Oncorhynchus keta (chum salmon): 118371398
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Entry
118371398 CDS
T09424
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118371398
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118371398
09142 Cell motility
04820 Cytoskeleton in muscle cells
118371398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
118371398
NCBI-ProteinID:
XP_052339750
EnsemblRapid:
ENSOKEG00005012329
LinkDB
All DBs
Position
28:71952825..72037174
Genome browser
AA seq
2931 aa
AA seq
DB search
MRLLCCAIVLLSASSAECQQRGLFPAIFNLASNAEITTNATCGEPEPEMYCKLVEHVPGR
RIRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHWVTLTLDLHQIFQV
AYVIIKAANSPRPGNWVLERSMDGVDYTPWQYYAISDTECLTRYNITPRLGPPTYKRDDE
VICTSYYSRLVPLEHGEIHTSLINGRPSADQLTSELLDFTSARYIRLRLQRIRTLNADLM
TLSYHDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKKLQCVCEHNTCGE
SCNECCPGYHQEPWQPGTLSDGNTCEKCNCHDKANDCYFNQTVANRKMSMNSHGDFHGGG
VCISCTQNTAGVNCEACADGFYRPNQVSPHNDNPCVECSCDMKGSLTPACIRDDNHAKPE
NGLNPGQCLCMEGFAGERCDRCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGA
DCDLCKQGFFNLEGSDPEGCTECFCFGVSDVCESSPWSMSQTVHSNGWLLTSESVSVYTA
PLIDEDNNLIIPNITMIQSYRFVSTWAAPESFLGKRLTSYGGFLSYSVAYDVSVDNVDRS
LPSQFDLIIEGNGRTLRQMPPRQLLLTPLNEQHVSVQLLPQGFVDLHTGQRVDRDELMTA
LADVAGLRIRGHLNASAEGELRLSTVSLDMVDINSTNTVQARDVEQCECPLGYSGTSCES
CSSGFYRLGGILFGGNCLQCECNNHATECDINRVCLDCTHNTTGPHCDQCLHGYYGNPSE
GTPEDCQRCACPLTVATNNFSPTCLLEGPGQVTCDRCQQGYTGTKCERCANGYHGDPTVA
DQECVVCECNGNVDPWEPGHCDTSSGVCLKCHSHTSGDQCERCEDGYYGDAITAKNCQAC
GCHDKGSYSGVCDLLTGQCTCKPNVVGEKCDRCQVGFHGLLSGQGCRECDCIQSGSVSVA
CEEDGRCQCIPGVAGDKCDRCHHSYFNYQGSGCTQCECAHTHGNCNVTTGECICPPHTRG
EKCDLCEEGHWGHDTVTGCKSCNCSEMGSYATECGNTNGQCQCRSDFAGQNCDRCAMGYR
GYPECTGCNCNINGTREEFCDEALGVCSCEAPGNCVCKDNVGGGGCDECKKGTLGLSVSN
PAGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLLVVSQSDLQGSVVGVYYQNPDMLL
DTRDIETPSLAGPYYWRLPKHYQGNKLLSYGGKLSYVVAFYAMDGAGLANYEPQVLMRGG
HLGKQVIYIDMPAPENGVTTRQDVPLTEHKWKYFNSVSEKAVSHSDFMAVLSHIEYITIK
ASYGTGLQQSRISNITMDTALEAEQGLEDMELASLIEICECPAGYAGLSCQECAPGYYRQ
PVTELNKRGKRPLIQPCVPCRCNNHSQACDLDTGECLGCQHNTAGEHCSVCSSGYYGDVK
GSVRDCSLCACPLKENSFSPTCTLEGVVGDFRCNACKPGYEGRYCERCSVGYYGNPSGPG
GRCEACQCSTAGSLHPACDSLTGQCECKAGVRGHLCDQCEARHVLDGYQCVLCDDECTRV
LLDDLDAVECSFLSVNLTGVILSPYSTLVNLENDTQEVKTLMSSYRSPDYHLTRDEEDMT
NLTQDIDGLLQKAMGVSADGEEVARSTENSVTQGAELLEYINTIQTAIQALAEQAGRLNR
TDNVEMNEAKSRRLMKQVAAMLETIRVVDLAQANASVSTELWAAEALLQRVQKHLQEPQG
VIESQTLNISSSLTQHQQQLVDAQALLNTARENNNHTHTLLGSINTNLPQYQGLRQNVGR
LNQTAETQLEETQDILADAVNLAEDMSNGTSQLEGAKEQLEQWNPMLRKHVDALVMELRK
QEALELVYKAEDHAQDLSKKAQALQSSLAEVMNTTLKATSAAHANSNIRVNIQPAEQMAN
