Oncorhynchus keta (chum salmon): 118370634
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Entry
118370634 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118370634
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118370634
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118370634
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118370634
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118370634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
FlhC
Motif
Other DBs
NCBI-GeneID:
118370634
NCBI-ProteinID:
XP_052377593
LinkDB
All DBs
Position
6:complement(41589901..41633741)
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AA seq
931 aa
AA seq
DB search
MSDQGDICPHLNSIGEVTKEELLQKSKGSCQSCGVGGPNLWACLQSECQYVGCGETFSDH
STLHAQANKHNLTVNLTTFRIWCYVCEREVFLEQRPAVVPAMSATHTPHHCKAKEHQDAV
HQPVSHHHPLKAVPIAVAEEDWSESEEDVLKPRGLTGMKNIGNSCYMNAALQALSNCPPL
TQFFLDCSGLVRTDKKPALCKSYQKLISELWHKKRPSYVVPTSLSQGIKLVNPMFRGYAQ
QDTQEFLRCLMDQLHEELKEPQVECGGGGEGDERRDEGDRSPSEDEFLSCDSGASSDRGE
GGGLGEPELLIQDECGVGPRVGRGGTGTGRGVGTGGPISEKERLKEKRVLGSPLHRGSQE
MDEDADVDTTVAEEGGLERGAEEEEGTPPSPRPQEPDNEASMQKRPHSRPCSPVRTVQEL
HPKLSPSPTRSSPFRSAGPEYSFKKAQLFLGAKKQKQSHYRSVISDIFDGSILSLVQCLT
CDRVSTTVETFQDLSLPIPGKEDLAKLHSSIHQNLPAKTGVSLDVYGSQGWITYIMDSIR
RFVVSCIPSWFWGPMVTLEDCLAAFFVADELKGDNMYSCERCKKLRNGVKYCKVLRLPEI
LCIHLKRFRHEVMYSFKINSHVAFPLEGLELRPFLAKDSPSQITTYGLLSVICHHGTAGS
GHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEESVRERQKVVDLAS
MKEPSLLQFYISREWLNKFNTFTEPGPISNHTFLCQHGGIPPNKYHYIDDLVVILPQNVW
EYLYNSFGGGPAVNHLYVCAICQVELEALAKRRKVEIDTFIRLNKEFQAEEAPTVILCIS
MQWFREWESFVKGKDNEPPGPIDNSKIGVMKGGHVQLKQGADYGQISEETWQYLLCIYSG
GPEIAVRQTVPATNTDSLHGERKIEAETRAL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccagggggacatttgtccccacctgaattccataggggaggtaaccaaggag
gagcttctgcagaaatccaagggatcctgccagtcgtgtggagtgggaggtcccaacctc
tgggcctgtctgcagagcgagtgtcaatatgttggctgtggagaaaccttttcagaccac
agcaccctacatgcacaggcaaataaacacaacctgacggtgaacctgaccactttcagg
atctggtgctatgtgtgtgagagggaggtgtttctggagcagaggcctgcagttgtacct
gctatgtctgccacacacactccccaccactgtaaagctaaggaacaccaggatgcagtt
catcaaccagtgagtcaccaccacccgttgaaagcagtccctatcgcggtagccgaagaa
gattggtcagagtcagaggaggatgtgctcaaacccagaggtttgaccgggatgaagaat
attggtaactcctgctacatgaacgcagcgcttcaagccctgtccaactgtcctcctctc
actcagttcttcctggactgcagtggactggtgcggactgacaaaaagcccgcactgtgc
aaaagctaccagaaactcatctctgagctctggcacaagaaacggcccagttacgtagtc
cccaccagtctgtcccagggcatcaagctggtcaaccccatgttccgtggctacgcccag
caggacacccaggagttcctgcgctgtctgatggaccagctccacgaggagctcaaagag
ccacaggtagagtgtggcgggggaggggagggggatgagaggagggatgagggcgaccgc
tccccctctgaggacgagttcctctcctgcgactcaggtgccagcagcgaccggggggag
ggagggggactgggggagcccgagctgctcattcaggacgagtgtggggtggggccgaga
gttggaagaggggggacaggcacgggcagaggggttggcacaggggggcccatctcagag
aaagagaggctgaaggagaaaagggttttgggctcgcccctccacaggggctcccaggag
atggacgaggacgctgatgtggatacgacagtggccgaagagggtggtctggagagggga
gcggaggaggaggaggggaccccccctagccctaggccacaggagccagacaatgaggca
tcgatgcagaagcgcccccattctcgcccctgcagccccgtccgtactgtccaggaactg
caccctaaactctcccctagccccactcgctccagccccttccgctctgcagggcccgaa
tactcttttaagaaagcccagctgttcctgggtgccaagaagcagaagcagtctcactac
cgcagcgtcatctcagacatcttcgacggctcaatcctcagcctggtccagtgtctgacg
tgtgacagggtgtcgaccacagtggagaccttccaggacctgtccctgcccatcccaggt
aaggaggacctggccaagctacactcctccatccaccagaacctcccagccaagaccggg
gtatctctggacgtctacggctcccagggctggatcacctacatcatggactccatacgc
aggtttgtggtgtcctgtatccccagctggttttggggtcctatggtcacactggaggat
tgcctcgccgccttcttcgtcgctgatgagctcaaaggggacaacatgtacagctgtgaa
aggtgtaaaaaattgagaaatggtgtaaaatattgcaaagtacttcggctacctgagatc
ctgtgcatccacctgaaacgttttcgccacgaggtgatgtactccttcaagatcaacagc
cacgtggccttcccattggagggcctcgaactccgacctttcctggccaaggacagcccc
tcccagatcaccacctatggcctgctgtccgttatctgtcaccatggcaccgcaggcagt
ggtcactacatagcgtactgtcagaacgtgattaacggtcagtggtacgagtttgatgac
cagtatgtaacggaggtccatgagactgtggtgcagaatgctgaggcctatgtgctcttc
tacaggaagagcagtgaggagtcggtgagggagaggcagaaggtggtggatttagctagc
atgaaggagccaagcctgctgcagttctacatctccagagagtggctgaacaagttcaac
actttcactgagccagggcccatcagcaaccacaccttcctctgccagcacggagggatc
ccgcccaataagtaccactacatcgacgacctggtggtgatcctgccgcagaacgtgtgg
gagtacctgtacaacagttttggaggaggtccagcagtgaaccacttgtacgtgtgtgcc
atctgccaggtggagttagaggctttggccaaacgcaggaaggtggaaatagacaccttt
atcaggttgaataaagagttccaagcggaggaggctcctacagtcatcctgtgtatcagt
atgcagtggttcagagagtgggagagctttgtcaagggcaaagacaatgagccccctggt
cctattgacaacagtaagatcggtgtcatgaaagggggacacgtacagctcaagcaaggg
gctgactatggtcagatctcagaggagacgtggcagtatctcctctgtatctatagtgga
gggcctgagatcgcagtgagacagacggtgccggccaccaacacagacagcctgcatgga
gagcggaagatcgaggcagagaccagggcactctga
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