Oncorhynchus keta (chum salmon): 118370703
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Entry
118370703 CDS
T09424
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118370703 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118370703 (ogg1)
Enzymes [BR:
oke01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
118370703 (ogg1)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118370703 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
118370703
NCBI-ProteinID:
XP_035611671
LinkDB
All DBs
Position
27:22353373..22361598
Genome browser
AA seq
401 aa
AA seq
DB search
MSQHALLSAGTKSWRSLACSRSELRLDLTLGCGQSFRWRETGNGHWTGVMGGRVWTLTQT
DDTLWYHTYNSPNTIGGDGRKRRAGSLLQGSKGSGKRSKGVIEVKEEEEGEPVAVTPDRK
EEELLNDYFQLKVKLGDLYRDWGAADPHFNSIAKIFTGVRMLRQDPTECLFSFICTSNNH
ISRIQGMVERLCQSLGTPLCQLDQTSYHDFPSLHALADNSVEACLRDLGFGYRARFLQQS
ARQILDSHGGPHWLQGLRSAPYLQARDALRTLPGVGPKVADCVCLMSLEKACVVPVDTHV
WQIAKRDYSCAAGNGQKSLTDRVHRQIGDFFRQLWGPYAGWAHSVLFCSDLKKFQKLKET
HSLKQEEEEKVKIKVEGEGINKNIIKMCNRKVNMSVKEEVE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgcattgctgtcggcggggaccaagtcatggcgctccctggcctgctca
cgatcagagctccgtttggacctcacactaggctgcggacagagcttccgctggcgagag
acagggaatggccactggaccggagtgatggggggacgagtgtggactctcacccagaca
gacgacacactatggtaccacacatacaatagccccaacaccataggaggggatgggagg
aagcggagggcaggttccttgctccaggggtcaaaggggtcagggaaaagatccaaggga
gtgatagaggtgaaggaggaagaagagggggagccagtggctgtgaccccagacaggaag
gaggaagagctgctgaatgattatttccagctgaaggtgaagctgggggatctgtacaga
gattggggagcagccgacccacactttaacagcattgccaagatcttcacaggtgtgcgt
atgctgcgtcaggaccccacagagtgcctgttctccttcatctgcacctctaacaaccac
atctctcgtatccagggcatggtggagaggctgtgccagtccttgggcacccctctgtgt
cagctggaccagaccagctaccacgacttcccctctctgcatgcactcgcagacaacagt
gtggaggcttgtctgagggacctggggtttgggtatagggccaggttcctgcagcagagt
gcaagacagatcctggactctcacggtgggccccattggctccaggggctccgcagtgcc
ccctacctgcaggcacgtgacgcgctgcgcaccctgcccggggtaggccccaaggtggca
gactgtgtgtgtctgatgtctctggaaaaggcctgtgttgtgcctgtggatacacacgtg
tggcaaatcgcaaaacgagactacagttgtgcggcgggcaacgggcagaagagcctcaca
gacagggtccaccgtcaaataggggacttcttcaggcagctgtggggtccttatgctggt
tgggcacactcggtgttgttctgttccgacctgaagaagttccagaagctgaaagaaaca
cactctctgaaacaggaggaggaggagaaggtcaagataaaggtggagggagagggaata
aacaagaacattataaaaatgtgtaatagaaaggtgaacatgtctgtgaaggaggaggtg
gagtga
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