Oncorhynchus keta (chum salmon): 118370373
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Entry
118370373 CDS
T09424
Name
(RefSeq) vinculin isoform X3
KO
K05700
vinculin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04520
Adherens junction
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
oke05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118370373
04520 Adherens junction
118370373
09142 Cell motility
04820 Cytoskeleton in muscle cells
118370373
04810 Regulation of actin cytoskeleton
118370373
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118370373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118370373
04147 Exosome [BR:
oke04147
]
118370373
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118370373
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118370373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
NEMO
DUF7603
Motif
Other DBs
NCBI-GeneID:
118370373
NCBI-ProteinID:
XP_035611224
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Position
2:complement(52117578..52193633)
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AA seq
1128 aa
AA seq
DB search
MPVFHTKTIEGILEPVAQQISHLVIMHEDGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENACSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEIVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLFNSLNTVKQLLPVLISAIKIFVATKSTHSAGVDEAERNRCFTFEKMSAE
ISEIIRVLQLTTWDEDTWANKDMECMKRSLAVIEAKMTMAKGWLKYSHGQPGEPGDVAVR
VILDEAGKVGELCAGRERRDTLGAAKTLGQMTDQVTELRVRGHGLSPPCVQRASQCSQGL
DLLLGKVDGATHRLEALTKAKLAFARRLDAAQAWLADPNGGPEGAENIRALLANAQKIAD
LCEDLLERDDIQRSINEIAGLTARLVELRKRGKGDSPEVRALCKLIGAALLTLQAKTNRA
VANMRPAKPAITLQGKMEQALRWVNNPGQDDRGVGQAAIRGLLSEGRRLAGGLGGPYRQD
MIVCCDRNEALMTSLADIAGRGEAEAPQAKATASQLQESLKDLKGRMQEVMTQEVSDVFS
DTTTPIKLLAVSATAPPEAPHREEVFDERAGNFEAHAGRLGATAEKAAAVGSANKNTVEG
IQATVKHTRELTPQVTSAARILLKNPGNQAAYEHFDTMKNQWIDNVEKLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAIANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPWFR
EAVKRASDILSHTISPMVIDAKAVAGNIQYPALQKAFLDSCLRILAAVGKVREAFSLPEP
DFPPPPPDLDKLHVSDQEQAPPKPPLPEGEVPPPRPPPPEEKERDKDEDFPEQKAGELLS
EPMMVAARQLHDEARKWSSKPEEEEGVEVDDEDEFTDGEDDYEPELLMMPSNGNAVNQPI
LAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRAMIQCAKDIAKAS
DEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQ
ATEMLVHNAQNLMLSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgttccacacgaagaccatcgagggcatccttgagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggacggggaggtggacgggaaggccatcccggatttg
accggcccggtggccgcggtacaagcagcggtcagtaaccttgtcagggtgggaaaggag
actgttcagacaacagaggaccaggtgatgaagagagacatgcctcccgccttcataaag
gtggagaatgcgtgttctaagctcgtgcaggcagctcagatgttgaaggcggatccctac
tctgtccctgccagagactacctcattgacggttccagaggaatcctgtctggaacctca
gacctgctgctcactttcgacgaagctgaggtgcgtaagatcattcgtgtgtgtaagggg
atcctggagtatttgactgtagctgagattgtggagaccatggaggacctgatcacctac
accaagaacctaggaccaggtatgactaagatgtctaagatgattgaggagcgacagcag