RAILTAAMALNMTAQQEVSLTDLGSEAVQSSAKILAECLALNNSTGGLLANISDVTDRMA
LLISNLHNTSRRIPEPAFLLHSRPNGSSEQVLEAKEQAAMANSSLQRALEHLEELRVRLE
ESSKAVAQAKTSISNTNQLFSDSHSTARTAESKLNEAESRTERLYDRLKPLKTLRENLSR
NLSEIREMINQARKQAASIKVSVLADKDCVRAYKPEMSSSNFNTLTMTVKTSEPDNLLFY
MGSSSSVDFMAVEMHRGKVGFLWDVGSGHAKLEYPDIQINNNKWHRINATRFGRHGTLSV
HQLESDPLPAVKTTSPRSATVLDVNKFTLIFVGGLGLQIKKSSAVKMTQFKGCMGEASLN
EKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVLLFKTLSP
NGLLLYLASNATRDFLSIELVEGQVHLTFELGSGPLTLSSNKAYNTGSWYKITLQRNKRK
AYISVMAADNSSDKEIIEAESPGSASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGCI
KNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSMSLGSQGELLASFSTRN
HTGIILAGFSKAGTRKRRQARQPILAVMLVSGHLEVHVNIVEGGGVHKVVVKSRSGSFSD
GQEHSVILQRNRKTMTVLVDEDHQETVRLSSEKASLTFSSLYMGGLPPEEGAGLLRTTSS
FYGCIRNLALDAKLLDLSAAVKYHNVDMDSCLLEERPKRVLLPDDTDLEAEPTLDPSRPH
PPPPTQLSALTPGMLTCASMDNSTSLPEANQFGISRHSHKVLNINANTVRRSFSLGLSVR
TFAQSGLIYYMAHANQMDYATLQLLGGRLFFTCDKGSGPATASFPVPVNDGQWHTVKTDF
NKKSVVISVDSQASAPVLAKGNTLDVENKLYLGGLPHTYTAKKIGNVTHSLAGCIQKVIL
NSVELDTQSPVSEHLTAHCFTAAQDGTFFSGSGYAALMKEGYKVGSEVTLV
NT seq
8796 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttatgctgtgcaattgtgctgctatctgcatcctccgcggagtgccagcaa
agaggtctcttccccgccatcttcaacctggccagtaatgcagagatcaccaccaacgcc
acctgtggagagcctgagccagagatgtactgtaaactggtggaacacgtaccaggacga
cgcatccgcaactcccagtgtcggacctgtaatgcccagagtcaaaaccccaaagagcaa
catccaatcaccaacgccatcgacggcaccaacgggtggtggcaaagccccagcattaaa
aatggcagacagttccactgggtgaccctcacactagatttacaccagattttccaggtg
gcctacgtcatcatcaaggcagccaactctcctcgtcccggtaactgggtgctggagcgt
tcaatggatggtgtggattacacaccctggcagtactacgccatcagcgacacagaatgt
ctgacccgctacaacatcaccccccgcctcggaccccccacctacaaacgagacgacgag
gtcatctgtacatcttactactcgcggctcgtacccctggagcacggagagatccacacg
tctttgatcaatgggcggcccagtgctgaccaactgacctcagagttgctggacttcacc
tcagcccgctacatccgcctgcgtctgcagagaatccgcacgctcaacgccgacctcatg
accctgagctaccacgaccccaaggaggtggaccccatcgtcaccagacggtactactat
tcaatcaaagacatttcagtgggtgggatgtgcatctgttacggacacgcccagagctgt
ccctgggaccccgttgccaagaagttgcagtgtgtatgtgagcacaatacctgtggggag
agctgtaatgagtgttgccctggctaccaccaggaaccgtggcaaccgggaaccctctcc
gatggcaacacctgcgagaaatgtaactgccacgacaaggccaacgactgctactttaac
cagacggtggccaaccgcaagatgagcatgaactcacatggtgacttccatggcgggggc
gtttgtatcagctgtacccagaacacggccggtgtcaactgtgaggcctgcgcagatggc
ttctacagacccaaccaggtgtctccacacaatgataacccatgtgtggagtgcagctgt
gacatgaaggggtctttgactcctgcctgtatcagagatgacaaccacgccaagcctgag
aatggtctgaacccaggccagtgtctgtgtatggagggctttgcgggcgagcgctgtgac
cgctgtgcctttggctacagggacttcccactgtgttcacgctgtgagtgcagtctggag
ggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaatgtgatgggggcc
gactgtgacctgtgtaagcagggtttcttcaacctggagggcagtgacccagagggctgc
actgagtgtttctgcttcggtgtgtctgacgtgtgtgagagctcaccctggtctatgtct
cagacagtgcactccaatggatggctccttacctctgaaagcgtctctgtctacacggca
cccctcatagatgaagacaacaacctcatcatcccaaacatcaccatgatccaatcgtac
cgttttgtttctacatgggccgccccagagtccttcctggggaaaaggctgacatcgtac
ggagggtttttgagctacagcgtggcatatgatgtttcagtggacaacgtggacaggtct
ctgccgtcacagtttgatttgattattgagggtaatgggaggaccctgcgtcagatgccc
cccaggcagctcttgttgacgcccctgaacgagcagcatgtttctgtgcagctcttgcca
cagggcttcgtagacctgcacacaggtcagagggtggacagggacgagctgatgactgca
ctggccgacgtggccgggctgaggatcagaggtcacctcaatgccagtgcagagggggaa
ctcagattgagcactgtatctctggacatggtagacataaattctactaacacagtccag
gcccgggacgtggagcagtgtgagtgtcccttgggctactctggaacatcctgtgagtcc
tgttcatctgggttctatcgcctcggggggatcctgttcggaggcaactgtctccagtgt
gagtgtaacaaccatgctacggaatgtgacatcaacagagtgtgtctggactgtactcac
aataccactgggccccactgtgaccaatgcctccacggttactatgggaacccctctgag
ggcaccccggaggactgccagagatgcgcttgcccgctgacagtggcaacgaacaatttc
agccccacctgtctcctggagggccctgggcaggtgacatgtgaccggtgtcagcagggt
tacactgggactaagtgtgagaggtgtgctaacggttaccacggcgacccgacggtggca
gaccaggagtgcgtggtgtgtgagtgtaacggtaacgtggacccctgggagccgggccac
tgtgacaccagcagtggtgtgtgtctgaagtgtcacagccacaccagcggagaccagtgt
gagaggtgtgaggacggctactacggtgacgccatcaccgccaagaactgccaggcttgt
ggttgccatgacaaagggtcgtactcgggagtgtgtgacctgctcactggacagtgtacc
tgcaaacccaacgtggtgggagagaagtgtgaccggtgtcaggtgggcttccacggtctt
ctcagcggacaggggtgcagagaatgtgactgtatccagtcaggatctgtgtccgtggcc
tgtgaggaagatgggaggtgccaatgcatcccaggggtggcgggggacaagtgtgaccgc
tgtcatcacagttactttaactaccagggcagtggctgtacacagtgtgagtgtgcccac
acccatggcaactgtaacgtgacgacaggcgagtgtatctgtcctccccacaccagagga
gagaagtgtgatctgtgtgaggaaggtcactggggtcacgacactgtgacaggatgtaag
tcatgtaactgcagtgagatgggcagctatgccaccgagtgtggcaacaccaacgggcag
tgccagtgccgctctgatttcgctgggcagaactgtgaccgctgtgccatgggctacagg
ggctacccagaatgcacggggtgcaactgcaacatcaacggcaccagagaggagttctgt
gatgaggcactgggcgtgtgcagctgtgaggccccagggaactgtgtgtgcaaggacaat
gtgggtggaggtggctgtgatgagtgtaagaagggaaccttgggcctatctgtttctaac
ccggccggctgcagcccctgcttctgtttcggggtctcctcagactgtgaggagctgggt
gggatggtccgggtgccgatcacattgggttctgacccagagctgctgcttgtggtcagt
cagagtgacctccagggcagtgtagtgggggtctactaccagaacccagacatgctgcta
gacactagggacatagagacccccagcctggctggaccctactactggaggctgcctaaa
cactaccagggaaacaagttgttgtcgtatggagggaagctatcctacgtggtggcgttc
tatgctatggacggggccggcctggccaactacgagcctcaggtcctgatgagggggggt
catctggggaagcaggtcatctacatagacatgcctgcccctgagaacggggtaacaacc
cgtcaggacgtcccactgactgagcacaagtggaagtatttcaactctgtgtcagagaaa
