Oncorhynchus keta (chum salmon): 118371372
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Entry
118371372 CDS
T09424
Name
(RefSeq) homeobox-containing protein 1-like
KO
K24885
homeobox-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118371372
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118371372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
118371372
NCBI-ProteinID:
XP_052328838
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All DBs
Position
20:complement(40407933..40438568)
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AA seq
527 aa
AA seq
DB search
MNNFLVISFRGSVVGVRGQKLEPTPWLAIRFFSAAASRDNVTLHGSPSLAPRKPLRGLIG
PRRARFSDRQLPQQRELHRAMRQWCLPAAVPRPEPMPTGRLSPPLSDVRMECCEVEPRYT
IEQIDLLQRLRLSGMTKPQIIQALESLERLDPDHRPPYCNESHAANPTTNTTPTTASAPA
PSSSSSSSSSSLSLASATTQTPGLDGASLSPSNSYEASPPPLYPHGVGVQKSFSYDIMAE
EDWDLEEKVEEYMRRDSNLVKEEIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEM
SDSKRRAFYRWYLLERNNPGATLSMRSLVKEEPDWRTGVSPGERGGVAGGPLRLRRGSRF
TWRKECQSIMESFFMENQYPDEAKREEIANACNSVIQKPGCKLSEFERVTALKVYNWFAN
RRKEMKRRANIEAAILESHGIEVPSPSCQSNGEELEPQDFTEQVNQRFIEQVNQRFIEQE
EISSGKDLDLQDTSSLAAVEVLPPPSPTSQVLEQKADESKRETVDEE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttcctagttatatcattccggggcagtgtggttggggttagaggtcagaaa
ttggaaccgactccctggttagcgattcggtttttctccgctgcagcatcccgggacaat
gtgaccctgcacggatcaccttcattagctcctcggaaaccattacgaggtttgatcggt
ccacgacgtgcacggtttagtgaccgtcagctgccacagcagcgggagctccatcgagcc
atgcgacagtggtgcctcccggctgcggtaccgcgacccgaaccgatgcccacagggcgc
ctctcacccccgctatcagatgtgaggatggagtgttgtgaggtggagccacgctatacc
atcgagcagatcgacctacttcagcgtctccgtctctcagggatgaccaagccacagatc
atccaggccttggagtccctagagcggctagatcccgaccatcggcccccgtactgtaac
gaatcccacgccgccaaccccacaaccaacactacccctaccacagcctccgccccagcc
ccctcctcctcttcctcctcctcttcttcctctctctccttggcatccgccacaacgcag
acccctgggctagacggcgcctcactgtcgcctagcaacagctatgaggcctctccccca
ccactgtacccacatggggttggagttcagaagtcgtttagctatgacatcatggcagag
gaggactgggatctggaggagaaggtggaggagtacatgaggagggacagtaacctggtg
aaggaggagattaaaaccttcctcaacaaccgcaggatctcccaggccatcgtaggacag
gtgacaggtatcagtcagagctatatctctcagtggttgctgcagcagggcttggagatg
agtgactccaaacgcagagccttctaccgctggtacctgcttgagagaaacaacccaggt
gctaccctgtcaatgcgctccctggtgaaggaggagcctgattggaggacgggggtcagc
cctggggagaggggcggggtggcgggcggtcctctgaggctgcggaggggaagcaggttc
acctggaggaaggagtgccagtcaatcatggagagtttcttcatggagaaccagtaccct
gatgaagcgaagagagaggagatcgctaacgcctgcaactcagtcatccagaaacctgga
tgcaagctgtccgagtttgagcgtgtcacggctctgaaagtgtacaactggttcgccaac
cgcaggaaggagatgaagagacgggctaatatagaggcagccatcttggagagtcatggt
atcgaggttccaagcccgagctgtcaatccaacggggaggagttggaaccacaggacttc
acagagcaagtgaatcaacgattcatagagcaggtgaatcaacgattcatagagcaggaa
gagatatcttccgggaaggaccttgatctacaagacacctcctcattggctgccgtcgag
gtccttccccctccaagccccacctctcaggttctggaacagaaagctgacgaatcgaag
agagagacagtggacgaggagtga
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