Oncorhynchus keta (chum salmon): 118371027
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Entry
118371027 CDS
T09424
Name
(RefSeq) cadherin-related family member 1-like
KO
K16501
cadherin-related family member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118371027
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Cadherin related
118371027
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
118371027
NCBI-ProteinID:
XP_052333392
LinkDB
All DBs
Position
24:6389608..6457417
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AA seq
1071 aa
AA seq
DB search
MHLCFQIEDAFDLSPYTEGIFNCDSTGPINLDHKETIIRRQLDKLYGERKSPQESYGERK
SPQEPYEERKSPQEPYEERRSPQESYEEIKSPQEPYEERKSPQEPYEEIKSPQEPYEERK
SPQEPYEEIKSPQEPYEEIMSPQEPYEERKSPQEPYEERKSPQEPYEERKSPQEPYEEIK
SPQEPYEERKSPQESYDTYGLLWQTDYAPYFHDNGPSSTNGNMALFSISEDTEVGTQLYI
LNGTDPEGDAVWFGLTFEKGTREYLRVDPKSGNITLIQELDREKQGEILASVSITDGRNK
VVETIRVFVTDANDEQPEFQNLPFTVDVPEDTAAGSSIYRVQAVDKDMGSGGSVNYYLLG
TTTTRFTMDGHSGVLRIKPGETLDYETTATHFVIVVAKDGGGQYKGKHQVLTSTATITIN
VLDAQDTPPAFVGTPYFGYVYEVSLPGSEISTVFAKDGDEGNPNPIHYSITNGSEGVFTI
NSTSGCISLTAYPVTLRKELYEIQVKATELGPSEELLDYYTMTVVTVRVVDLNNHPPTFY
GENGPQSQFEVTMYEHPPEGEILRGLKITVNDSDQGANAKFKLRLVGPGRVLRVVPQTVL
NEAQVTVIVEDSAGIDYEKGKSLTYKLLAVEIDTPERFSATADIVIHLLDTNDNTPRFTS
EYYIARIPENSPGGSNVVSVTANDPDSGLWGEVKYSIYGSRYDLFLIHPSSGVIYTQAWA
ILDAEVKSKYNFYVKAEDTEGKYSLAEVFVTVLDINDHVPEFDDSLVEMTMVIGAPVKVK
AIDGDAGSPNNIIEYSIMQAEPDNIFDINAETGEINLKSYIKSMEIVQNITKQKDCRWSL
VVQARDRGSPSFSTTAVVNIDITEATQVNGPMADFLLQSRDNPMKALGMVAGVISILVGI
TVLISTATFLRNTKSNRIMPARRIVIRRRPPRDRKPWTFNVPFRGSGNDSANKFVVGDQE
AGSVNVNLNNKDGSRCSRSKPKPTPPRAPCLPPPSCPPPSSNPRPSERPRHWAAVPTVSG
GLTSTGSRRSSQSREINISSDTSRIPVSSALVSELKMRLEQKIIESNSSYY
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtgctttcagatcgaagatgccttcgacctgtcaccctacactgaaggaatc
ttcaactgtgacagcacaggccccatcaacttggatcacaaggagaccataataaggaga
cagctcgataaattatatggggagagaaagtcaccccaggagtcatatggggagagaaag
tcacctcaggagccatatgaggagagaaagtcaccccaggagccatatgaggagagaagg
tcaccccaggagtcatatgaggagataaagtcacctcaggagccatatgaggagagaaag
tcaccccaggagccatatgaggagataaaatcacctcaggagccatatgaggagagaaag
tcacctcaggagccatatgaggagataaagtcacctcaggagccatatgaggagataatg
tcacctcaggagccatatgaggagagaaagtcacctcaggagccatatgaggagagaaag
tcacctcaggagccatatgaggagagaaagtcacctcaggagccatatgaggagataaag
tcacctcaggagccatatgaggagagaaagtcacctcaggagtcatatgacacctatgga
ctcctctggcaaactgactacgctccctatttccatgacaacggaccgagcagcaccaat
gggaatatggctctgttcagtatctcagaagacacagaagtcggaacacagctatatatc
ctaaacggtaccgacccagagggggatgccgtgtggtttggcctgacctttgagaagggc