gctgtgagtcactctgacttcatggcagtcctgagccacattgagtacatcaccatcaag
gcatcgtatggtacagggctgcagcagagcagaatatccaatatcactatggatacggcc
ctagaggcggagcaagggttggaggatatggagttggcgagtctgatcgagatctgtgaa
tgtccagctggctacgccggactgtcctgccaggagtgtgccccgggctactaccgccaa
ccagtgactgagctgaacaagcgggggaagagacccctgatccagccgtgtgtgccctgc
cgttgtaacaaccacagccaggcctgtgacctggacacgggagaatgtctgggctgccaa
cacaacacagcaggggagcactgtagcgtgtgttcctcggggtactatggcgacgtgaaa
ggctccgtcagggactgctcgctgtgtgcctgccccctcaaagagaacagcttcagtcct
acctgtactctagagggagtggtgggagacttccgctgcaacgcctgcaagcccggctat
gaggggcgctactgtgagaggtgttcagtgggttactatgggaacccgtctggtccagga
gggaggtgtgaggcgtgtcagtgtagtactgcaggttctctccatccagcgtgtgactct
ctgacgggccagtgtgaatgtaaagccggggtcaggggacacctgtgtgaccagtgcgag
gcgagacacgtcctggacgggtaccagtgtgtcttgtgtgatgatgagtgtaccagggtg
ctcctggatgacctggatgcagtagagtgctccttcctgtctgtcaacctgaccggggtc
atcctgtcaccctacagcacactggtcaacttggagaacgacacgcaagaggtcaagact
ctgatgtcttcgtataggagcccagactatcacctgaccagggatgaggaggacatgaca
aacctcacccaggacatagacggactgctacagaaggctatgggtgtgtctgctgatgga
gaggaagtggcccggtccacagagaacagcgttacccagggggccgagcttctggagtac
atcaacaccattcagactgctatacaagccctggcggagcaagctggccgtctgaacagg
acagacaacgtggagatgaacgaggctaagagcagacggctaatgaagcaggtggcggcc
atgttggaaacaatcagagtggtcgacttagcccaggccaacgccagcgtctctacagaa
ctctgggctgccgaggctctcctccagagggtgcagaagcacctccaggagccccaggga
gtgatagagtcccagaccctcaacatctccagcagtctgacccaacaccaacagcagcta
gtggatgcccaggcccttctaaacactgccagggagaacaacaaccacacacacaccctg
ctgggcagcatcaacaccaatctgccacagtaccagggtctgaggcagaatgtgggccgg
ctgaaccagacggcagaaacccaactggaggagactcaggacatcctggctgatgctgtc
aatctggcagaggacatgagcaacggtacctctcaactggagggggccaaggaacagctg
gagcagtggaaccccatgttgaggaagcatgtggatgctctggtgatggagctgaggaag
caagaggctctggagctggtctacaaggctgaggaccacgcccaagatctgagcaagaag
gcccaggctctgcagagttctctagcggaggtgatgaataccactctgaaagccaccagt
gcagcgcatgccaactctaacatcagagttaacatccagcctgcagagcagatggctaac
cgagccatcctgactgctgctatggccctcaacatgacggcccagcaagaggtgtcactt
actgatctgggatctgaggctgtgcagagtagtgctaagatactggctgagtgtctggcc
ctgaacaacagcactgggggtctcctcgctaacatcagtgatgtgacagacagaatggcc
ttgttgataagtaaccttcataacaccagcagacgcatcccagagccagccttcctgctc
catagccggcccaacggctccagtgagcaggtgctggaggccaaagagcaggctgccatg
gccaactcctccctgcagagggcactggagcacctggaggagctcagggtcagactggag
gagtccagcaaggcagtggcccaggccaaaaccagcatctccaacacaaaccagctgttc
tctgactcacactcaaccgccaggactgctgagtctaagctgaatgaggcagagagtcgt
accgagaggctgtatgaccgtcttaaacccctgaagaccctgcgggaaaacctgagcaga
aacctgtctgagatcagagagatgatcaaccaggcccgcaaacaggctgcctcgatcaag
