Oncorhynchus keta (chum salmon): 118371387
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Entry
118371387 CDS
T09424
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118371387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118371387
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
118371387
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
118371387
NCBI-ProteinID:
XP_052330810
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Position
2:28203178..28518460
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AA seq
1209 aa
AA seq
DB search
MLAEPDATVLHGSGNSMMSRNIYHNKNQDSSISISKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNTKKKEAQKVNNPANSQAADGTPKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVSGWAGG
DPWENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVP
EIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHN
ISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASN
IMRVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLA
QGLSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVK
LKLLLIAIENKSELGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACH
DDITDPKRIKKCGCKRLEDEHPSTLSPKKKQRNGGMRNSPNNSPKMMRHDPLLIPGNEQM
ENMDMNVKQYDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRN
LVMPLRASNFHYHELKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINL
CDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSP
DSSPVHGLVRQASVTTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFA
VSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCR
VAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLATPSQCTKRYVITN
PPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSIPTTNRQNRSS
KAREAGHKQNATRMNRMSQERKWFTDEPENAYPRNIQIKPMSTHMANQINQYKSTSSLIP
PIREVEDEC
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgagccggatgccaccgttctccatggaagcggcaactctatgatgagtaga
aatatctatcataataaaaatcaggactcctcgatctctatatccaaaatggacgtgatc
atccccttctcgccagacgtgccctgcgacaataatggccaacgcatgtggtgggcattc
ctcgcctcctctatggtgacgtttttcgggggtctcttcatcattctcctttggaggacc
cttaaatacctgtggaccgtgtgctgccactgcaacaccaaaaagaaggaggcccagaag
gtgaataaccctgctaacagtcaggcagcagatgggacacctaagggtcctgatgagaag
gacgaagtggtacctgccagcgaggttgggtggatgacctctgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggtcgtgctcgtctttgctctc
agcattggagcacttggaatatactttatagactcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttgggctgcggttcatagctgccaatgataagctgtggttctggctggaggtcaac
tcagtggtggacttcttcactgttcctcctgtcttcgtatcggtctacttgaataggagc
tggctgggcttaagattcctgagagccttgagattgatacagttctcagaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtaagtggctgggcggggggg
gatccttgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttg
ctcatggtcactatgtcaacagtgggctacggggatgtctatgcaaaaaccaccctggga
cgcctgttcatggtcttcttcatccttgggggtttggccatgtttgccagctacgtccct
gaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaat
gggagaaagcacattgtggtctgtggtcatataacgctcgaaagtgtctccaacttcctc
aaagacttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataat
atttcccctaatcttgagctggaagccttgttcaaacgccactttacccaagtggagttc
taccagggatctgttctcaaccctcacgatctggcccgagtgaagattgagtcagcagac
gcctgtctgattctggctaataaatactgtccagatcccgatgctgaagatgcctccaac
atcatgagggtcatctctatcaagaactattcccctaagatacgaattatcactcaaatg
ttacaataccataacaaggctcacctgctcaacattcctagctggaactggaaggagggg
gatgatgcgatctgtctagcagagctgaaggctggcttcatagctcagagctgtctagcc
cagggcctctccaccatgcttgccaatctcttctccatgaggtctttcatcgagattgaa
gaggatacgtggcagaagtactatttagaaggggtagctaatgagatgtacacagagtat
ctgtccagtgcctttgtggggctctccttcccagcagtctgtgagctgtgctacgtgaag
ctgaagctgttgcttatcgccatcgagaacaagtcggagctgggagagagcagaagccga
aagcgcatcctcatcaacccggggaaccacgtaaagatgcaggaaggaactctggggttc
ttcatcgccagcgacgccaaagaagtaaagagagcatttttctactgcaaagcttgtcac
gacgacatcacagaccccaaacggatcaaaaagtgtggctgcaaacgacttgaagatgag
cacccgtcaactctgtcacccaagaaaaagcagcggaacggaggtatgcgaaactcaccc
aacaactcgcccaaaatgatgaggcatgaccctctactaatccctgggaacgagcagatg
gagaacatggacatgaatgtgaagcagtacgactccacgggaatgttccactggtgccca
tcgaaagagattgagaaggtcatcctgacccggagtgaggcatccatgacggtgttgagc
ggccatgtagtggtctgtatatttggagatgtcacgtccgctctagtggggctgcgaaac
ttggtgatgcctttgagagccagcaacttccattatcacgagctgaagcccatagtgttt
gtgggctcgctggagtacctgaggagagaatgggaaactctccacaacttccccaaggtc
tccatactacctggtacgccattaagtcgtgcagatttaagggctgtcaacatcaacctc
tgcgacatgtgcgtgatactgtcggccaatcagaacaatatcgacgacgcttcgctgcag
gataaggaatgcattctggcgtcgctcaacatcaagtctatgcagtttgacgacagcatc
gggctcttgcaggctaactcccaaggtttcacgcctcctggaatggaccggtcctctcca
gacagcagtccagtacatggtttagtacgccaggcctccgtcaccaccggcgccaacatc
cccatcatcactgaactagtgaacgactccaacgttcagttcctggaccaagatgatgat
gatgacccggacacagagctgtacctgacgcagcccttcgcctgcggaaccgccttcgct
gtcagcgtgctggactctctcatgagtgcaacatacttcaacgataatatcctcaccctg
atccggacgctggtgactgggggagccaccccggagctagaggctctattggccgaagag
aacgccctgcgagggggctacagcacgccacagacactggccaaccgagacaggtgtcgt
gtagcccagctagccctctatgacgggccctttgccgacttgggggatggcggttgctat
ggagatttgttttgtaaagcgttgaagacgtacaacatgttgtgcttcggaatatacaga
ttgagagatgctcacctcgccacgcctagccagtgtaccaaacggtatgtgatcaccaac
cctccgtatgagtttgagctggtccccacagacctgatcttctgcctgatgcagtttgac
cacaacgcgggtcagtcccgggccagcctctcccacagctctcactcctcccattcctcc
agcaaaaagagctcgtccgtccactccatccccaccaccaaccggcagaaccgcagcagc
aaggcccgggaggccggccacaaacagaatgcaacaaggatgaatagaatgagccaagaa
aggaaatggtttacagatgaaccagaaaatgcctacccacggaacattcagatcaagccc
atgagcactcacatggccaaccaaatcaaccaatacaaatccactagcagtctgattcca
ccaatcagagaagttgaagatgaatgctga
DBGET
integrated database retrieval system
