Oncorhynchus keta (chum salmon): 118371001
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Entry
118371001 CDS
T09424
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04136
Autophagy - other
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118371001
04136 Autophagy - other
118371001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118371001
03029 Mitochondrial biogenesis [BR:
oke03029
]
118371001
Membrane trafficking [BR:
oke04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118371001
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118371001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
BCAS3_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
CPSF_A
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_HPS5
EIF3I
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
118371001
NCBI-ProteinID:
XP_052327839
LinkDB
All DBs
Position
2:11375632..11397044
Genome browser
AA seq
446 aa
AA seq
DB search
MEERETPDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
GDEAPQEAQQEEKESEDGRSLPPSTSPSYAATVSLPSTAPSSTTLTGYSEDGGAEKGDVI
PEHEFAEGPVCLDDENEFPPVIKQTN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggagacacccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacatctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacgccccacaac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcaaaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcttcaggaaccaaactc
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagatgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcggctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggacggaggagagtgtgttctggtcaggaaacacaggctatttgaa
ggagatgaggcgccacaggaagcacaacaggaagagaaggagtcagaggatggaaggtcc
ctcccaccgtcaaccagcccatcatacgctgccactgtgtccctcccctcgactgcaccc
tcttctaccactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatc
cctgaacatgagtttgcagagggacccgtctgtctggatgatgagaatgagtttcctccc
gtcatcaaacagaccaactga
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