accagagaatacctgagagtggaccctaagtcaggaaacataactctcattcaggaacta
gacagagagaaacaaggtgaaatcttggcttctgttagcataacagatggtcggaataag
gttgtcgagacgatacgggtgtttgtcaccgacgccaacgatgagcaaccagagttccag
aacctgcctttcaccgtcgacgtccccgaggacaccgcagctggaagcagcatttacaga
gtacaagcggtggataaagacatgggctctggaggcagtgtcaactactacttactgggc
accactactaccaggttcaccatggacggccacagtggggtcctgcggatcaaaccaggc
gagacactcgactacgagaccacagcaacacactttgtgatagtggttgccaaggatggg
ggcgggcagtacaaagggaagcatcaggtgctgacatctacagccaccataaccatcaac
gtcctcgacgcccaagacactcctccagccttcgttggaactccttacttcggctacgtc
tacgaggtctcacttcctggttctgaaatatccactgtgtttgccaaagatggagatgaa
ggaaaccctaatcctattcattactctattaccaatggcagtgagggtgtcttcaccatc
aacagcacaagtggttgtatcagcctaacagcttatccagtcacgctgaggaaggaatta
tatgaaatccaagtcaaagccactgagctggggccgagtgaggagctgttggactactat
accatgactgtggtgacggttcgagtggtggacctcaacaaccaccctcctaccttctac
ggagagaacgggccccagagccagtttgaggtgaccatgtatgagcaccctccagagggg
gagatcctcagggggctgaagataacggtcaacgactctgatcagggtgcgaacgctaaa
tttaaactgaggttggtggggcctggtcgtgtactcagagtggtgccccagacggtcctc
aatgaagcacaggtcaccgtcatcgttgaagactctgctggcatcgattacgaaaaaggc
aaatccttaacatacaagttgctagcggtggagattgacacccctgagaggttcagtgcg
acagctgatattgtgattcatcttttggacaccaatgacaacacccccaggttcacctcg
gagtattacatcgcacgtatcccggaaaactcccccggaggctccaacgtagtgtctgtc
accgccaatgatccagactctggcctttggggtgaagtcaagtactccatctatggatcc
agatatgatctgtttctcatccatccgtcttcaggcgtcatatacacccaggcctgggcc
attctggatgctgaggtcaagtccaagtacaacttctacgtgaaggcagaggacacagag
ggaaagtacagcctggcggaggtgtttgtcactgtcctggacatcaacgaccacgttcca
gagttcgatgacagccttgtggagatgaccatggtcattggtgcacctgttaaagtaaag
gcaatagatggcgatgcagggtcgcccaataacatcattgagtattccatcatgcaagct
gagccggacaacatcttcgacatcaacgcagagactggagagatcaacctgaagtcgtac
atcaagtccatggagatcgtgcagaacatcaccaagcagaaggactgcaggtggtctctg
gtggtccaagcccgggaccgagggtctccatccttcagcactaccgccgtggtcaacatc
gacatcactgaggcgactcaagtcaatgggcctatggcagactttttattgcaaagtagg
gacaacccaatgaaggcccttggcatggtcgctggtgtcatcagcatattggtagggatc
actgtcttgatctccacggctacgttcttgcgcaacaccaagtccaacaggataatgccg
gcacgtcgcatcgtcatcagacggagaccgccaagggaccgcaagccgtggacttttaac
gtaccgttccgtggtagcggaaatgactcggcaaacaagttcgttgtaggcgaccaggaa
gcagggagtgtcaacgtaaacctcaacaacaaagacggctcccggtgttccaggtcaaaa
cccaagcctacgccccctagagctccctgcctgccccctccatcatgccctcctccgtcc
tccaaccccaggcccagtgagaggccccggcactgggcagcagtgcccaccgtctctggg
ggcctgacctccactggttccaggagatccagccagagcagggaaatcaacatcagctct
gacacttctaggatcccagtcagctcagccctggtctctgaactcaaaatgagactagag
cagaaaatcattgagagcaactcaagctattattaa
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