Oncorhynchus keta (chum salmon): 118370593
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Entry
118370593 CDS
T09424
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118370593 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118370593 (usp9)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118370593 (usp9)
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118370593 (usp9)
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118370593 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
118370593
NCBI-ProteinID:
XP_052378108
LinkDB
All DBs
Position
7:complement(19644698..19728468)
Genome browser
AA seq
2650 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTASPNSTNENSPVSPPDEQGQGDGP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELMAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVR
AGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYAA
IINIITSKGYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCRE
GKLVAKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEI
HEDFIQSCFDRLKASYDTLRVLDGDKDSINSARQEAIRMVRVLTVLKEYINECDSDYHEE
RTILPMSRAFRGKHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTK
IELFIGGDVVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHG
NHFSDGPNPEVESCLPGVIMSLHLRYISFLWQVADLGCGINMPLLRDGARVLMKLMPPDN
STVEILRAMCLDHAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDAS
DFQYNFLKSGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVA
EACQPNAEGTIPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFF
QASKYIPDICVIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDEEDEQVCCE
ALEIMTLCFSLLPTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGH
RPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWL
KRIRDEVKRTGETGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFI
FPASNVYLQYMKSGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVDTLTDMY
YLGCEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTG
TDVDDDMSGDEKQENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFG
HLASSRLQYYIPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSK
VLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCE
KCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGV
AKLEGDDVNPENQVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGA
DGERNRWYKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYI
LFYERMDSLDKDSELVKYIQELTISSSSNNKPPHQVKMPGVIECSVRKQNVQFMHNRMQY
SLEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRG
PASDWYDALCVLLRHSKNVRYWFAHNFLFAYTNRFSEYLLECPSAEVRGAFAKLIVFIAH
FSLQDGPCPSPTASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLF
VMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVA
VRMQSSINGNPPLPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKL
LRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGI
PDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWL
GDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTK
HGEAVSEEDAAMRKSSSPQQLLPGEGTGQQHTEPDDQEAPEDQDTSPPDDISLYPHLSPG
TTTQFQQQNNHPHGQPYTGPAAQHMNNPQRPVPSSATGPAPGTGPQAQDNWESTEEVPST
TSLAPAPPKE
NT seq
7953 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctcctgttgggggaaacgacaaccaggcaggccaggcg
cccgacgctcagagtcagagccagcccccgctgccacagaaccagacggcgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggatggcccc
ccccagctggaggaggaggagcctgccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggtggttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaaatgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctttctcaggactggttccccttgctggagctgatggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgcccgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatttggctcgttaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
