Oncorhynchus keta (chum salmon): 118371900
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Entry
118371900 CDS
T09424
Symbol
pigm
Name
(RefSeq) GPI mannosyltransferase 1 isoform X1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
oke01100
Metabolic pathways
Module
oke_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
118371900 (pigm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118371900 (pigm)
Glycosyltransferases [BR:
oke01003
]
GPI-anchor biosynthesis
Core oligosaccharide
118371900 (pigm)
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GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
TMEM119
Motif
Other DBs
NCBI-GeneID:
118371900
NCBI-ProteinID:
XP_035613446
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Position
4:25851860..25858316
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AA seq
426 aa
AA seq
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MCFSKVGFIAFIAMVINCTALMQRKSHKIDVVVAAAEKYFGFGVYQDRTMVVKYTDVDYH
VFTDASKFITQGQSPYHRSTYRYTPLLAWILTPNVYLSHVFGKLLFITCDVLSGHLIYLI
LRQRGLSCEAACRVCSLWLLNPLPAGVSSRGNAESVLTALVLATLLCLELRQLPMAAILY
GLAVHMKIYPVTYALPIALSLQRKQNAEERGVGWWRRALGFPLRLLNKELFLFAGVAGVM
FCGLTVLFYNMYGWDFLQETYLYHLTRRDIRHNFSPYFYMLYLTADSPWSLALGLAAFLP
QALLLFLVSLAFHTDLALCCFLHTAIFVSFNKVCTSQYFLWYLCLFPLVLPRLTLSPKQG
VELLALWFAGQGIWLATAYYLEFEGYNTFLLIWLAGLMFLIINSFIMVQIITHYKPSDTT
QRLKVE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttagtaaggttggatttattgcgtttatagccatggtgatcaactgcactgca
ctgatgcagcggaaatcacataaaatagatgtggtagttgcagcagcagagaaatatttt
ggttttggcgtctatcaggacagaactatggtggtgaaatacactgatgttgattatcac
gtgtttacagatgcgtcaaagttcatcacgcagggccagtctccataccacagatccacc
taccgctacacccctctactagcatggatcctgacccctaacgtctacctcagccatgtc
ttcgggaagcttctcttcatcacgtgtgacgtgctctcaggccacctgatctaccttatc
cttcgccagcggggacttagctgcgaggctgcctgccgtgtctgctccctgtggctactc
aacccgttaccggccggtgtgtccagccgaggcaacgccgagtcggtcctaacagccctg
gttctggccacactgctctgcctggagctgaggcagctccccatggcagccatcttgtac
ggcctggccgtccacatgaaaatttacccggtgacttatgccctgcctattgccctatcc
ctacagagaaagcagaatgcggaggagaggggagtggggtggtggaggagagctcttggg
tttcccctcaggctattgaataaggagctgtttctgtttgccggtgtggccggagtgatg
ttctgtggattgactgtcctgttttataacatgtacggctgggacttcctccaggaaacc
tacctgtaccacctgacgcggagggacatccgccacaacttctccccttacttctacatg
ctgtacctgactgcagacagcccctggagcctggccctgggtctggctgccttcctgccc
caggccctgctgctgttcctggtctccctggccttccacacagacctggccctctgctgc
ttcctccacaccgccatctttgtctccttcaacaaagtctgcacttcccagtacttcctg
tggtatctatgtctgtttcctctcgtcctacctcgactgaccctgtcaccaaaacaagga
gtagaactcttggctctctggtttgctggacagggtatatggttggccactgcgtactac
ctggagtttgagggatacaacacctttctgctcatttggctggctggactgatgttcttg
atcattaactcattcataatggtacagattataacccattacaaaccatcagacactacg
cagagattgaaagtagagtga
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