Oncorhynchus keta (chum salmon): 118371859
Help
Entry
118371859 CDS
T09424
Name
(RefSeq) integrin beta-8 isoform X1
KO
K06591
integrin beta 8
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04514
Cell adhesion molecules
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118371859
04514 Cell adhesion molecules
118371859
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118371859
09142 Cell motility
04820 Cytoskeleton in muscle cells
118371859
04810 Regulation of actin cytoskeleton
118371859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118371859
04515 Cell adhesion molecules [BR:
oke04515
]
118371859
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118371859
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin beta subunits
118371859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
118371859
NCBI-ProteinID:
XP_052328348
LinkDB
All DBs
Position
20:23055117..23074643
Genome browser
AA seq
880 aa
AA seq
DB search
MTSWLHKYGSPSLHCVLLCVVLAANIIGGSSHSGEPVCSSPPVSSCSECLRRGPQCAWCF
EAGFLDGAEVGERCDLVGNLARRGCGLEFIEHPEVMVEVNATTSSTQVSPGEITLTLRPG
AEASVIVAVQQLERYPVDLYYLVDVSASMQENLDQLKTVGVALSHRMREHSSDLRLGFGS
FVDKPVSPYINVHPSKINNPCSDYEVKCRPAHGFHHVLSMTANMSEFTRIIKRQRISGNM
DTPEGGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLE
NNVYMESTTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPKL
IDVVVDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSVSHDNRSCSNVQPNQTVHT
QSHTHACTHTHAHTHLSSGGGSECVHMRTFVCMCMCVFLTEVYFNITIGLHSCPDDDDDD
VVQVFVRPVGYNESSIIKVHSRCRCHCGPDWHCHDDTTHQSTCGEVTPDTDRNNQDMNNR
DMHTHTPDLDPEHTPTRPHTHTPDLDPEHTPTRPHTHGPELSRQCRAEGSGVDCNGRGVC
VCGKCVCERNSLGTVYGQYCQMDDYSCPYQHGLLCGGRGMCVSGDCVCEEGWTGESCRCP
VSTAICLSDNGLLCSGRGRCVCGRCVCDNHQYSGAFCERCPTCHSSCQSHWRCIDCHLSH
GLSQREAGECNHTCIPLVGYVNDVTVLLGQVWRQCVYKKDNCYYRFHTALVSGNTLLHFN
TQPECVSSRRYVGTFLSVCVLTFLPGLVMLAVLVLLLHRRSLPQGGATDQQYNPTGKDLS
HVPKTNEKTVSYRRDRPPGPDRPMEMHITVPKMPLGEPWQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctacataaatacggttccccgagtctgcattgcgtgctgctctgcgtg
gtattggccgctaacatcatcggcgggagctctcattccggtgagcctgtatgttcgtct
cctcctgtctcgtcgtgttcagagtgcctccgacgcggaccacagtgtgcctggtgcttt
gaggcgggtttcctggatggagcggaggtgggagagcgctgcgacctggtggggaacctg
gcaaggagggggtgtggcctagagttcatagagcatccagaggtcatggtggaggtcaat
gctacgaccagcagcactcaggtgtcaccgggagagatcaccctcacactcagaccaggt
gctgaggccagtgtgatagtagcagtacaacagttagagaggtatcctgttgatctgtac
tacctggtggacgtatcagcatccatgcaggaaaacctggaccagctgaagacggtgggc
gtagccttgtcccaccgtatgagagaacattccagtgatttgcgtctggggttcggctcc
ttcgttgacaaacctgtctccccctacatcaatgtacacccctctaagataaataacccc
tgcagtgactatgaggtgaagtgtcgcccagcccatggcttccaccatgttcttagtatg
acggcaaacatgtcagagtttacacgcatcatcaagagacagaggatatcaggcaacatg
gacacaccagagggagggttagacgctatgctccaagctactgtatgtcagggtgaggtg
ggttggcgtggggaggccaagcgtctgttgttgttgatgacagaccagccttctcacctg
gcgttggacagcagactggctggtatagtcacaccccatgatggcctctgccatctggag
aacaacgtctatatggagagcactaccatggaccatcccagtttaggcctgttggctgag
aagcttctagagaaccacatctactctctctttgctgtggaacaactacaatatcagtgg
tatgaggagttggtcaggttgctaccaggctccaatcttctgttccaggctcccaaactt
atagatgtggtggtggatgcatacaagaggttgttgtcagttgtccaggtgtctgtgtca
gtggaggacagagcattcagccgtttcctggtcagcgtctctcctctctgtccagaagga
tctgtatcccacgacaaccgcagctgctccaacgtccagcccaaccagacggtacacaca
caatcacacacgcatgcatgcacgcacactcacgcacacacgcacttgtcaagtggcggt
gggtctgagtgtgtacacatgcgcacgtttgtgtgtatgtgcatgtgtgtgtttcttaca
gaggtctacttcaacatcaccatcggtctgcactcctgtcctgacgatgatgatgatgac
gtagtccaggtcttcgtcaggcccgtgggttacaatgagtcatccatcatcaaggttcac
tcacgatgtcgctgtcactgtggaccggactggcattgccacgacgataccacacatcag
tcaacgtgtggtgaggtcaccccagatacagaccgtaataatcaagacatgaacaatcgg
gacatgcacacacacacaccggacctagacccagagcacacacccacacgccctcacaca
cacacaccggacctagacccagagcacacacccacacgccctcatacacacggaccggag
ttgtcacggcagtgtcgtgcggagggatcgggggtggactgtaacggtcggggagtgtgt
gtgtgtgggaaatgtgtgtgtgagaggaacagtctaggaacagtgtatggacagtactgt
cagatggacgactactcctgcccctaccaacacggactactgtgtggagggcgaggtatg
tgtgtgtctggtgattgtgtatgtgaagagggctggacaggagagagctgcaggtgccca
gtttctacggcaatctgcctgtccgacaacgggttgctatgcagcgggcgtggcaggtgt
gtgtgtggcagatgtgtgtgtgacaaccatcaatattccggagcattttgtgagagatgt
cccacctgccacagctcctgtcagtcacactggaggtgtatagactgtcacttgtctcac
ggtctgtctcagagagaggctggggagtgcaaccatacctgcatcccattagtgggttac
gtcaatgatgtcacagtcctactaggccaggtatggagacagtgtgtgtataagaaagac
aactgttactatcgcttccacactgcacttgtctcaggaaatactcttctacatttcaac
acacaacctgagtgtgtatccagtaggcggtatgtggggaccttcctcagtgtgtgtgtg
ttgacattcctccctggcttggtgatgctggctgtgctggtgctgctcctgcacagacga
tctttgccacagggtggcgccactgatcaacaatacaaccccactggcaaggatctgtca
cacgtcccaaagaccaatgagaagacggtatcctacaggagggaccgccccccgggtcct
gaccgaccaatggagatgcatatcaccgttcccaagatgcccctgggcgaaccctggcag
taa
DBGET
integrated database retrieval system