Oncorhynchus keta (chum salmon): 118370351
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Entry
118370351 CDS
T09424
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118370351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118370351
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118370351
mRNA degradation factors
5'-3' decay
Lsm complex
118370351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118370351
NCBI-ProteinID:
XP_035611202
LinkDB
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Position
9:complement(18220720..18225915)
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AA seq
147 aa
AA seq
DB search
MRFTSRPKMNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLQQTVERIHV
GKRYGDIPRGIFIVRGENVVLLGEIDLEKESDTSLQQVCIEDILEEQRLQQQSRQEAEKT
KHLALKERGLVMPRPDIMDEYGVQHQY
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaagccgaccaaaaatgaactacatgccaggaacagccagcctcatcgag
gatatcgataaaaaacatctcgtcctgctcagagatggaagaacgttgatcggctttctc
agaagcattgatcagtttgccaacctggtgctgcagcagacggtggagaggatccacgtg
ggcaagaggtatggagacatccctcgaggaatctttatcgtcaggggagagaacgtagtc
ctcctgggggagatcgacctggagaaggagagtgacaccagtctgcagcaggtgtgtatt
gaggacatcctggaggaacagcgactgcagcagcagagcaggcaggaggcagagaagacc
aaacacctggccctgaaggagagaggcctggtcatgcccagaccagacatcatggacgaa
tatggagtacagcatcaatactga
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