Oncorhynchus keta (chum salmon): 118372135
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Entry
118372135 CDS
T09424
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04518
Integrin signaling
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
118372135
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118372135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118372135
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118372135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_1
SH3_9
RhoGEF67_u1
PH
SOS1_NGEF_PH
Mis12
ZapB
CENP-Q
Motif
Other DBs
NCBI-GeneID:
118372135
NCBI-ProteinID:
XP_052344279
LinkDB
All DBs
Position
30:complement(33608501..33636949)
Genome browser
AA seq
766 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGTVPKYCQEP
RNEAECIANIKEFLRGCTSLKVEGFEPECLYSGENFNKVLTTLLGVNFATQDCGTERSCP
QSSTPAPSQSTTSHTHTSSRSKSLPRQSKPAEMSENGGGGLVLVKARFQFKQNNEDELSF
NKGDLISVSRQEEGGWWEGSLNGKTGWFPSNYVREVKPCDKPVSPKASQLTKNYYTVVVQ
DILEHEREFVKELQTMLSCYLRPLKASNKLSITDSGSLSGNLEEILTFQQGLVLALDECT
KVPESQQRLAACYLNLIGQIRRLYRSYCSSHPSAVCVLTDHSEELGTFMESQGASPPGIL
TLTTSLSKPFMRLDKYPILLQELERHMEEAHPDYSDILKVTVAFKSLVAQCQDLRKRKNL
ELQILSEPVRGWEGDSMKSLGHVAYMSLVHMQNGTNEEKEERYLMMFPSVLVLLSASPRM
SGFIYQGRLPLTGSTVSRQTEDTENGHYTFEITGSTMDRITVFCSNPQDLQEWLDHLHAY
SEGASPVGTIIKPVSMVGTPTHLPSFSTPSQANRGPLEPPKTTKPWSLSCLRPAPPLKPS
AALGYKERMSSILKDSSKSSGPIKNFFPKRRAERKHSDEEFLLRKSTAALEEDAQILKVI
EAYCTGASQHQASTAVRKVCVPQVLLPEEEKIMVEEMKNNGQTSIEEKSLVDAVYALKDE
VHELKKENKWMKQCMEEEQKSRKELERVVRKLAKQKNDCAWEDGGH
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaggagcagaccgtaacgtggctgatatcattaggggtgcttaattcaccc
aagaaaaacatagctgacccagaagaatttctgaaaacatctctgaaagatggggtcgtc
ttgtgcaaactcatggagcggctcgtgcccggcactgttccaaagtactgtcaggaaccg
aggaacgaagccgaatgcatcgccaatatcaaggagtttctgagaggatgcacatcctta
aaagtagagggatttgaaccagagtgcctgtactctggcgagaactttaacaaagtgctg
accactctgctgggagtcaacttcgccacccaagactgtggcactgagaggtcatgtccc
cagtccagcacacctgctcctagccagtccaccacctcacacacacacacctcttccagg
tccaagtccctgcccagacaatccaaaccagcagagatgtcggagaacggcggaggcggg
ctggtgctggtgaaggcgcgcttccagttcaagcagaacaacgaggatgagctgtccttc
aacaagggagacctgatcagtgtgtcgcgccaggaggagggcggctggtgggagggctcg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aaacctgtgtctcctaaagcatctcaactgaccaagaactactacactgtggtggtgcag
gacatcctggagcatgagagggagtttgtcaaggagctgcagacaatgttgagctgttac
ctgcgacccctaaaggccagcaacaagctgagcattacagacagtggcagtctgagtggt
aacctggaggagatcctcaccttccagcagggtctggttcttgctctggacgagtgcacc
aaagttccagagagccagcagcgattggctgcctgctacctcaacctgattggtcagatc
aggaggctgtaccggtcatactgttccagtcacccctcggctgtctgcgtactcactgac
cacagtgaggagctgggtacgttcatggagagccagggggccagtccgccaggcatcctg
accctgaccaccagcctgagtaaacccttcatgaggctggacaagtatcccatcctgctg
caggagctggagagacatatggaggaggcccacccggactacagtgacatcttgaaggtt
acggtggcttttaaaagcttggtggcccagtgtcaggacctgcggaaacgtaagaacctg
gaactacagatcctgtcggagccagtgagaggctgggagggagacagcatgaagtctctg
ggtcacgtggcctacatgtccctggtccacatgcagaacgggaccaatgaggagaaggag
gagcgctacctcatgatgtttcccagtgtgctggtcctactgtctgctagtccgcgcatg
agtggcttcatataccagggaaggctgccgctgacgggctccacagtctccaggcagacg
gaggacacggagaacggccactacacctttgagatcacaggaagcacaatggatcgcatc
acagtgttttgcagtaacccccaggatctgcaggagtggctggaccatctccatgcctac
agcgaaggagccagccccgtgggcaccattatcaagccggtcagtatggtgggcaccccc
actcacctgcccagcttcagcacccccagccaggccaaccgtggacccctggagcccccc
aagaccaccaagccctggtctctgagctgcctgcgccccgccccacccctcaagccctcc
gctgcactgggctacaaggagaggatgtcttctatcttgaaggactccagtaagagctct
gggcccattaagaatttcttcccaaaacgcagagcagaaaggaaacattccgacgaggag
ttcctcttacggaaaagtacagctgctctggaggaggatgcccagattctgaaagtgatc
gaggcctactgcacaggggccagccagcatcaggccagcaccgcggtgaggaaagtgtgt
gtccctcaggtcctgctgcctgaggaagagaagatcatggtggaggagatgaagaacaac
ggtcagacaagcatagaggaaaagagtctggttgatgcagtatatgctttaaaggatgag
gtccatgaattaaagaaggagaataagtggatgaagcaatgtatggaggaggagcagaag
tctcgtaaggagctggagagagtggtcaggaagctggccaagcagaagaacgactgtgct
tgggaggatggaggacactga
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