Oncorhynchus keta (chum salmon): 118371060
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Entry
118371060 CDS
T09424
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118371060 (rhbdl1)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
118371060 (rhbdl1)
Peptidases and inhibitors [BR:
oke01002
]
Serine peptidases
Family S54: Rhomboid family
118371060 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
118371060
NCBI-ProteinID:
XP_052344683
EnsemblRapid:
ENSOKEG00005031678
LinkDB
All DBs
Position
3:10731506..10779289
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AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEDGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNSLCPPPVFMAIITIIQIVVFMCYGIMLNKWVLQTYQPDFMKSSLVYHPRHRLQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLAGAVVGISMGLLILRSYEESLQKQCSWWVILFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctctctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcattgcagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgtttgcactggtgcagagcaacgaggatggacaggtgtgctac
caggagctcatcgagctgatgagcagcaagcgttccagcagtttccgacgagccatcgcc
aatggccgccgcacactgcagcgggagatcctattggacgagacgggcctgggcgtgtac
aagcgctttgtgcgctacgtggcctatgagatcctgccctgcgagacagaccggcgctgg
tacttccaccagaacagcttgtgtccccctcctgtcttcatggccatcattaccatcatc
cagatcgttgtgttcatgtgctatggcatcatgctgaataagtgggtactgcagacatac
cagccagacttcatgaagagctccctggtgtaccaccccagacaccgcctccaggtgtgg
cgcttcttcagctacatgttcatgcacgttgggttggaacagctggggttcaacgctctt
ctccagctgatgatcggtgttcccttggagatggtccatggcatcctacgcatcagtctg
ctctacatggctggtgtagtggcaggttccctgactgtgtccatcacagacatgcgtgct
ccagtggtggggggctccgggggtgtctacgctctgtgctcggcgcatctggccaacgtc
gtcatgaactgggccggtatgcggtgtccatacaagctcctccgcatgattctggcactg
gtgtgcatgagttcggaggtgggccgtgctgtgtggctgcgcttctccccgcccttgccc
tcctcggggccccagcccagcttcatggcccacctggcgggagcggtggtgggcatcagc
atgggcctgctcatcctgcgcagctacgaggagagcctgcagaagcagtgctcctggtgg
gtcatcctcttctccttcatcaccttccttctcttcgccatcttctggaacatcttcgcc
tacgagctgctgggggtgcagcttccacccgctccctga
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