Oncorhynchus keta (chum salmon): 118371991 Help Entry 118371991         CDS       T09424                                  Name (RefSeq) clathrin heavy chain 1   KO K04646   clathrin heavy chain Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04142   Lysosome oke04144   Endocytosis oke05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:oke00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     118371991    04142 Lysosome     118371991  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     118371991  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118371991   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oke04147]     118371991 Membrane trafficking [BR:oke04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     118371991 Exosome [BR:oke04147]  Exosomal proteins   Proteins found in most exosomes    118371991 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_PEP5_VPS11 TPR_Vps41 TPR_ELP1 Motif Other DBs NCBI-GeneID:  118371991 NCBI-ProteinID:  XP_052313847 LinkDB All DBs Position 12:24212500..24282394 Genome browser AA seq 1679 aa AA seqDB search MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRKFQSVPAQPGQTSPLLQYFGI LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTNSLTELFESFKSFEGLFYFLGSIVN FSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPDLWASVL LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC VDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTEL AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN HPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS KVKQLPLVKPYLRSVQNHNNKSVNEALSNLFITEEDYQALRTSIDAYDNFDNISLAQRLE KHELMEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLGWFLME DKKECFAACLFTCYDLLRPDVVLETAWKHNIMDFSMPYFIQVMREYLSKVDKLETSESLR KEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYQAPAGYPQAPQAQPGFGYSM NT seq 5040 nt NT seq  +upstreamnt  +downstreamnt atggctcagattctgcctatccgctttcaggagcacctgcagctccaaaacttggggatc aacccggccaacatcgggttcagcaccctgacgatggagtctgataagttcatctgtatc cgagagaaggtgggcgagcaagcgcaggtggtgatcatagacatggccgaccccaacacg cccatccgcaggcctatctctgcagacagcgccatcatgaaccccgcctccaaagtcatc gcacttaaagccgccaaaacccttcagatctttaacattgagatgaagagcaagatgaag gcccacaccatgaccgacgatgtcaccttctggaagtggatctccctcaacacagtggca cttgtaactgacaatgccgtctaccattggagcatggagggggactcccagccaatcaaa gtctttgaccggcactccagcctggcgggctgtcaaatcatcaactaccgcactgatgcc aagcagaagtggctgctgctcatcggcatctccgcacagcaaaaccgtgtggtgggtgcc atgcagttgtactctgtggacagaaaggtgtcacagcccatcgagggccacgctgccggc ttcgcccagttcaaaatggagggcaacacagaggagtccacactgttctgctttgctgtg agaggacaggccggaggaaagttgcacatcattgaggtgggcaccccacccacagggaat cagccttttccaaagaaagcagtggatgtgttcttccctccagaggctcagaatgacttc cctgtggccatgcagataagctccaagcaggatgtggtgttcctcatcaccaaatatggc tacatccacctgtacgacctggagactggcacctgcatctacatgaacaggatcagcggg gagaccatctttgtcacggccccacacgaagccaccgctgggatcatcggggtcaacagg aaaggacaggtcctgtctgtgtgtgtggaggaggagaacatcatcccctacattaccaat gtgctccagaacccagacctggcactgcgcatggctgtccgtaacaatctagctggggcc gaggagctgttcgcacgcaagttcaacaacctgtttgctgggggaaactactctgaggct gccaaggtggctgccaacgcaccaaagggtatcctgcgtactccagacactatccgtaag ttccagagtgtgccagcccagccgggccagacctctcccctgctgcagtactttggcatc ctgctggaccagggccagctcaacaagtttgagtccctggagctgtgcaggcccgtccta cagcagggacgcaagcagctgctggagaagtggctcaaagaggacaagctggaatgttct gaggagctgggggacctggtgaagtcagtggaccccaccctggctctctccgtctacctg agggccaacgtacccaacaaggtcatccagtgctttgctgagaccggacagttccccaag atagtcctgtacgccaagaaggtgggctacactccagactggatcttcctgctgaggaac gtgatgaggatcagtccagaacagggcctgcagttctcacagatgctggtccaggacgaa