Oncorhynchus keta (chum salmon): 118371874
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Entry
118371874 CDS
T09424
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118371874
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118371874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
118371874
NCBI-ProteinID:
XP_035613401
LinkDB
All DBs
Position
20:complement(22897243..22948400)
Genome browser
AA seq
994 aa
AA seq
DB search
MSNDVANRRISSAQLIQASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVT
LLFGKTNSERHLEKCEHSYLPATQTGILKTLDEMRLEQKPIKIDRRLTGSNYIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLERRDDNKQRDLSEEMVESFFEAEVEMERSVCRDVVCTSLKDEEGFLRD
LCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCN
YEAFMNILKLTDKVSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCET
RIQRLQSGKEVDTLKLAANLGKLCIIPLEHVLVHNIALQFFMDYMQAAGAQAELFFWLTV
EGYRVTAQQQLEVMEGWQKDGKKGGSTQGLLKAAALGVYEQYLSDKASPRVQVDEVSVVK
LREKLQKEGDPTPEIFDEIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRG
SDDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFISDTGVCNDHGKTYALYAITVC
RRNHDGSEDSWKTYRRYSDFHDFHMRITEQFENLMSILKLPGKKTFNNMDRDFLEKRKKD
LNAYLQLLLNPEMMKACPTLVHYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSN
AVKRLPDSLAEGMNTAADNMGRMSEKLGQDIKQSMFKVPPLLPKSDVDPEHCRVSAQLDD
NVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRYRTHTHTHQC
HIQRSDCIVCPSGLCRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKNIR
MRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVLLEGFLETM
FPQYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacgttgctaacaggagaatctcttcagctcaactgattcaggccagtctg
tctgtgtggggatgggggggtctaggagtggtgctgttcctcatcacttttggacccttc
gctatcttctacctggccttctatatctgctgcgttgtaggcggtggttttgcggtcact
ctgttgtttgggaagaccaactcagagagacatcttgagaagtgtgaacactcttacctg
ccagccacacaaacgggtatactgaagacgttggatgagatgaggttggagcagaagcct
ataaagatagacaggagactgactggctccaactacatagacgagcctctgcaacaggtc
atccagtttgcattgagagattatattcagtattggtattacactctgagtgaggatgag
tctttcctgctggaaatcagacagactgtccagaacgctttggtccagttctctacacgg
tctaaagaggtggactggcagccttatttcaccaccagactggtggatgacttcgctact
cacctccgagtcttcagaaaggcccaggacagactggagcgcagggatgacaataaacag
agggacttgtcggaggagatggtggagtcattttttgaggcggaggtagagatggagagg
agtgtctgcagagacgtggtctgcacctccctgaaggatgaagaagggttcctgagggac
ttgtgtgaggtgctgctctaccttttactacctcctggagacttccacaacaagaacatg
agatacttcctcagggagattctggcgcgaggcgttctccttcctctggtcaaccagctg
agtgatcctgattacatcaaccagtttgttatctggatgatccgggactctagctgtaac
tacgaggcgtttatgaacatcttgaagctgacagacaaagtgtctgagctggaggctgtt
aaagacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagatgat
atcaatgttataaagaatcagatcaacagtctgttgtttgtgaagaaggtctgtgagacc
aggatacagaggctacagtcagggaaggaagtggatactctgaaactagcagctaatttg
ggcaagctgtgcatcatcccactggaacacgtccttgttcacaacatcgccttgcaattc
tttatggactacatgcaggcggctggggcccaggcagagctgttcttctggctgacagtg
gagggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaaggat
ggaaagaagggaggttccactcaaggactgctgaaggctgcagcattaggggtctatgaa
cagtacctgtctgataaggcgtcccccagggtacaagtagatgaggtgtctgtagtcaaa
ctaagagagaagctacagaaggaaggagaccccacgccagagatattcgacgagatccag
agaaaagtgtatgacatgatgcttcgtgatgagaggtactacccgtcgttcagacagagc
cccctctacatcaggatgttagctgaactggacatgctcaaagaaccgtcttatagagga
tcagatgacggagatggagaatcgttcaacggttctccaacaggaagcattaatctatct
ctggatgacctttcgaattcctgccatgacgacaatatacagctacacgccttcatctct
gacacaggggtgtgtaatgaccacggcaagacctacgccctctacgccatcaccgtgtgc
cgccgtaaccacgacggcagcgaggactcctggaaaacctaccgccgctactccgacttc
cacgacttccacatgaggatcacggagcagtttgagaacttgatgtcgatcctgaagctg
ccagggaagaagacgttcaacaacatggacagagacttcctggagaagaggaaaaaagat
ctcaacgcatacctacagctgctgctgaatccagagatgatgaaagcctgtcctactctg
gttcactatgtctatgacttcctggagaataagcaatacagcaagggcaagggagacttc
gcacgcaagatggatacgtttgtgaacccgctgcgtagctcgatgcgtaacgtgtccaac
gcagtgaagagactgccagatagtctggctgaagggatgaacactgctgctgacaacatg
ggacgcatgtcagagaaactgggccaggacatcaaacagtccatgttcaaggtgcctcca
ctgctccccaagtctgacgttgacccagagcactgccgagtctcagcccagctggacgac
aacgtggatgataacatccccctgcgtgtgatgctgctgctgatggatgaggtgtttgac
ctgaaggagaggaaccagtggcttcgcaggaacatcaagaaccttctgcagcaactcatc
agagccacatacggagacactatcaacaggtaccgtacacacacacacacacaccagtgc
cacatacagcgatctgactgtattgtctgtccctctggtctctgcagaaagatcgttgat
catgtggacttcatgacagctccagaacaggtggcagactacgtcaagaagttcagggat
tcatactggcccaacggaatcctagcagagtctccgccccgccgggacaagaacatccgc
atgaggacacgggtcgccgccaagaccaacctattgggaatcatgccagatgagttgaag
cacatcataggggcggatacgactcgtaaaggcatccttcgtgtgtttgacatgttccaa
cacggaccaatgaatcgtcggctggtctacgtgctcctagaaggattcctggagaccatg
ttccctcagtacaagttcccagagctgtttgtcaaactgcattcccgttcgccgcgcaca
gccagatatacacagaaactcaagagcacctccctgaagaggtga
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