Oncorhynchus keta (chum salmon): 118370690
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Entry
118370690 CDS
T09424
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118370690 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oke04030
]
118370690 (smo)
G protein-coupled receptors [BR:
oke04030
]
Frizzled / Smoothened family
118370690 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
118370690
NCBI-ProteinID:
XP_052365219
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSSRGWSSIVGGLGMLCVWAVSFLVTHAVTVQRNETIFNDFCKKTTTCEVLKYNTCLGSP
LPYTHTSLALAEDSSTQDEAFEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCDNGQVELP
SQHLCQATRRPCSIVDQERGWPNFLKCEETDKYPMGCTNEVQKLKFNTSGHCEAPLVKTD
VQASWYKDVEGCGIQCNNPLFTDEEHSDMHAYIAVFGTVTLLCTFFTLATFLADWKNSNR
YPAVILFYINTCFFMGSIGWLAQFMDGARKEIVCKSDNTMRLGEPSSTETLSCVIIFSLV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHMVTWSVPFILTVAILATAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVIGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKVIGRSDDEPK
RIKKSKMIAKAFSKRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNGEPSNEMSSAWAQ
HVNKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKRKKRKKEA
RPLEELAEHQGYRQREFGTSSVPRLPKLPGHRSLVANLRQHREAEDVLPGSYPEFRPSHP
LPYQERYGGALEASSSQRSRYPDLNPLSLSDLPEDLGLGPRCRPQQPPLSFWQPNGAFHY
SGEVAPMAGLSGRTDHVGRSQGGQRRAEWGQIHSRTNLMEAELMDADSDF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgtggatggagttccattgttggtgggttggggatgctttgcgtttgggct
gtctcctttctggttactcatgcggtaacggtacagagaaacgaaaccattttcaatgat
ttctgcaagaaaactacaacatgtgaagtgcttaaatataatacatgtcttgggtcccca
ctaccgtacacgcacacgtctcttgccttggctgaagactcaagtacccaagacgaagca
tttgagaagttggccatgtggtctggtctgaggaacgcccctcgctgctgggcggtcatc
cagcccctgctgtgtgccgtctacatgcccaagtgtgacaacgggcaggtggagcttccc
agccagcacctgtgccaggctacgcgtcgcccctgcagcatcgtggaccaggagaggggc
tggcccaacttcctcaagtgtgaggagacggacaagtaccccatgggctgcacgaacgag
gtgcagaagctgaagttcaacacgtcgggacactgcgaagcccccctggtgaagacagac
gttcaggccagctggtacaaagatgtggagggctgcggcatccagtgcaacaaccccctg
ttcaccgacgaggagcactcggacatgcatgcctacatcgctgtgttcggcaccgtcacc
ctgctctgcacctttttcactctggccacctttctggcggactggaagaattcaaaccgt
taccccgccgtcatcctcttctacatcaatacctgtttcttcatgggcagtatcggctgg
ctggctcagttcatggatggagctcgcaaagagatcgtgtgtaagagtgacaacaccatg
cgtttaggggagccctcgtctactgagactctgtcgtgtgtcatcatcttcagcctcgtc
tactactccctgatgtctggggtgatctggtttgtcatgctgacctacgcctggcacacg
tccttcaaggccctgggcaccacccaccagcccctgtcgggaaagacctcatacttccac
atggtcacatggtccgtccccttcatcctcactgtggctattctagccaccgctgaggtg
gacggagactctgtcagtgggatctgtttcgtgggctataagaactaccgctaccgtgct
ggctttgtgttggctcccattggagttgtgcttgtcattggtggctatttcctcatacga
ggagtcatgacgttgttctccatcaagagtaaccacccgggtcttctgagtgagaaggca
gcgagcaaaatcaacgaaacaatgctaagacttggtatatttgggttcctggcgtttggc
tttgtcttaatcacgtttggctgccacttctatgacttcttcaaccaggctgagtgggag
aagagcttcagagaatatgtgttgtgcgaggccaatgtgacgatcgctcatcagaccaac
aagccgatcccagaatgtactatcaagaaccgtcccagtctactggtggaaaagattaat
ctgttctctatgttcggcacgggcatcgccatgagcacctgggtgtggaccaaggccacg
atcctcatctggaaacgcacctggtgcaaggttatcggccgtagcgacgatgagcccaag
aggataaagaagagcaagatgatagccaaggccttctccaagcgcaaggagctccacaaa
gacccggagaaggagctgtccttcagcatgcacactgtctctcatgacgggccagtagct
ggcatcaactttgacctgaacggggagccatccaacgagatgtcttcagcctgggcccag
catgtgaacaagatggtggccaggaggggcgccattctaccgcaggacatctctgtcacc
cctacagggacacctgttccaccgccagaggagaggaacaagctgtggatggtggaggcg
gagatctcccctgagatgatgaagaggaagaagaagaggaagaagaggaagaaggaggcg
cgtcctctggaggagctggccgaacaccagggctaccgtcagcgagagtttggcaccagc
tcggtgccacggctacccaagctgcccggccacaggagcctggtggccaatctgaggcag
caccgggaggctgaggacgtccttccaggctcttaccctgagtttaggccctctcatccc
ctgccctaccaggagaggtacggaggagccctggaggcctcctctagccagaggagcagg
taccctgacctcaaccccctctccctcagcgacctgccagaggacctcggcctggggcct
cgctgccgcccccaacaaccacccctctccttctggcagcccaatggagcgttccactac
tctggggaggtggcgcctatggcagggctgtctgggaggacagaccacgtggggaggtcg
caggggggtcaaaggagggcggagtgggggcagatccactctagaaccaacctgatggag
gcagagcttatggatgctgactctgacttctga
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integrated database retrieval system