Oncorhynchus keta (chum salmon): 118371940
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Entry
118371940 CDS
T09424
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
118371940
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
118371940
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
118371940
NCBI-ProteinID:
XP_035613491
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All DBs
Position
8:complement(28303872..28323010)
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AA seq
671 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGAWCYQRAVTLQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEEDDEEQSAVAWH
KMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHSMDPDNLELTFDFFEEDMGE
HVVPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIEG
LQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEFD
VHLSKDCVPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYNQLQQLKLGHASALKVND
HKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMRDGSWEGNLSSYFNMNLF
LDIILTCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISEIYPELMDIRCRT
TQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHENRTKLREQG
IDGLIYDRIGDDQVEQPNIFKVEEQHTLQETLKSFVCSCYPIPCQAAPVCPSSASKEHND
SAESDSGLSSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagcctggtgctatcagagagctgtgacccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctatcgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagaatgtgtg
gactctgggtggctgacgtgccagacagagatccgtttgcgtctgcactactcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgcttcaggatcaagctgaca
ctggaaggtgtagaagaggaggaggaggatgatgaagagcagagcgcagtggcgtggcac
aagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgccac
tcccagcctgagtgtggttacgccctggaggcctcacagtggacagagtacgtcatccac
tccatggaccctgacaacctggaactcacctttgacttctttgaggaggacatgggtgag
catgtggtgccaggggatgcccacccggggaccgtgggtacggcctgccttctctcctca
ttctttgtggagagtggcaaggacacaggtgtggtcactctgcccatcatgaaacgcaac
tccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatcgaggga
ctgcagtgtgacatgagctcgtccttcaccaagtactggaggaagaggagtgcccctctg
gacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaagttagggag
aacacaattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagagtttgac
gtccatctctccaaggactgcgtccccatcgtgtaccacgatctcacctgctgcatctcc
actaagaagaaaggagacaaactctctctggacctgtttgaagttcctgtcaaagacctc
acatacaaccagcttcagcagctcaagttgggccatgcttctgccttgaaggtgaacgac
cacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttcccttccttttcc
cagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgggtttgt
cagatgagggatggttcgtgggaaggaaacctgtcctcttacttcaacatgaacctgttc
ctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatcgtcttctcc
tgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccccatcctg
ttcctgacccagggcatctctgagatttacccggagctcatggacatccgctgtcgcacc
acacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcccacact
gaggagctccttcagaatctggagcacatccgagaggcccagtctaaaggcctggtagtg
ttctgctggggagacctcaacaacgaccacgaaaacaggaccaagctacgggaacagggc
attgacggactcatctacgacaggatcggtgacgaccaggtcgagcagcctaacatcttc
aaagtagaggagcagcacacgctgcaggaaacgctcaagagctttgtgtgttcctgctac
cccatcccctgccaggcggctcctgtctgcccctcctccgcctccaaggagcacaacgac
agtgcagagtctgactcgggcctcagctcctcctga
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