Oncorhynchus keta (chum salmon): 118371627
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Entry
118371627 CDS
T09424
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118371627
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118371627
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
118371627
NCBI-ProteinID:
XP_052346284
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All DBs
Position
32:2637924..2745235
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AA seq
603 aa
AA seq
DB search
MLRILDPVVTVVTISFVVEGVLGGYGMSMFAAQTSPPDPCYDENGNPRRCIPDFVNSAFG
KEVRTSSTCGKTPGRYCLVTEKGDERNRNCHTCDASDPKKYHPPAYLTDLNNPHNLTCWQ
SENYIQYPQNVTITLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSTQC
RKMYTKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHHTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKTISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTTASSTEEPADCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGDWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKTGKKYLLLGNNEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggattttggatcccgtggtcactgtcgtgaccatttcctttgtggtcgagggg
gtgctcggtggctacgggatgagcatgttcgccgcgcaaacatcccccccggacccttgc
tacgacgagaacggtaacccgaggagatgcatccccgattttgtgaactctgctttcgga
aaggaagtccgcacttccagcacctgtggtaaaaccccgggtaggtactgcttggtaaca
gagaagggcgatgagagaaataggaactgccatacgtgcgatgcctcggaccccaaaaag
tatcacccaccggcatatctaacggatctcaacaacccccataatctcacatgttggcaa
tcggaaaattacatccaataccctcaaaacgtcaccataacactgtcactgggcaagaaa
ttcgaagtcacctacgtaagcctgcagttctgctcacctcgacccgaatctatggctatc
ttcaagtctatggactatggcaaatcttgggtacctttccaatactattcgacccaatgc
agaaaaatgtacaccaaaccgagcaaggccaccattaccaaacaaaacgaacaagaggcg
atatgcacagactcccacacggacatgcaccctctatccggcggtctcattgccttcagc
actctggacggcagaccgtcggcgcacgacttcgacaactcgccggtgctccaggactgg
gtcaccgccaccgatatcaaggtgacgttcagccgattgcacactttcggtgatgagaac
gaggatgactcggagctagcccgggactcttatttctatgcggtgtccgatctgcaggtt
ggcggtcgatgcaaatgcaatggccacgcttcgcggtgcgtaaaagacagggatggaaac
cttgtttgtgagtgcaaacatcataccgcgggaccggagtgcgacaggtgcaagcctttc
cattatgatcggccgtggcaacgcgcaacagcgagagaagccaacgaatgtgtcgcctgt
aactgtaacctgcatgccaggcgatgccgtttcaacatggagctgtacaagctgtctggg
aggaagagcggaggagtctgtctcaactgtcgccacaacacggccggacgccactgtcac
tactgcaaggagggttactacagagacctgtccaaaaccatctctcacaggaaagcctgc
aaagcatgtgattgccatcccgtgggtgctgctggcaaaacctgtaaccaaaccacgggt
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagattcccgttgttcccccgacaacc
acagccagcagtacagaggagccagcagactgtgactcctattgcaaggcgtcgaaaggc
aaactgaagatcaacatgaagaaatactgcaagaaagattacgctgtccaggtgcacatt
ctgaaggcggacaaggcgggcgactggtggaagttcaccgtcaacatcatctctgtctac
aagcagggcgagagccgcatccgccgcggcgaccagttcctgtgggtcagggccaaggat
gtggcgtgcaagtgtccaaagatcaagaccgggaagaagtacctgctcctgggtaacaat
gaggattctccagggcagtctggagtggtggccgataagggctccctggtcatccagtgg
agagacacatgggcccgtcggctgaggaagttccagcaacgtgagaagaaaggcaagtgc
aagaaggcatag
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