Oncorhynchus keta (chum salmon): 118371023
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Entry
118371023 CDS
T09424
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118371023
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118371023
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
ig
fn3
LRR_14
Ig_2
LRR_EndoS
C2-set_3
Motif
Other DBs
NCBI-GeneID:
118371023
NCBI-ProteinID:
XP_035612209
LinkDB
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Position
3:25552943..25557616
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AA seq
659 aa
AA seq
DB search
MVQGFSLCFCLALLCLGRCVCGTCPFQCSCFFHKLSDGSKARSVLCNDPEITLIPPNFPT
DTSKLRIEKTAITRISSETFHYLNSLELLCISFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEAAIYIKNLTYLDLSSNSLVTVPPEVLFTWL
SVKPSQGDGESSKYILGLHDNPWLCDCRLYDVVQFQKSPTTSVTLIDTRLHCADPESLSG
VSFSETELRKCQEPRVHTAVARVRSSLGNNVLLCCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSTLSVRAVSYRDSGKYMCKATNFLGTADAIISLVITDSLKNEEQGGSSKT
RKQKGRKTGGFGKAAYQDKLVAKYIPPPTTMAATPIIEPLGPGGFTRQYDIESYDISNSV
VDGQAPGPPITETAMQEVEKEVLSNLAANASSLQAPAPPEKRVVRSVKIIGDTDHTVSLN
WRAPAAKNTTEFSVLYAVFGERDMRRINVAAGKNRIIIEGLVPRTKYIACVCVKGLIPKK
EQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDI
QESYVTFETLSPGQNPKGMEEECLARQQPDESNRLLSARCSVDSVAICRTEGPPNEYFC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaggttttagtctgtgtttctgcttggcattactttgcctcggacggtgtgta
tgcggcacgtgtccgtttcaatgtagctgtttctttcacaaactatccgacggatccaaa
gcaaggagtgtcctttgtaatgacccagagatcactctgatcccacccaactttcctaca
gacacctcgaaactgcggatcgagaagactgccatcacaaggatctccagcgaaaccttt
cactacctcaacagtttggaattgctctgcatttctttcaactctctgaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatcgctgactgatatgcccgacctgaggctactggacttgcat
aataataagatatcgtcgatcccggccgaggcggccatctatatcaagaacctgacctac
ctggacttatctagcaacagtctagtcacggttcctcctgaggttctctttacgtggttg
tctgtgaaaccatctcaaggagatggggaaagttccaaatatattctaggtctccatgac
aacccgtggctgtgcgactgccggctctatgacgtggtccagttccagaagtctccaacc
acatccgtgactctgatcgacaccaggctgcactgcgcggacccagagagcctgtcgggg
gtgtcgttcagcgagacggagctccggaagtgccaggagccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctgtgctgtgggacaatcggagtc
ccagtaccagagctgtcctggacccgggcagacggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccaccctgagtgttcgtgctgtctcttac
agggactctgggaaatacatgtgcaaagcgaccaacttcctggggactgcagatgccatc
atctccctggttatcacagactccttaaaaaatgaggaacaaggtggcagctccaagact
agaaaacaaaagggacggaaaaccggtggttttgggaaagctgcctaccaggataaactt
gttgcaaaatacatacctccaccaaccaccatggcagccacgcctatcatcgaaccacta
ggaccgggcggttttacacgacagtatgatatcgagagctacgatatctccaacagcgtg
gttgacggacaggcgcccggtcctcccatcacggagacggcgatgcaggaagtggagaag
gaggtccttagcaacctagcagccaacgcctcgtctttacaggcgccggcaccaccggag
aaacgggtggtgcgttcggtgaagataatcggggacaccgaccacaccgtctccctgaac
tggcgggccccggcggccaagaacaccaccgagttcagcgtcctgtacgccgtgttcggc
gagagggacatgcggaggatcaacgtcgctgcaggaaagaaccggatcattattgagggc
cttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaaaag
gagcagtgtgtaatcttctcaacggacgaggcggccagcgcaagcggcacccagaagctc
attaacgtggtggtgatcaccgtggcctgcgtgatcgctgtcccgctgacactgatcgtc
tgctgcggggcgctcaagaagcgctgcaaaaaactactggggagaaaatccaaagatatc
caagaatcatatgtgacattcgagaccctatccccgggacagaaccccaaggggatggag
gaggagtgccttgccaggcaacagccagacgagtccaacagactgctctctgctaggtgc
agtgtggactccgtggccatttgtaggactgagggaccgcctaacgaatacttttgttga
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