Oncorhynchus keta (chum salmon): 118371833
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Entry
118371833 CDS
T09424
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118371833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118371833
03021 Transcription machinery [BR:
oke03021
]
118371833
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118371833
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
118371833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
118371833
NCBI-ProteinID:
XP_052364985
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MADGGVMSQYESSGPDSIINLSVSSKSTMENGDIVKGVLTNGRDTQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLT
QLPQSQANLLQTPTITIAPQPATPTRTVTATPGQLLIHSQTPPPKGLGTPTLEDANDLEE
LEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
KWLNDAENVSSESSPSLSPLGSGHGSPSLASDLNSRRRKKRTSIDTNIRVALEKSFLQQN
QKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNT
VPQTTVTVTPSLPVTSFSLTDRTLVPATGNTASVISSTPTVPSMSHTPSSSVTTMSQPAV
TMTQAGQMLYSNGGGLAAMAAAAAGISPGLMPSSQFNTGGALLNLTTAGFGGALATIQAL
ASSGSFPITTLDGNGNLLFANTSMSGSAPSMVNTPLFLNPQSLSLLGSNPVSFIPASALS
LQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggagtaatgagccaatatgaaagttcaggaccagactcgataatcaac
ctgtcagtgtccagtaaaagcaccatggagaacggggacatagtcaaaggcgtgctgacc
aatggccgggacactcagaagcagactgtcatgtccctcaccaacgcacagtcacaggct
ctgctgcaacagttgaccttgtctccagcgcagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagctgttcagcagcactccgccagccaggcccagaacagcagc
accacgggggccgccatctctgcctccgcagccacccccatcaccacccaactaccactg
tcccagcctatacacatcactcctctccagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagcctcagttcttcatttcccagactcca
cagggacagcccagtatgtttcagtatcataatcttttgcaagcccaaaatcttctcact
caactacctcagagccaagctaacctcctacagactccaactatcacaattgccccacag
ccggccactcccacgcggaccgtaactgccacccctggccagctcctcatccacagccag
accccgccccctaagggtctgggcacgcccactctggaggatgccaatgatctggaggag
ctggagattttctccaaggccttcaaacagaggaggatcagactgggcttcacacagggt
gacgtggggctggccatggggaagctgtatggtaatgacttcagccagaccaccatctcc
cgctttgaagcactcaacctgagcttcaagaacatgtgtaagctgaaaccgctgctggag
aagtggctcaacgacgcagagaatgtgagctcagagtccagccccagcctcagtcccctg
ggctctggtcacgggtcacccagcctggcgtctgacctcaatagccggcgccgcaagaag
aggaccagcatcgacaccaacatccgtgtggccctggagaagagcttcctccagcaaaac
cagaagccgtcgtcagacgagatctccctgatagcagaccagctgaacatggagaaggag
gtgatccgggtgtggttctgtaaccgccggcagaaggagaagaggatcaaccctcccagc
agctcagctttccagaagtccatcttctcgtcccctactactgccagcctggtgaacact
gtaccccagaccactgtgactgtcaccccctctctgcctgtcaccagcttcagcctcaca
gacaggaccctggtgccagccaccggcaacacagcatccgtcatctccagcacccctaca
gtcccctctatgtcccacacaccctcctcctccgtgacaaccatgtcacagccagccgtt
accatgacgcaggcggggcaaatgctctacagcaatggcgggggtctggctgcaatggca
gctgcagcggcgggaatcagcccgggtctcatgccttcatcgcagttcaacacagggggg
gccttactgaacctaactactgcaggttttggaggagcgctagccaccatccaagctctg
gcctccagcgggtccttccccatcaccaccctggacgggaacgggaacctgctatttgcc
aacaccagcatgtctggctccgcccccagcatggtgaacacgccactcttcctgaacccc
cagagcctgtccttattgggtagtaaccctgtcagcttcatccctgccagtgccctcagc
ctgcaactcaccgctggcaccaacaccatcaccacggcaaccacaccagtcaacaccatc
gtcagagcctctaaggcccaatga
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