ccttttgggcagtgttacgagttcctaacattgcacacggtgaagaagtacttcctgcct
gtcatcgagatggttcctcagtttctggagaacctgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctgtccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaggagaccgttaagagtttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtcatctcaagtgtgtcctactatacacatcgacatggcaaccctgaggaa
gaggagtggcttactgcagagcgcatggcggagtggatccagcagaaccacatcctgtcc
atcgtgctgagggacagtctgcaccagcctcagtacgtagaaaaactagagaagatactt
cgcttcgtcatcaaagagaaagctcttaccatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcc
tgggacttctcccctgagcagctcgaccacctttttgactgcttcaaggcgagttggacg
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggagtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgacgtgcctgtagacatcatggaccaggctctcagtgctcacatcaagatactggac
tacagttgctctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagaaagaaaattcctattaacatacaaacg
aacttagcgggtcagactcagaggagtcctcatgtgttctatcgccatgacctgatcaac
cagctccaacacaaccatgccctggtcacgctcgtggctgagaacctctctgcctacatg
gagaccatgaggcagttctctaaagccgagcaggcagagtttgacccccagacggtgagg
gcagggagccgctacagccacgtacaggaagtccaggagagactcaacttcctgaggttc
ctgctgaaggatggccagttgtggctctgtgctcctcaggccaaacagatctggaagtgc
ctggccgaaaacgctgtcttcctatgtgatagagaggcctgcttcaaatggtacgctgcc
atcatcaatattatcacctcaaaagggtactccaagctgatgggagatgagccagacctg
gacccagacattaacaaggacttctttgagaacaacgtcctccagctggacccatctctg
ctcacagagaacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgtcgggag
ggaaagctggtggccaaacgcagggcctacatgatggacgacctggagctcataggactg
gactacctctggagggtcgtaattcaagggagcgatgacatcgccagtcgagccatagac
ctgctgaaagagatctacaccaacctcggaccaaaactacaagtcaatcaggtagagatc
cacgaggatttcatccagtcgtgcttcgaccgtctgaaggcgtcgtacgatacgctgcgt
gtcctggacggggacaaggacagcatcaactcggcccggcaggaagccatccgcatggtc
cgtgtgctcactgtgctcaaggagtacatcaacgagtgtgacagcgactaccacgaggag
aggaccatactgcccatgtccagggcgttccgggggaagcacatcacgttgaccgtgcgt
tttcctaaccagggccgtcaggtagatgacctggacatctggtctcacaccaacgacacc
atcggctcggtgcgccgtggcatccttacacgcatcaaggccaacgccacgcacaccaag
atagagctcttcattggcggggatgtcgtcgacccagccgatgacagaaagctgattggc
cagctcaacctcaaagacaaaacgttgatcacagccaagctgacccaggtgagtgccaac
atgccgtccagcccagacagctcctcggactcttccaccggctcacctggtaaccacggc
aaccacttcagcgacgggcccaacccagaggtggagagctgtctccctggagtgatcatg
tctctccacctgcgctacatatctttcctgtggcaggtagcggacctgggctgtggcatt
aacatgcctctgttacgagatggagccagggtactcatgaagctaatgcctccagataac
agtaccgtggagatcctgcgtgccatgtgtctggaccatgccaagctgggagagaacagc
ctcagccccacactggactcgcgcttctttggcccctcgccatcacaagtcctctacctc
atagaggtggtgtatgccctactcatgccagccagtgccacattgggggaggatgccagc
gacttccagtacaacttcctgaagagtggcgggctgcctcttgtactgagcatgctcaca
cggaacaacttcctgccttcggccgacatggagacacggcgaggggcgtacctcaacgct
ctgaagatcgccaagctgctgctcaccgctgtggggttcggacacgttaaagctgtggcc
gaggcctgccagcccaatgctgaggggaccataccagtctcaccgatcaaccaggccact
catgaccaagccctggtcctccagagtgccctgcaaaacatccccaaccctgcctcggag
tgtatgctccgcaacgtagctatacgcctggctcagcagatctctgacgagaacttcttc
caggcgtccaagtacatcccagacatctgtgtgatccgggcggtgcagaagatagtgtgg
gcgtcgggctgtggcaccgtacagctagtctttagctccaacgaagagatcagcaagatc
tatgagaagacaaatgcggctaaggagccggacgaggaggatgagcaggtgtgttgtgag
gccctggagatcatgaccctgtgtttctccctgctgcccaccgctctggacacactcagc
aaggagaaggcctggcagaccttcatcatagacctgctaatgcactgccacagcaagtca
gttcgtcagatggcccaggagcagttcttcctcatggccaccaggtgttgcatgggccat
cgaccccttctcttcttcatcaccctcctcttcactgtgctggggagcaccgctaaggag
cgggccaagcatgctggggactacttcaccctgcttaggcacctcctgaactatgcctac
aacagcaacatcaacctgcccaacgcagaggtgctgctcaacaatgaaatcgactggctc
aagaggatcagggatgaggtaaagaggacaggggagacgggcgtagaggaaaccatcctg
gagggccacatcgggatcaccaaggagctgctggcctttcagacatcagagaagaaatac
