Oncorhynchus keta (chum salmon): 118371356
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Entry
118371356 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118371356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118371356
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118371356
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118371356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
118371356
NCBI-ProteinID:
XP_035612669
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPKSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSSGTVVVVHDGERRVVVFGPQGRRLHGFGRRGRG
HGEVCHPVDVAVTPSGYVVVTDAGDAAVKVFTTRGSYVLAVWDSFQMPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQRPKAVACCRVTGNIALVETLGLTTQPPN
GPRPTRLTVFNKDFNVLSQIDSFTLSLGASVWPCMSAVAFDRDGDVIVIDSQHGLIWSLG
KLQNGPVLTPLVSGDLVRPVGLVATAQNTLIVLDSGDHAVKMYSVHSDAILVQK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctcctgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcaagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaaatcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggcctgggc
tctggagctctgcggcttcgctcagccttcgggggctgggggtccctgatcaaccccacg
ggggtggccgtgttcgggtcctctgggaccgtggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggttcgggcggaggggtcgcggc
cacggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgctggtgacgctgcagtgaaagtgttcaccaccagggggagttatgttctggcg
gtgtgggactccttccagatgccctggggggtggacgtggacagctgtggacatatcctg
gtcactgacatccaggccggaacgctctcccaggtcgtggtggactttgcccgtggcgtg
actctgatgaaccgagcggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgaccgggaacatcgccctggtggagacactgggtctcaccacacaacctccaaat
ggcccccggcctaccagactgacagtattcaacaaagactttaacgtgctctctcagata
gacagctttactctgagcctgggggcctccgtgtggccctgcatgtctgctgtggccttt
gacagggacggggatgtgatcgtgatagactcccagcatgggttgatttggagtttggga
aagctccagaacggcccggtcctaacccccctggtcagtggagacttggttcgcccggtg
gggctggtcgccacagctcagaacacgctgattgttttagacagtggagaccatgcagtg
aagatgtattcagttcactcggatgctattctagtccaaaaatga
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