Oncorhynchus keta (chum salmon): 118370880
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Entry
118370880 CDS
T09424
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118370880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118370880
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
118370880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
ADAMTS_CR_3
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
118370880
NCBI-ProteinID:
XP_035611989
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All DBs
Position
14:76543305..76602583
Genome browser
AA seq
1151 aa
AA seq
DB search
MRNLHLNPLKSLILAKEKALRYCSPQNLGDMRELCIWILRVSMLLLLLRPNPLDCQLTTD
HRKVPQRAEPQQQEAGGVQGGGPGSWGSWGPWSSCSRSCGGGVQEQNRPCLPSYNPSMGA
AAYPSRPGGHHPQHPNQNPGHVMSALRPTVPLHRTNPGRPPPSNSNTSLARRGELRDQQR
DREAHAGHRMGSDSPIIPGKYGYGRMPYVVSLQGDKGQTSGIETGAGRSHRQRRSPFSDP
SPSATRHGGHRPNPYRPPYNNPHLHSYSPVYYQPPASQPRSNPNPASPPRANPSPASQPR
SNTNPNSNPNPAPQPRDNPNSAPQHRSNPNPASQPRANSNPVPQPRSNPNPASQTRSNPN
PASQPRANPNPAPQPRATSNPSLAPQPRANSNPNPAPRPRSNPNSNPPWSSSLYQPSQGH
QPRQEQQHSSSQASADHQPFGLPYNPLPTSCVGEHNKYKICNTDACPPASRHIRAVQCSS
YNSYPFMGRLYEWEPFNEVSGDQRCELNCRAIGFRFYVRQSDRVIDGTPCGQNETSICVA
GRCQSLGCDEYLGSGKVMDKCGVCGGDNMACKLVSGLFQQHSLNKVGYHKIVEIPEGATK
INVTETVKSRNYLALKSRSGRSIINGNWAIDRPGKYEGVGTMFTYRRPNEVTSTAGESFL
AEGPTNEILDVYVIYQQPNPGVSYEFILPSDNPPQHPNHRPGGNTLYGQSGIDHRGNPNQ
EGYDPAGGGKYSPQVPNNQVPAVQPPKRQREYNWKLSGATECSASCGRGSRYTIFRCVHR
LSHEQVPGNQCDSSTRPSSQEEPCNLQSCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVY
ANRTLNVHTSRCRHLEQPETTSTCQLKICSEWQIRTEWSACSVPCGVGQRTREVHCVSNM
GDFVSNEECNMKLRPSDNENCDMGPCAKSWFFTDWGNKCSAECGMGIRTRGVLCLTNHIS
SLPLEGCGHERPTDSQVCNHGPCESRIEWFTAPWSQCSTECGSGSQQRAVVCLMKTDEGF
NVMPPYECSSLDKPLNQQSCHLKPCGAMWYHTDWSACSKTCEGGFRVREVRCLSDDMLSS
EGCEEELKPVEREECNPEPCVPHIDENCRDKYFNCNVVVQARLCVYDYYKTTCCASCTRV
AHRQSQHRALS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatcttcaccttaatccactcaaatctttgatactagcaaaggaaaaagctctc
aggtattgtagccctcaaaatctaggagatatgagggaactttgtatctggattctgaga
gtttccatgcttctgctgctgctcaggccaaatcccctggattgccagctcactacagac
cacaggaaggttcctcaaagggcagagccccagcagcaggaggctggaggagtgcagggt
gggggcccaggctcctggggctcctgggggccttggtcctcctgctcccgctcctgtggg
ggaggggttcaggaacagaaccgaccctgcctaccctcctacaacccctccatgggtgca
gctgcctacccctccaggccaggtggccaccacccccagcaccccaaccagaacccaggc
catgtaatgtctgccctaagacccactgtcccgctgcaccgcaccaatcctgggagaccc
ccaccctccaacagcaacaccagcttggcccgccgaggcgagctgagggaccagcagaga
gacagagaggcccatgctggacacaggatgggcagtgacagtcccatcattccagggaag
tatggctatgggaggatgccttatgttgtgtctctccagggagacaaaggccagacgtct
ggaatagagacaggggctggccgctcccacagacagagacgctccccgttctctgacccc
agcccatcagccaccaggcacggaggccacaggccaaacccctaccgtccgccctacaac
aacccccatctccacagctacagcccagtctattaccagcccccagcctcccaacctagg