gtgtcagtgctggcagacaaagactgtgtgagggcctacaagcctgagatgtcctccagt
aacttcaacactctaactatgaccgtcaagaccagcgagcctgacaacctgctcttctat
atgggcagcagctccagcgtggacttcatggcagtggagatgcatcgaggcaaggtgggg
ttcttgtgggatgtgggttcaggccacgccaaactggagtaccccgacatccagatcaac
aacaacaagtggcatcgcatcaacgccacacgctttgggaggcacggcacgctgtcagtc
caccagctggagtcagaccccctgcccgcggtcaagactacctcaccacgctctgctacg
gtcctggatgtcaacaagtttaccctcatatttgttggtggcctgggactccagatcaag
aagtcctccgcagtgaagatgacccagttcaagggctgtatgggggaggcgtcgctcaac
gagaagaacatcgggctgtggaactacgccgagagggagggccagtgtcgcggctgcttc
atgagtccgcagacggaggagacatccttccactttgatggcagtggctactcagtggta
gagaaacccctccgctccacctccacctccatcgtactgctgttcaagaccctctccccc
aacggcctgctgctctacctggcctccaatgccacgagggacttcctgtccattgagctg
gtggagggccaagtccatctaacctttgaacttggctctggtcctctgaccctctcctcc
aacaaagcctataacactggcagctggtacaagatcaccctgcagaggaacaaacgcaaa
gcttatatatctgtgatggctgcagacaactcatcagacaaagagattatagaggcagag
tctcctgggtccgcctctgatctcaaccgctccgacctggacccaatctacatcggggga
ctgcccatgtctcgacctatcaggagacaagtagtagcacggtcctatgtgggctgcatc
aaaaacatggagatcgcccgctccaactttgacctgctccgagactcctatggtgtcaag
aaaggctgtgtgttagagccaatccgcagtgtgtctgtactgagagagggctatgtggag
ctgccatcaatgtctcttggctcccagggggagctgctggcctccttctccacccgcaac
cacactggcatcatcctggcaggcttcagcaaggcaggcacccgcaaacgcagacaggca
cgccagcccatcctggcggtcatgctggtgtcggggcacttggaggttcacgtcaacata
gtggagggcgggggcgtccacaaggttgtggtcaaatcacgctctgggagcttcagtgac
ggacaggagcactctgtcatcctacagaggaacaggaagacgatgacggtactggtggat
gaggaccaccaggagacagtgcgcctgtcctcggagaaggcctctctgaccttctcctct
ctgtacatgggtggcctcccgccagaagagggcgccggactgctacgaaccacttcctcc
ttctacggctgcatcaggaacctggccctggacgccaagttgttggacctgtcagcagca
gtgaagtaccacaatgtggacatggacagctgtctattggaggagaggcctaagagggtc
ctactacctgatgacactgacctggaggccgagcccaccctggacccttccagaccccat
ccaccaccgcccactcagctcagcgctctcacccccggcatgctcacgtgtgcatcgatg
gacaacagcacatccctcccagaggccaatcagtttggcatctccagacacagtcataag
gtcctcaacatcaacgccaacacagtgaggaggagcttctcactggggctgtctgtgcgt
acctttgcccagagtggtttgatctactacatggctcatgccaaccagatggactacgcc
actctgcagctgctagggggtcgtctgttcttcacctgtgacaagggcagcggccccgcc
accgcctccttccctgtgccggtcaacgacggccagtggcacacagtgaagaccgacttc
aataagaagagtgtggtaatcagtgtagacagccaggcgtcagctccagtgctggctaaa
ggcaacactctggatgtagagaacaagctgtacctgggaggactgccccatacctacacc
gccaagaagataggcaacgtgacccacagcttggcgggctgcatccagaaggtgatcctg
aacagcgttgaacttgacacccagagtccagtgtctgaacacttgactgctcactgtttc
actgcagcccaggacgggaccttcttcagtgggagcggatatgctgctctgatgaaagag
gggtacaaggtgggctcagaagtgacactggtatga
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integrated database retrieval system
