Oncorhynchus keta (chum salmon): 118370862
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Entry
118370862 CDS
T09424
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118370862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118370862
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118370862
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
118370862
RAVE complex
118370862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
118370862
NCBI-ProteinID:
XP_035611956
LinkDB
All DBs
Position
14:13620947..13673756
Genome browser
AA seq
3021 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSINNQPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDSSLQGGQVAASYGSIVCVFEPVQLLNQKDRTSAELSYQWQKSGQFVLQSIVRNLAW
DPTGTRLLTGSASLQLWSNISDGFDEAGEQTDMTLGDPQCPWRCIWHCKTASPIQLMKFS
PDGEFFATAGQDDCLVKVWYGTSKWQSGVTKLFTPPEHNAQGELDFSFVYLAHPRTVTGF
SWRKTSKYMPRGSVCNVLLTCCKDSVCRLWAETLLPSDSLLSGHTLSHVNNNGQSSDSLK
SSSSKKTPSRIKTQDRNSLELNLQESWRAPLRGVAQPSLTGRLPTQQNSHHNHKTNSVPH
ANSLCHFHIAASINPATDIPLLPSITSLCGGDDEEPGGPFTVHWLNNKELLLTLAMEVFL
QQLRGSVEQNHSENSQEELDYEEVEEASRRAAEGGPDVASTQLPAAAVEHQVEVLLEDWN
RGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLSRSVV
MYACNKNVDLAIQHGRQRPAGLPHSSSVLIPYGQSKATSYSSSLRLSIFTPNVLMISTHS
DGSLNQWAVSFAEESAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTP
DVDSVPAPSTTLSQPFGGGPSRVSLGAVSQDPNAIYSELILWRVDPVGPLSFSGGVSELA
RINSLHSSAFSNVAWLPTLIPSNCLGVYCNSPSACFVASDGHSLRLYQAVIEAKKLLSEL
SNPDISKYVGKVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGSERREA
TQEAPPIETASSQPGFSARFFLVVVEFTQTGRSFLHMWHLQLAAGQITMDETGAPPEKEN
MTSSPMNSSFSFETFSSPSAQKNKPCTSNLQSASRLTLATHRLYSQELALPDGVEVISVT
PSAGHLSASSLQPAGGAPYLLATSCSDGKVRFWRCRVAAVEPDTKELTYTWEEWPLLVEE
GLGNSSAVTVSGRPVTVSCCHTSRIAVAYRHNPSPHLSPNPQQGVREPLVHVGLFQCEST
GGSHWVLEQTLVLDASTRTGNNNNNMESGVKDLNVENNNLDIYLPNDDCLGTSGKSLVHL
DWVSREDGSHILTVGIGSKLYMYGLLSGKPPELGLSEGPREQSSSRLVLLRSVDLVSSVE
GSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPALAKSTALNTTTTDMGSVSSLLAAMK
QSHEEGLNPVPPKKSLTRSMTSLAQKLSGKRTVYDLPAEMEDYGLFEAAHHLFPTLPQYH
PVQLLELMDLGKVRRAKAILSHLVKCIAGEIVALKDNGTNQDKRLRSRTISAGGSTSRDP
KLFSKGESSDYTEIDSIPPLPLYALLAADEDCSPKPKDKVTSLSGDSGHGSSQTDAYDEL
FQSSGVGVDDLEHMDSDQEDGCAKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPGLTRME
QMSLMALADTIATTSTDIRESQSRGKGGETLDECGLKFLLAVRLHTFLLTTLPPAHRAQL
LRQGLSTCHYAWAFHSEAEDELLHMLPALQKGDPTWPELRAMGLGWWLRSTNKLRRCIEK
VAKASFQRQNDPLDAAIFYLAMKKKAVVWGLYRSQKNAKMTTFFSNNFSEERWRRAALKN
AFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSSTYKRI
LQRHVLGQDRQLPAHQDPFLRSTAYWVLEDYSRALDTLLEQPAAPNLASSTQAGHTTQPG
STSSTSLCSPEVFNFYTYLRTHPLLLRRHFGSSEKTRVGLTAEGRMANSISLVERRLFFT
AAYAHLQAGCPMLALEVLSKMPKVVKRSKLPQDDTTNPDLSETKKEQASDLDWSQPALNG