tctaaccctaacccagcctcccctcccagggctaaccctagcccagcctcccagcccagg
tctaatactaaccctaactctaaccctaacccagccccccagcctagggataaccctaat
tcagccccccagcataggtctaaccctaacccagcctcccagcccagggctaactctaac
ccagtcccccaacccaggtctaaccctaacccagcctcccagaccaggtcaaaccctaac
ccagcctcccagcccagggctaaccctaacccagccccccagcccagggctacctctaac
cctagcctagcccctcagcccagggctaactctaaccctaacccagcccccaggcccagg
tctaaccctaattctaacccaccctggtcctcctcactctaccagcccagccaggggcac
caacctaggcaggagcagcagcactcatccagccaggcctcagcggatcatcaacccttt
ggactgccctacaaccccctgcccacctcctgtgtgggagagcacaacaagtacaagatt
tgcaacaccgatgcctgtcctccagccagtagacacatcagagcggtgcagtgttcttcc
tacaacagctatcccttcatgggtcgactgtacgagtgggagcctttcaatgaagtttca
ggggaccagcgttgtgagctcaactgtcgtgcgatcggtttccgcttctatgtgcgtcaa
tcggatagggtcatcgatgggacgccgtgcggccagaacgagacttccatctgtgtggca
gggaggtgtcagagtctgggctgcgatgagtacctgggctcaggcaaggtgatggacaag
tgtggggtgtgtggcggggacaacatggcctgtaagctggtgtcagggctcttccagcag
cacagcctgaacaaggtgggctaccacaagatagtggagatcccagagggagccaccaag
atcaatgtcaccgagacggtgaagagcaggaattacctggctctgaaaagccgctcaggt
cgctccatcatcaatgggaactgggccattgaccggccagggaagtatgagggggtgggc
accatgttcacctaccgacgacccaatgaggtcaccagcaccgccggggagtccttcctg
gctgaagggccaaccaatgagatcctggatgtttatgtgatctaccagcagcccaaccca
ggagtgagctatgaattcatccttccctctgacaaccctccacagcaccccaaccacaga
cctggagggaatactctgtatgggcaaagtgggattgaccaccggggcaaccccaaccag
gaggggtacgatccagcaggagggggcaagtactctccccaggtacccaacaaccaggtg
ccagcggtccagccacccaaacgtcagagagaatacaactggaaactgtctggggcaaca
gagtgtagtgcctcctgtggcagaggtagcaggtacaccatcttccgctgtgtccacaga
ctgagccatgagcaggtaccagggaaccagtgtgacagcagcaccaggcccagttcacag
gaggagccctgcaaccttcagtcctgccctgccttttgggacattggtgagtggtcggag
tgcagtaagacatgtggcctgggtatgcagcaccgccaggtcttgtgcaggcaggtgtat
gccaaccggacccttaacgtccacaccagccgctgccgccacctggagcagcccgagacc
accagcacctgccagctgaaaatctgcagcgagtggcagatacgaaccgagtggagcgcc
tgctctgttccctgtggcgtgggccagaggaccagggaggtgcactgtgtcagcaacatg
ggagactttgtgtcaaacgaggagtgcaacatgaagctgcgacccagtgacaatgagaac
tgtgacatggggccctgtgctaaaagttggttcttcactgattgggggaataagtgttct
gctgagtgtgggatgggcatccggacccgtggcgttctgtgcctgaccaatcacattagc
agcttgcctctggaggggtgtggccatgagcgccccactgactctcaggtctgtaatcac
ggcccctgtgagagtcgcatcgagtggtttacagccccctggagtcagtgttcaacggag
tgtggctcgggcagccagcagagggcagtggtgtgtctgatgaagactgacgaggggttc
aatgtaatgccgccctacgaatgttcttctctagacaagcctcttaatcagcagagctgc
cacctcaagccctgtggggccatgtggtaccacacagactggagcgcttgttctaagacg
tgtgaggggggcttccgtgtgagggaggtgcgctgtctgtctgatgacatgctttccagt
gagggctgtgaagaggagctgaaaccagtggagagagaagagtgcaacccagagccctgc
gtcccacacatagatgagaactgtcgagacaagtatttcaactgcaatgtggtggtccaa
gcacgtctctgtgtgtacgactactacaagacaacctgttgtgcctcctgcacacgagtg
gcccacagacagtcacaacacagggcactcagctag
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