gagcctctggctgacatcacacagattgtggatgtgttcatggagtataacctgatccag cagtgtacctcattcctattggacgccctgaagaacaacaggccatctgaggggccgctg cagacacgcctactggagatgaacctcatgcacgccccacaggttgctgatgctatcctg ggcaaccagatgttcaccaactacgaccgtgcccacatagcccaactgtgtgagaaggct ggcctgctgcagagggctctggagcactacaccgacctatacgacatcaagcgggccgtg gtgcacacacacttgctcaacccagagtggctggtgaatttctttggctccctctcagtg gaggactctctagagtgcctgagggccatgttgtctgccaacattcgtcagaacctgcag atttgtgtccaggtggcctccaagtaccacgagcagctctccaccaactccctcaccgag ctcttcgagtccttcaagagctttgagggtctgttctacttcctgggttccatcgttaac ttcagccaggatgcagaggtccacttcaagtacatccaggctgcctgcaagacgggacag atcaaagaggtggagaggatctgcagagagagcaactgctacgacccagaacgagtcaag aacttcctcaaggaggccaagctcaccgaccagctcccgctcatcatcgtgtgtgaccgc ttcgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaaatacatt gagatctacgtgcagaaagtgaaccccagccgtctgccggtggtgattggagggcttctg gacgtggactgttctgaggacgtcattaagagtctgatcctggtggtcagaggacagttc tccactgacgaactggtggccgaggtggaaaagaggaacaggctgaagcttctcctgccc tggctggaggcccgtatccatgagggctgtgaggagcccgctacccacaatgccctggcc aagatctacatcgacagtaacaacaaccctgagcgcttcctgcgtgagaacccctactac gacagccgcgtggtgggcaagtactgtgagaagagggacccccacctggcctgcgttgcc tacgagagaggacagtgtgaccaggaactcatcaatgtgtgcaatgagaactccctgttc aagagtctgtctcgctacctggtacgtcgcagggacccggacctgtgggccagcgtgctg ctggagactaaccccttcagaagaccactcatcgaccaggtggtgcagaccgccctatct gagacccaggacccagaggaggtgtcagtcacagtcaaggccttcatgactgcagacttg cccaatgaactcattgagctactggagaagatcgtactggataactccgtcttcagtgaa cacagaaacctgcaaaacctgctgatcctgacggccataaaggcggaccgtacccgtgtg atggagtacatcaaccgcctggataattatgacgccccggacatcgccaacattgccatc agcaacgagctcttcgaggaggcattcgctatcttcaagaagtttgacgtcaacacatcc gctgtgcaggttctgattgagcacattgggaacctggaccgggcctatgagttcgcagag cgttgcaacgagccggccgtgtggagccagctggctaaggctcagctgcagaagggcctg gtcaaggaggccattgactcctacatcaaggctgacgacccctctgcctacatggaggtg gtacaggccgccgaccagagtggtaactgggaggacctagtgaagttccttcagatggcc cgtaagaaggcccgggagtcctatgtggagacagagctgatctttgccctggccaagacc aaccgcctggctgagctggaggagttcatcaacggacccaacaacgcccacatccaacag gtcggcgaccgctgttatgacgagaaaatgtacgatgcggccaagttactgtacaacaac gtgtccaacttcggccgcctggcgtccaccctggttcacctcggggagtaccaggcggcg gtagacggggcgcgcaaggccaacagcactaggacctggaaggaggtgtgcttcgcttgc gtggatgggaaggaattccggctggcccagatgtgtggcctccacatcgtggtgcatgct gatgaactggaggaactcatcaactactaccaggaccgtgcttactttgaggagctgatc accatgctggaggcagccctggggttggagcgggctcacatgggcatgttcactgagctg gccatcctctactccaaattcaaacctcagaagatgagggagcacctggagctcttctgg tccagagtcaacattccaaaggttctgcgggcggcggagcaggcccacctgtgggcggag ctggtgttcctgtacgataagtacgaggagtttgacaatgccatcatcaccatgatgaac catcccacagacgcctggaaggagggccagttcaaagacattatcaccaaggtggccaac gtggagctgtattacaaagcaactcagttctatttggagttcaagccgttgttactgaat gacctgctcatagtgctgtcccccagactggaccactcccgtgctgtcaacttcttcagc aaggtgaaacagctacccctggtcaagccctacctgcgctcagtacagaaccacaacaac aagtctgtcaatgaagcacttagcaacctcttcatcacagaagaggactatcaggctctg aggacgtctatagatgcctatgacaacttcgacaacatctcgctggcccagcgcctggag aaacacgagctgatggagttcaggagaatcgctgcgtacctcttcaagggtaacaaccgc tggaaacagagtgtggagctctgcaagaaggacagactctacaaggatgccatgcagtac gcgtcagagtctaaggacacggagctggctgaggagctgttgggctggttcctgatggag gacaagaaggagtgctttgccgcctgccttttcacctgctacgacctgctgaggccagac gtggtgctggagacggcctggaagcacaacatcatggacttctccatgccctacttcatc caggtcatgagagagtacctctccaaggtggacaagctggagacctccgagtccctacgg aaagaggaggagcaggcgacagagacccaacccatagtctatggcacaccccagctgatg ttgactgctggccccagtgtgcccgtacccccccagcaggcctatggctatggttaccag gcccctgcgggctatccccaggcccctcaggcacagccaggcttcggctacagcatgtga

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