gagttgacccatcaggaacacagacagatgctattcaactccctgaacactgtcaaacaa
ctactgcctgtactcatatcagccataaagatatttgtagcgactaagagcacgcatagt
gctggggtggatgaggcagagagaaacagatgctttacgtttgagaagatgagtgctgag
attagtgagatcatcagagtcctacagcttaccacctgggatgaagacacatgggccaac
aaggacatggagtgtatgaaacgttctctggcggtgatagaggctaagatgaccatggcg
aaaggctggctcaaatactcccatggacaaccaggcgagcctggggatgtagcggtgcgc
gtgatattggatgaggcagggaaggtaggagaactgtgtgctggaagggaacgcagagac
acacttggagcagcaaagactctgggacagatgactgaccaggtcacagagctacgtgtc
agaggacatggtctgtccccaccatgtgttcagcgggccagtcagtgttctcagggtctg
gacctgttgcttgggaaagtggacggtgccacccacaggctcgaggctttaactaaagct
aaactggcattcgctaggagactggatgctgcccaggcatggctggcagatcctaatggg
ggtccagagggtgcagaaaacatcagagccttgctggccaatgcccaaaaaatcgctgac
ctgtgcgaagacctcctcgagagagacgacatccagagatccatcaatgagattgcgggg
ctcaccgcacgactagtggagctacgcaagcggggtaaaggggacagtccagaggtgcgt
gcgctatgtaaactcattggagcagctctcctgaccctgcaggctaagaccaacagagcg
gtggccaacatgaggcctgccaaaccagccatcactctgcaaggcaagatggagcaggcc
ctacgctgggtcaacaaccctggacaggatgacaggggtgtgggtcaggcagcaatccgg
ggcttgttatcggagggccgccggttggctggagggctgggggggccgtatcggcaggac
atgattgtctgctgcgatcgcaatgaggcgctgatgacatcactggcagacatagcgggg
aggggagaggccgaagccccgcaggctaaagctactgcttcacaactacaggaaagtctg
aaggacttgaagggtcgtatgcaggaagtcatgacccaggaagtatccgatgtgttcagt
gacaccaccacccccattaaactactggctgtgtctgcgactgcccccccagaggcccca
cacagagaagaggtgtttgatgagcgtgctggtaactttgaggcccatgcgggtcgcctg
ggcgcaacagcggagaaggcggcggccgtgggatcagctaataaaaacacagttgaggga
atacaggctaccgttaaacacaccagagaactcactccacaggtgacctccgcagctcgt
atcctgttgaagaatccaggtaaccaggcggcctacgaacactttgacaccatgaagaac
cagtggatcgacaatgtagagaaactcactggtctggtggatgaagccatagacaccaag
tctctgctggatgcgtctgaggaggcgataaagaaggacatcgataagtgtcgtgtcgcc
atagcgaatgtacagccacagatgctagttgccggggcgaccagcatagctcggcgagcc
aatcgcgtacttctggtagcgaagagagaggtggagaactcagaggacccatggttcaga
gaagcagtgaaacgtgcatcagatatacttagccacactatatcacctatggttatagac
gctaaggctgtggccggaaatatacagtacccagcccttcagaaggcctttttagattct
tgcctcagaattctggctgctgttgggaaggtcagagaagccttcagcctcccggaacca
gacttcccccctccacccccagacctagacaagctacacgtgagtgatcaggagcaggcc
ccgcctaagccccccctaccagagggagaggtgcccccaccccgccccccacctccagag
gagaaagagagagacaaagatgaagactttccagagcagaaggcaggagagctgctcagt
gagcccatgatggtggctgctaggcaactacacgatgaggcacgcaagtggtccagcaag
cctgaggaagaggagggtgtagaggtagatgatgaagacgagtttactgacggtgaggat
gactatgagccagagctgttaatgatgccgtctaatggcaatgcagtaaatcaacccatc
ctagccgccgcacaatcgcttcatcaggaggcgcgcaagtggtccagcaagggaaatgac
atcattgcggcggccaagaggatggcgttgctgatggctgagatgtctcggttggtacgt
ggcggcagcggtaataagcgggctatgatccagtgtgctaaagacattgccaaagcctcg
gatgaggtcacccggttggccaaagaggtggccaagcagtgtactgaccgacgcatcaga
accaacctgctgcaggtgtgtgagcgtatccccaccatcagtactcagctgaagatcctg
tcaacagtcaaagccaccatgctgggacgaaccaacatcagcgaggaggagtctgaacaa
gctacagagatgctggtccataatgcccagaacctgatgctgtcagtcaaggagaccgtg
agagaggccgaggctgcttcaatcaagatccgcaccgatgcaggcttcaccctgcgctgg
gtccgcaagaccccctggtaccagtaa
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