Oncorhynchus keta (chum salmon): 118370300
Help
Entry
118370300 CDS
T09424
Name
(RefSeq) collagen alpha-1(VIII) chain-like isoform X1
KO
K23455
collagen type VIII alpha
Organism
oke
Oncorhynchus keta (chum salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
118370300
NCBI-ProteinID:
XP_052369910
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search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NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttacttctgttcagggtctgtatcacacttctgtaactccggtgatagttccc
ctcaacagacacacactgagcaaggacatggccaagccactcccctctactcatctattg
gtggtggcactccagctgtgtctagtactacgccaccatgcccgtggggcggcatattac
gggcacaagcagccgcagcacccacagcagcaccttccccagcagcaccagcccatgcaa
cagatacctcacatgcccctagggaacgggtatgggaacgggaacgggaatgggaacggg
aacgggtatgggaacggggatgggctgcccaagcaacagtacgggaaggaaatgccacaa
catatgccatacggcaaagagatgccatatgtgctgccacagtatgggcaagagcttcca
cagatgcttccacagatgcacgaacaaccccagatgccacccaataagggcaagggaaaa
ggtcagtcatatcccagtaatgggaaaggccttggaggcccaccacctgatgatagggga
ctacagggtcctggtcccgaggggccaccaggagcccaagggcctccaggaccacagggc
cctccagggatgctaggtcaagggatgcccggcccccatggaaaaccaggccctcctggt
ccccaagggtatcctgggatagggaaacccggaatgccgggaatgcccggtaaacctggt
ggaggcggccagccaggtccgaagggcgaccttggtcctggtggtgatgtaggaccaatg
gggatgcctggggggccaggtcttccagggccaccaggcctgccaggcatcgggaagcca
gggggtcagggactgcctgggcagcctgggcctcgaggggagcctggacacaagggcata
cctggactgcctggtcttcctgggcccaagggagacaaagggattggcttgccaggattg
ccaggtctgaaaggacctggtggaccacctgggcctcctggtcaagggggtttgccaggg
gttggaaaaccaggtctgaatggactaccaggattgcccgggggggcaggaaaaccaggc
cctcctggagaaggaggacttgctggtccaccaggtgaaggaggagaaccaggaccacct
gggctaccaggtattggcaagcccgggcaagatggtttgccaggacaaccagggttccca
ggtggtaaaggggaatcaggcccaccaggtttgccagggggcccaggcctacctggttac
ggaaagccaggatatcctggaccaaaaggagacaaagggcatggaggttttcctggagct
ccaggcccaaaaggtgacaaaggtcatggaggtctcccagggcaggaaggccttcctgga
cccaacgggccaccgggcctgcccggttccattgggccacctgggggtcttggtttccca
ggtccgaagggagaaggtggcaatggagggccaaaggggctgccaggtcctaaaggtgag
ccagggcctccagggcttcctggacagggtgggtatcctggagagggtggtcaaccagga
ccgagaggtataccagggccactgggtccgaaaggggataacggccacaaagggttacct
ggcctccctggagctcctggaatgcccggttcaaggggagaaggtggaatgcccggagaa
aaaggtcaccagggacccaagggaatccctggaaattttggtccaggtgggccacttggt
cctcccggtcttcccgggccaaaaggcgaacttggtcctccagggaaacctggctaccct
ggcgaaggtaaacctggtgttccaggcgctttagggccccaagggaaacctggcaacggt
ggaccccctggtcagcctggacaaccaggacaacctggtccccctggcccacccggaccc
cccacccaaccacctggtcttggtgaaatcctccctgcgctgggtcctggtctggacggt
cttaaacaaggcggttacaagaaaccgaagaatggaggggacagggacggcctggagatg
ccagcattcacggctcagctcaccaatcctttcccccccgtaggctcccctgttgtcttc
gacaagctcctgtacaatggccatcaagactacaatcctcaaaccggcatcttcagctgt
accataccgggaatctattactttgcttaccacgtccactgcaaaggagcgaatgtgtgg
gtggcgctggtcaagaacaatgagcctgtgatgtacacatatgatgagtacaaaaagggc
agcctggaccaggcgtcagggagtgctgtgctccctttacagcaaggagacactgtgcat
ctacagcttccatctgaccaggcagcaggactttatgccggtcaatatgtccactcttca
ttctccggatatttattgtacccaatgtaa
DBGET
integrated database retrieval system