FESVSDSLSNSQSDSVLSFDWGQPSVSVQDEALELKWDSDKEEEEDDDDEPQGLAMKSAD
NTSSVFQDAISPFTETLLDEGDFLMPSEDILAAQLKFSACLKILTTELRTLSTGYELDGG
KLRYQLCQWLEREVVALQRCCSYKPCLPELALGMAGPGGEEEAQAHPGEAQRTRRHWLQS
NQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESQQDDGVQSAVAPYLHHASIPLLLA
CTASAKTVVANPIVHLTNLTHDILHTINALDSPPHPDVVNNEIYVMHTLAASLSACIYQC
LCDGHNHSHVNQFTGIVYQSILSFQHHSVRTVSMEETVLPNTHPAQWPGISTLIRLLNSA
GEESQPGLAVLLCEILTAVFLSLFVHGLATHSSNELFRIVAHPLNSKLWVAVFGGGARTP
ITEKPCKDKSPPAANEEFDRKPRRFKLLSSSPRSASREGPETSSPTSPVVEQETSIFKEH
FVPPELSIWDYFIAKPFLPPSESRVEYDSEESQGSQDEDDDDDDEFGDFDPNSPSREHSN
PNSYSWCLMRLAMVQLVLGNLKSFYPMAGHDLLDLPVGSPLCHAVLKTLQRWEQVLLKRL
EIFGGPPSKYISTHPLDETAASGPAILRHKALFEPSITPFRSSHHSALPVKRLWQYLVKQ
EEVQETFIRNIFTKKRNQNESVEDLNENDKCSGMEEPSCNQSEADLGYPGGKARIIHKDS
DIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDTEAEAKGDDFLVIQAR
DDFNTLHGTTPYTHSSLGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPTLPYYLT
GAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGALRLWQTNTTGN
TPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVNPMNSLVHAFSCHE
SGATVLSLAPRQQLLITGGRKGWISVLELPHRHQRQSFQAHDSPVKALAVDPTEGSFISG
SAEGNIKVWSLSTQCLLHQFPNEHARQSLFRNLGTGVMQIEVGPANHIFSCGADGTMKMR
ILPDRFSVNNGNLKNDVKFII
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaccaagtccttactggggccgtcaacccaggggacaattgtttttctgta
ggtagcataaacaaccaaccattcacggcatatgcctctggctgtgacgttgtgattttg
ggcagtgactttgaaaggctacagatcatcccaggagcgaagcatgggaacatccaggtg
ggctgtgtggacagctcactacagggaggccaggttgcagcttcctatggaagtattgtc
tgtgtctttgagccggttcagctcctgaaccagaaggacaggacatcagcagaactgagc
taccagtggcagaagagtggacagtttgttttgcagtccatagtgcgtaacctggcctgg
gaccccacaggcactcgtctcttaactgggtccgctagcctgcagctgtggtccaatatc
agcgatggttttgatgaggcaggggaacagacagacatgacacttggtgaccctcagtgt
ccctggaggtgtatctggcactgcaaaaccgcctccccaattcagctcatgaagttctct
ccagatggagaattctttgctactgccggacaggacgactgtctggtcaaagtgtggtac
ggcacgagcaaatggcagtctggcgtgaccaagctgttcaccccaccggagcacaacgct
cagggcgagctcgacttctcttttgtctacctggcacacccacgcactgtaacaggcttc
tcctggaggaagaccagcaagtacatgccacggggttcagtgtgcaatgttctactgaca
tgctgtaaggacagcgtgtgtcgcctgtgggccgagaccctgcttcccagtgacagcttg
ctgtccggacacacgctcagtcacgttaataataacggacagagcagcgactcactgaaa
tcgtcaagcagcaagaagactccctctcgtatcaaaacacaggacaggaattccctggag
ttgaatctgcaggagtcgtggagagcccccttgagaggtgtggcccagccctccctaacc
ggccgcctcccgacccagcagaacagtcaccacaaccacaagaccaacagcgtgccccat
gccaactctctctgccacttccacatcgctgccagcatcaaccctgccacagatatcccc
ctgctgccctctatcacgtctctgtgtgggggagatgacgaggagcctggcgggcccttc
accgtgcactggctcaacaacaaggagctgcttctcaccctggccatggaggtgttcctg
cagcagctcagaggcagtgtggagcagaaccactcggaaaactcccaggaggagcttgac
tatgaggaggtagaggaggcttctaggcgagcggcagagggaggacccgatgtggcgtcc