tacatcggctgtgagaagggaggggccaacctcatcaaggagttgatagatgacttcatt
ttcccagcatcgaacgtgtacctgcagtacatgaagagtggggagttccccacggagcaa
gccatccctgtctgtagcagccccgcctctatcaacgcaggcttcgagctgctggtggcg
ctggctgtgggctgtgtccggaatctaaagcagatggtcgacacgctcactgatatgtac
tatctaggttgtgaggctctgacagagtgggagtatctccccccggtgggaccgaggccc
actaaaggctttgtgggactgaagaacgccggagccacctgctacatgaactctgtcatc
cagcagctctacatgatcccgcccatacgcaacggcattctggccatcgagggcaccggc
accgatgtggacgatgacatgtccggtgatgagaagcaggagaacgagagtaatgtggac
ccgcgagatgaggtgttcaactaccaccaccagtttgacgacaagccatcgctcagtaaa
tcggaggacaggaaggagtacaacatcggggtgctgcgccacctgcaggtcatctttggc
cacctggcctcctccagactgcagtactacataccgagaggcttctggaaacagttcagg
ttatggggcgagcctgtgaacctgcgagagcagcacgatgccctggagttcttcaactct
ctagtggacagtctggacgaggctctgaaagccctgggtcacccagccatgctcagtaag
gtgctgggtggatcctttgctgaccagaagatctgccaggggtgcccacataggtatgag
tgtgaggagtcgttcaccactctgaatgtagacatcaggaaccaccagaacctgttggac
tcaatggagcagtacgtcaaaggagacctgctggagggtgctaacgcataccactgtgag
aagtgcaacaagaaggtggacacagtgaagcgtctgctgatcaagaagcttcccccagtg
cttgccatccagctgaagaggtttgactacgactgggagagggagtgtgccatcaagttc
aacgactactttgagttccccagggagctggacatggagccctacactgtagccggggtg
gccaagctggagggggacgacgtcaacccagagaaccaggtgatccagcagaacgagccc
tctgaaccagagcctccgggcagctccaagtaccgcctggtgggggtgctggtccactca
ggccaggccagcggcggacactactactcctacatcacacagaggaacgtgggcggggca
gacggcgagcggaaccgctggtacaagtttgacgacggcgacgtgacggagtgcaagatg
gacgacgaggaggagatgaagaaccagtgcttcggaggggagtacatgggcgaggtgttt
gaccacatgatgaagaggatgtcgtaccggcgtcagaagcgctggtggaacgcatacatc
ctcttctacgagcggatggactcactggacaaggacagcgagctggtcaagtacattcag
gagctgaccatctcgtcctcgtccaacaacaagccgccgcaccaggtcaagatgcccggt
gtaatcgagtgcagtgtgcgcaagcagaatgtgcagttcatgcacaaccgtatgcagtac
agcctggagtatttccagtttgttaagaaacttctgacctgtaacagtgtctatttaaac
cctccgccaggacaagaccatctactgcctgaggcggaggagatggctatgattagtgtt
cagctggctgctaagttcctattcagcactgggttccacaccaagaaagtagtgaggggg
cccgccagtgactggtatgatgcactttgcgtcctgctgagacacagtaagaatgtacgc
tactggtttgcacacaacttcctgtttgcctacaccaaccgcttctccgagtacctgctg
gagtgccccagtgcagaggtccggggcgcgtttgccaaactcatcgtcttcattgcacac
ttctccctgcaagacggaccctgcccctcccccactgcctctcctgtcggagcctccacc
caaccacaggcatgtgataacctgagtctcagtgaccacctgttgaggactgtattgaac
ctgctcaggagagaggtgtcggagcacggccgacacctgcagcagtacttcaacctcttc
gttatgtatgccaacctggggctggcagagaagacccagttgttgaagctgagtgtccca
gctaccttcatgctggtggctttagacgaggggcctggccctcccataaagtaccagtat
gctgaactaggcaaactgtacaccgtagtctcccaactggtgcgctgctgtgacgtggcc
gtgcgcatgcagtcctccatcaatggtaacccccctctccctaacccgtacggtgatgcc
aaccagaccaccccggtgatgcctgtgcagcagctggtgggagagatcctgttcgtaagg
accagctatgtgaaaaagatcattgaggactgcagcaactcagaggagacggtcaagctg
ctgcgcttcagctgctgggaaaacccccagttctcctccactgtactatcagagctgctc
tggcaggtggcgtactcgtacacctacgagctgaggccttacctggacctgctgctgcag
atcctgctcattgaggactcctggcagactcacaggatccacaacgtgctgaagggtata
ccagatgacagggatggcctatttgacaccatccagcgctccaagaaccactaccagaaa
cgggcctaccagtgtatcaagtgtatggtagccctcttcagcaactgctctgtggcctac
cagatactacagagtaacggggacctgaagcgtaagtggacgtgggcagtggagtggctc
ggtgacgagctggaaaggaggccctacacagggaaccctcagtacacctacaacaactgg
tctcccccagtccagagcaacgagacctccaacggatacttcctggagcgctcgcactcc
gcacgcatgaccctggccaaggcctgtgaactctgccctgaggagtgtcacttaacgaag
cacggtgaggcggtgtctgaagaagatgctgccatgcggaaatcgtcctcgccacagcag
cttttgccaggggaagggacaggacagcagcacactgagcccgatgaccaggaagccccg
gaagatcaggacacctcccctccagatgacatctccctctaccctcatttgtctccgggg
actacgacacagtttcagcagcagaacaaccacccccacgggcagccgtacacaggccca
gctgcccagcacatgaacaacccccagcgccctgtcccttcctctgccacaggccctgcg
cccggcacaggcccacaagcacaagacaactgggagagcactgaggaggtcccctccacc
acctccttggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
