggtagtaacagctct
ggccagctaggacacatggcgtgtcctactactatcccacgccttgccaagctgtctgag
gggatccgtgtatgggacgtgggtgcgggggcgcagcacaccctcctcctggccgatggg
gactgttaccagcccatcctttactatagcggacagcaggtcagagaggcggctcaggac
gcaccccaggaccagacagaggggtacagctacacacagcaaccagtgctgctccccttc
tgcatgaacttgggctacgtgagcggtgtgtttgcggggggccagagctgcgtggcgcta
gccgaccgcaacgtcacgggtttcatcgccagcctccacgagctggctgctgccgagagg
aagttctactgcaagctgagctctgtgaagaaccacatcctgcgccccctgttggacctg
ggtgagaactactgctcccgctacagctccgctggacagaggccatgggtcagagagtcg
ttgggtacagccctaggcccggcgtccacagtgctgctacagagcctggcgaggtgttat
agccgcctgtgccacctcactgggcagcactccgccttgctcaccgccaacctgcgccgc
cgtcgggaggtgaaaagcttggttatgctggagcacgccagcatcttcctggacacgtac
aatgagtactgctgctctgtgggtaacttcctggtgatggggggcttccaggctctggcc
aagccctcgctagatttctttgggaagtgtccagagctgttgcagcggctggcagagtcc
agcgaggagaacattcctctgagtgacctgttggtggcgctcttctacctgcccatgaga
caccttcacgagtatggcaggctgctgctcaaactgggaacctgcttcgaggtgagctca
gtggactaccagaagctgcaggactgctgctctaagtttgaggccctggctcttcatctg
aagaggaggaggaaggaggcagagtacacgtaccacttctggaagagctttcctggcaag
atgacggtcagtggcctggattccctgcgtaagcccccccggaggctgatctgtgagagc
agtaacaaggccctgacgctacagaactctggaaggttctctgtcaactggttcatcctc
ttcaatgatgcactcgtccacgctcagggtgtggttccctataaaagccttttctccacc
caccatgtcttcccattggccacactgtgggttgagcccatccctgaggagaacactgac
ctgtatggactgaaggtgatttcacctgaggagaccttcaccttgctggcctgttcttcc
atggagaaggccaagtggcttcgctccatcaaccaggcggtggaccaggccatgagtggg
gcggggcagtcaggctcaggggcagggcagagggcggagcctcccatctcccggactgcc
tcctacaccttctacaaggacagccgtctgaaggaggccacctacgagggccgctggctg
gccggcaagcccaatgggaggggaatggtgaagtggcttgatgggagaatttacacgggg
acgttcaagaacggactggaggatggttttggagattacgttatgcccagcaagacgttg
aacctgaacgaccactatcaaggccactggaaagaagggaagatgcacggcatcggaaca
tacaagtatgctacaggtgagttgtacgagggctcgttccaggacaacatgcgtcacggt
cacgggatgctgcgcagcggcacgctgaactcctcctctcccagcgtcttcatcggccaa
tgggtgcacgacaagaagacgggctacggcgtctttgatgacatcaccagaggagagaag
tacatgggcatgtggcaggatgaccagcggcagggcacgggcgtcatagtaacccagttt
ggcctgtactacgagggagccttcaacaacaacaagatgcagggcacaggggtcttgctg
tctgaggacaacaccacatatgaaggagagttctcggaggactggactctcaacgggaag
ggtgtgctgaccatggctaatggggactactttgagggcaccttcactggggagtggggc
tccggcctgaaggtctccggatccttcttcaaacccaacctctacgactcagacggggac
aagggccgcgctgttaagctggggcgcctggcggtgcgtccggaggagaagtggagggca
gtgtttgaggagtgttggatgaggctgggctgtgaggcccctggccagggagagaaccag
agagcctgggagaacattgctgttgccctgaccaccagcagtagacagcacagagactgc
ccggagatgaacctgagtcagagtcataacagaactctggagagtctggagttcaaccct
cagcagcatgttggccctgttaccatggagaagtatgaccgtatccgccattacctcatc
aaggcgtgtgacacgcccctgcaccccctgggcaggctgatggagaccctagtggctgtc
tacaggatgacctacgtgggggtgggggccaaccgtcgcctcctactgcaggctgtcaac
gagatcatgtcctacctggcacgcatcttccagctcgtcaggttcctgttcccagatctg
cctgaggagggtggagtgatccctgaaccatcctctgacccccaggacaagaaggattcc
aactgcgcagacacccagctagaatcccccaaacctgggcgtgtagtgagtagctcctct
ctgctcctgccggtgttactgcctcgtctctacccccctctcttcaccctgtacgccctg
gagaaggagagggaggacgacgtgtactgggagtgtgtcctccgcctcaacaaacagcca
gacatggccctgctcgccttcctcggagtgcaacataagttttggccggtttcggttcca
gtgctgggggagaggacagaggttgtgtccagcacaaaagacgcctgttttgcctcggca
acggagaccttacagcagatcagcacaacgttcacaccatccgacaagctgcaggtgatc
cagctgacattcgaggagatcacaaaggaagtggtgtcctcactggaggatagcttcctg
tggtccatggacgacctgtttcctgtgttcctctacgtggtgctgcgcgcccggatcagg
aatctggggtcagaggtgagtctgatagaggacttgatggacccctgtgtacagcatgga
gaacacggcatcatgttcaccactctcaaggcgtgttactatcagatccagcatgagaag
accacctga
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