acccagctgcctgctgcagcggtggagcaccaggtagaggtgctactggaggactggaac
agaggggcagacatgctgttcagtatccaccccatggatggctctctgctggtgtggcat
gtagactggctggatgaataccagcccggcatgttccggcaggtccaggtgtcctttgtg
tcccgaattcctgtggccttccccacgggcgacgccaactccctgagccgcagcgtggtc
atgtacgcctgtaacaagaacgtggacctagccatccaacatggccgccagcggcctgcc
ggcctgccacattcctcgtcggtgctgattccctacggccagagcaaggcgacctcctac
tccagcagcctccgcctcagcatcttcacccccaacgtgctcatgatctccacgcactcc
gatggctccctcaaccagtgggcggtcagcttcgcagaggagtcggccttctccactgtg
ctcagcgtgtcccacaagtcacgctactgcggccaccgcttccacctcaacgacctggcc
tgccactccctgctgcccctgttgctcaccacctcacaccacaatgctctgcgcaccccc
gacgtggacagtgtccccgccccctcgaccaccctttctcaaccctttgggggcgggccc
agccgggtgtccctgggcgctgtgtcgcaggaccccaacgccatctacagcgagctcatt
ctgtggagggtggatccggtgggacctctgtccttctctggaggggtgtctgagctggcc
aggatcaactctctccactcctccgccttctccaatgtagcctggctgcccacacttatc
cccagcaactgccttggtgtctactgcaactctcccagtgcctgcttcgtggccagtgac
ggtcactcgctgaggctttatcaggctgttattgaagccaagaaactactcagtgagctc
tccaacccagatatttcaaaatatgtcgggaaagtttttaacatcatcagccagcaatcg
actgctaaaccaggttgtatcatcgagctagatgccattactgacttccagggaaaggag
actcagctgctgcatgtgtttgaagaggatctgattctgggcagtgagcggagagaagcc
actcaggaagctccccctatagagactgcctccagccagccaggcttctccgcccgcttc
ttcctggtggtggtagagtttacccagactggcaggtctttcctgcatatgtggcacctg
caactggcagctggccaaatcactatggacgagaccggcgctccgcctgaaaaggagaat
atgacctcgtcgccaatgaacagctcctttagctttgagacgttcagctccccctcggcc
cagaagaacaagccttgcacgtccaacctgcagagtgccagtcgcctcaccctggccact
cacaggttgtacagccaggagctagctcttccagatggtgttgaggtgatcagtgtcacg
ccctcagcaggtcatctgagcgcgtcctccctgcagccagcaggtggcgctccctatctc
ctggccacttcctgttcagacgggaaggtgaggttctggaggtgcagggtggctgcagtg
gagccagacaccaaggagctgacgtacacctgggaggaatggcctctattggtggaggag
gggctgggcaacagcagtgccgtgaccgtgtcaggcagaccagtcacggtcagctgttgt
cacaccagccgcattgcagtggcctaccgacacaaccctagccctcacctgagccctaac
cctcagcagggtgtcagggaaccactggtccatgtagggttattccagtgtgagtccaca
ggtggctcccactgggtgctagagcagaccctcgtcctggatgcctccactcgcactggt
aacaacaacaataacatggagagtggcgtcaaggacctgaatgtggagaataataacctg
gacatctatctgcccaatgacgactgcctggggacctctggtaagagtctggtccacctg
gactgggtctccagggaggacggctcccacattcttactgtggggattggttccaaactc
tacatgtatggcctgctctctggcaaacctcctgaactgggcctgtctgagggccccagg
gagcagagctcttcccgcctggtcctcctgcgctccgtggacctggtctcctccgtggaa
ggctccctgcccatccccgtctccctgtcctgggtgagagacggcatcctggtggtgggc
atggactgtgagatgcacgtgtactcccagtggcagcccccggccctggcaaagtccacg
gccttgaacaccaccaccacagacatgggcagcgtgtcatctctcctggctgcaatgaaa
cagagccatgaggagggcctgaaccccgttcctcccaagaagagcttgaccaggtccatg
accagcctggcccagaagctgagtgggaagaggacagtgtacgacctgcctgcggagatg
gaggactatgggctgtttgaggcggcacaccacctgttccccaccctaccccagtaccac
