Oncorhynchus keta (chum salmon): 118371062
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Entry
118371062 CDS
T09424
Symbol
mef2ca
Name
(RefSeq) myocyte enhancer factor 2ca isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118371062 (mef2ca)
04371 Apelin signaling pathway
118371062 (mef2ca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118371062 (mef2ca)
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
118371062 (mef2ca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
118371062
NCBI-ProteinID:
XP_052377316
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Position
6:34645640..34678777
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AA seq
478 aa
AA seq
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MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGFDSPDIEADDSAGQSPESEDKYRKI
NDDIDLMISRQRLCQALPPSNYDMIGSIQGQNNSGLLYSQPGAGGSLGNHNLPPLSHTHP
GLQRNSMSPGPQHTHRTPSAGNAGGMMVSELSNAVSNTGNGSYGNHRHSPGLLSPGCVAK
GMQAKTPPLMTSMTLSGNRKPDLRTLLPPGNKNNMPSVNQRINHSQSAQSLATPVVSIAT
PTLPGQGMGGYPSALSTSYGTEYSLGDLSSLSGFGGNGSGSVHLGSVTGWQQQQLQNMQH
SALGHMGNLCQNSNLNLQNVHQNLHIKSEPASPPRDRGIGFVSGGMGAVSQGYLTNQGPA
EAGRSPGDSLSSCGSSYDGSDREDHRGNDNFLLRPMSNQEERHSPSVKRMRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatagcacggattatggatgaacgcaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcgtacgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagcctcacgagagcaggacc
aactctgacatcgtggagactctgcgaaagaagggtctaaatggctttgacagtcccgac
atcgaggcagacgactctgctggtcagagccccgagtcagaggataaataccgcaagatc
aacgacgacatcgacctcatgatcagcagacagagactctgtcaggctctccccccctct
aactacgacatgattggctccatccagggccaaaataacagcggactactctactctcaa
cctggggcggggggttccttaggaaaccacaatctgccgcccctctcgcacacacacccc
gggctgcagaggaacagcatgtcgcctggaccccaacacacacaccgaacccccagcgct
ggaaacgcaggagggatgatggtctcggagctgtcgaacgccgtctctaacactggtaat
ggtagctatggtaaccaccgtcactctccggggctgctgtctccgggatgtgtggccaaa
ggcatgcaggccaagactccgcccctgatgacctccatgaccctgagtggtaaccgcaag
ccagacctccgcacgctgctgccccctggcaacaaaaacaacatgccctcagtcaaccag
agaataaaccactcccagtctgcccagtctttggctactcctgtggtctccatagcaaca
cctactctgcccgggcagggtatgggagggtacccctctgccctctccacctcctatggc
acagagtactctctgggtgacctgagctctctgtcaggcttcggagggaacggctctgga
tcagttcacctgggatcagtaacaggctggcagcaacaacagctacagaacatgcagcac
tcagcattaggacacatgggaaacctttgtcagaactccaacctcaacctccagaatgtc
catcagaaccttcacatcaagtcagagcccgcctccccgcccagagatcgaggcatcgga
tttgtcagcggagggatgggggccgtgtcccagggctacctaacaaatcaaggcccagcc
gaggcagggcggtctcctggcgacagcctatccagctgtgggagctcgtacgacggcagc
gaccgcgaggatcaccgcggaaatgacaacttcctgctgcgcccgatgtccaatcaggag
gaacgccacagcccgtccgtcaaacgcatgcgcctatcagaaggctgggctacatga
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