KEGG   Oncorhynchus keta (chum salmon): 118372173
Entry
118372173         CDS       T09424                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04137  Mitophagy - animal
oke04144  Endocytosis
oke04145  Phagosome
oke04148  Efferocytosis
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118372173
   04145 Phagosome
    118372173
   04137 Mitophagy - animal
    118372173
   04148 Efferocytosis
    118372173
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118372173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118372173
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118372173
   04031 GTP-binding proteins [BR:oke04031]
    118372173
Membrane trafficking [BR:oke04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118372173
 Endosome - Lysosome transport
    118372173
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118372173
  Exosomal proteins of other body fluids (saliva and urine)
   118372173
  Exosomal proteins of colorectal cancer cells
   118372173
  Exosomal proteins of bladder cancer cells
   118372173
GTP-binding proteins [BR:oke04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118372173
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 118372173
NCBI-ProteinID: XP_035613861
LinkDB
Position
5:complement(11366543..11384525)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQSGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccccaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatcttcatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacagtctggtggtagcaagtgctgtggtgggaactaa

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