ccggtacagctgctggagctcatggacctggggaaggtccggcgggctaaggccatcctc
tcccacctcgtcaaatgcattgccggggagattgtggccctcaaagacaacggcaccaac
caagacaagcgtctccgctcgcgcaccatcagcgccggcggcagcacctccagagacccc
aagctcttcagcaagggcgagagctcggactacacagagatcgactccatccctcccctg
cccctgtatgcgctgctggcggccgacgaggactgctcccccaagcccaaggataaggtg
accagcttgagtggagacagtggccacgggtccagtcagacggacgcctacgatgagctc
ttccagagcagcggggtgggtgtggacgacctggagcatatggacagcgaccaggaggac
ggctgtgctaaggtcatagacctgtctcaatatagccccaccttctttgggccagagcac
gcccaggttctgtccagccacctgcttcactccagcctgccgggcctgacccgcatggag
cagatgtccctcatggccctggctgacaccatcgccaccacaagcactgacatccgggag
agccagagcaggggtaaaggtggagagactttggatgagtgcggtctgaagttcctgttg
gctgtgaggctccatacgttcctgctgaccaccctgcctcctgcccatcgcgctcagctg
cttcgccaaggtctgtccacctgtcactacgcctgggccttccactcggaggctgaggac
gagctgctccacatgttacctgccttgcagaaaggagaccccacctggcccgagctccgc
gccatgggcttgggctggtggctcaggagcaccaataaactccggaggtgtatagaaaaa
gtcgcaaaagcgtcttttcaaaggcagaacgatcctctggacgccgccatcttctatctc
gctatgaaaaagaaagcggtggtctggggactgtacaggtctcagaagaatgctaaaatg
actacgttcttcagcaacaacttcagtgaggaaaggtggaggagggctgccttgaagaac
gccttctcgctgctggggaagcagcgcttccagcactctgcagccttctttcttttggca
ggctccctcaaggacgctgtggaggtttgcctggagaagatgcaggacctgcagctggcc
ctagtgatctcccggctctatgagtccgagtttgagacgtcctccacctacaaacgcatc
ctgcagaggcacgtgctgggccaagaccgccagctccccgcccaccaggaccccttcctg
cgtagcacggcttactgggtgctggaggactacagccgggccctggatactctgttggag
cagcctgctgccccaaacctagcgtcctctactcaggctggccacacaactcaaccaggt
agtacctcgtccacgtccctctgtagcccggaggtcttcaacttctacacctacctccgc
acacatcccttactgctgcgccgccattttggctcgtctgagaagaccagggtgggtctg
acagcggagggtcgcatggcaaactcaatcagcctggtggagaggaggctgttcttcacc
gcagcctacgctcacctgcaggccggctgccccatgctggccctggaggtcctctccaaa
atgcccaaagtcgtcaaaagatccaagctcccccaggacgataccaccaaccccgacctg
agcgagacgaaaaaggaacaggcgtcagatttggactggtctcagcccgcgttgaacggc
ttcgagtctgtgtcagacagcttgtccaatagccaatcagactctgtgctgagttttgac
tggggccagccctctgtgtcggttcaggatgaagccctggagttgaaatgggacagcgac
aaggaggaggaagaggacgacgacgacgaaccacagggcttggccatgaagagtgccgac
aacaccagtagcgtctttcaagatgccatctctccattcacggagacgctgctggacgag
ggtgacttcctcatgccctctgaggacatcctggccgctcaactcaaattcagcgcctgc
ctaaagatcctgaccacggagctgcggactctgtccacgggttacgagctggacgggggg
aagctccgctaccagctgtgccagtggctggagagggaggtggtggccctgcagaggtgc
tgcagctacaagccctgcctgccagagctggccctgggaatggcagggccgggtggagag
gaggaggcccaggcccaccctggtgaggctcagcgcacccgcagacactggctccagagc
aaccagcctctcctgcgcatgttcctcagctactgcagcttgcacggctcccacggagga
ggcctggcctcggtgcgcatggaactcatcctgctgcttcaggagtcccaacaggatgac
ggtgtccagtcagccgtcgccccctacctgcaccacgcctccattcctcttctgctggcc
tgcactgccagtgccaagacagttgtggccaaccccatcgtccatctgaccaacctcacc
