Oncorhynchus keta (chum salmon): 118370314
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Entry
118370314 CDS
T09424
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04060
Cytokine-cytokine receptor interaction
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118370314 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118370314 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oke04052
]
118370314 (gdf5)
Cytokines and neuropeptides [BR:
oke04052
]
Cytokines
Transforming growth factors (RSTK binding)
118370314 (gdf5)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
118370314
NCBI-ProteinID:
XP_035611163
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Position
37:752488..758092
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AA seq
391 aa
AA seq
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MQTGKGSGRPGQSKGNTVPRAATPARTGQQKVVDVQKHIVRFAQMSVKATGKLKGRYSPK
LLLVTPHDYMLSLYWSLSTGGVNTSVLHEAGMANTITSFVDKGQDARIPQLRRQKYYFNI
SSLEKEGLLGAELRILRKRLADPHKALSTDRVVCLKLFTCVAGKQKATLLQTQTIKDHNS
PKWEVFDIWKLFKNFKNTVQLCFELEGLERGRPVDLRTLGFSRLGRQTKEKAFFLMFGRT
KKNDLFYNEIKARSGHDNKTVYEFLFTQRRMRRAPTNRGKKLAKNPKPRCHRKQLHVNFK
EMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPDSTPPTCCVPTR
LSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaggcaaaggctcaggcaggcctggacagagcaaaggaaacactgtccccaga
gctgcaacaccagcacgaactggacagcaaaaggtcgttgatgtgcaaaagcacatcgtt
cggtttgcccaaatgagtgtcaaagcaacgggcaaacttaagggcagatactctccaaag
cttctattggtaactccgcatgactacatgttgtcactctattggtcactatccacggga
ggggtgaacactagtgtgctgcacgaggctggcatggccaacaccatcacaagctttgtg
gataaaggacaagatgcccgtattccccagttgagaagacagaagtattacttcaacatc
agttccctggagaaggaggggttactgggtgctgagctgcgtatactcaggaaaagactg
gctgatccacacaaagcactttccactgacagagttgtctgcctgaagcttttcacttgt
gtagcaggtaaacagaaagccacactgctccaaacgcaaaccatcaaggaccacaattcg
cccaaatgggaagtgtttgacatttggaaactattcaagaatttcaagaacaccgtccag
ctttgctttgagctggagggtttagaacggggacgccccgtggacctcaggacactgggc
ttcagtcgcctgggcaggcaaaccaaagagaaggcctttttcctcatgttcgggcgcacc
aagaaaaatgacttgttctacaacgagatcaaagctcggtctggccacgacaacaagact
gtgtacgaattcctgttcactcagcggcgcatgcgccgagctccaaccaaccgcggcaag
aagctggccaagaaccccaagcctcgttgccacaggaagcagctgcacgtcaacttcaag
gagatgggctgggacgattggatcatcgccccactagagtatgaggcctaccactgcgac
ggggtatgcgacttccctattcgctcgcacctcgagcccaccaaccatgccatcatccag
acgctcatgaactccatggaccccgactcgactccgcccacctgctgcgtgcccactcgc
ctcagcccaatcagcatcctctacattgactcggccaataacgtggtctacaaacagtat
gaggacatggtggtggagtcctgtggctgcaggtag
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