cacgacatcctgcacaccatcaacgcactggactccccgccacacccagacgtcgtcaac
aacgagatctatgtgatgcacacactggcagcctcgctgtccgcctgcatataccagtgt
ctctgcgacggccataaccacagccatgtgaaccagttcactgggatagtgtaccagagt
atcctctccttccagcaccactcggtacgcactgtgagcatggaggagactgtactgccc
aacacccacccagcacagtggccaggtatcagtaccctgatccgcctgttgaactctgct
ggtgaggagagccagccaggcctggccgtgttactgtgtgagatcctgacggccgtcttc
ctcagcctgtttgtgcacggcctggccactcactccagcaacgagctgttccgcatcgtg
gcccacccgctcaacagcaagctgtgggtggctgtgttcggagggggggcgcgtaccccc
atcacagagaagccctgtaaggacaagtcacctccagcagccaatgaggagttcgatagg
aagcccaggcgcttcaagctgctgtcgtcgtcgccacgcagtgcctccagagaggggcca
gagacctccagcccaaccagccctgtggtggagcaagagacctccatcttcaaagagcac
tttgtccccccggagctcagcatctgggactactttatcgcaaagcctttcctccctccg
tcagagagcagggtggagtacgactcggaggagagccagggcagtcaggacgaggatgat
gatgatgatgacgagtttggagactttgaccccaactctcctagccgagaacattccaat
cccaactcctacagttggtgtctgatgcgtctggccatggtccagctggtcctaggcaac
ctgaagtcattctaccccatggcaggacacgacctactagatctacctgtgggctctcct
ctgtgtcacgcggtgctgaagaccctccagcgttgggagcaggtgttgctgaagaggctg
gagatcttcggggggccgccctccaagtacatctccacacaccctctggacgagacggct
gcctcgggccccgccatcctcagacacaaagccctgtttgagccctccatcacacccttc
aggtccagtcaccactctgccctgcctgtgaagaggctgtggcagtacctggtcaaacag
gaagaggtgcaggaaacgttcatccgcaatattttcaccaagaaacgaaaccaaaacgag
tcggttgaggacctcaatgaaaatgacaaatgttcagggatggaggagcctagctgtaac
cagagcgaggcagatctgggctaccccggaggcaaggcccggatcatccacaaggactcg
gacatcattacagccttcgccatcaacaaggctaatcggaactgcttagtcatggcctcc
actcatgacatccaggagctggacgtgtcctccatcttggccactcagattctgacgtgg
atcgatgacgatacggaggccgaggccaaaggtgatgacttcctggtgatccaggcccgg
gacgacttcaacaccctccacggcaccaccccctatacccacagcagcctagggacgccc
atcaacatgccatggctcgggggcctgcagacggggagaggcgctgccgtgctcatcaaa
aggaacatcaacaacgtgagaaggatgacctcccacccaaccttgccttactacttaaca
ggagcgcaggacggaagtgtccggatgtttgagtggggccactctcagcagatcatctgc
ttccgaagtccaggcaattccagagtcacacggatacgattcaaccaccaaggaaacaag
tttggtatcgttgacgctgacggagccctacgtctatggcagaccaatacgactgggaac
acccctaaaccctacctgacattgcagtgccataataagacggctcacgactttgtgttc
gtgggctcatcctccctcatagccacagcagggctgtcaacagacaacaggaatgtgtgt
ctttgggatacattggtgaatccaatgaacagtctagtgcacgcctttagttgtcatgag
tcgggggccacggtgctgtcgctggcccccaggcagcagctgctgattacaggtggcagg
aagggctggatcagcgtgctggagctcccccacaggcaccagcgccagagcttccaggcc
cacgactcccctgtcaaggccctggctgtggaccccaccgagggcagcttcatcagcggc
tctgccgagggcaacatcaaggtgtggagcctgtccacgcagtgcttactgcatcagttc
cccaacgagcacgctcgccagtccctgttccggaatctgggcacgggcgtgatgcagatc
gaggtgggcccggccaaccacatcttttcgtgtggcgccgacggtaccatgaagatgagg
attctccctgaccgcttcagcgtcaacaatggcaacctgaagaacgacgtcaagttcatc
atttag
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integrated database retrieval system
