Oncorhynchus keta (chum salmon): 118372205
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Entry
118372205 CDS
T09424
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118372205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oke03029
]
118372205
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118372205
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
118372205
Transporters [BR:
oke02000
]
Other transporters
Pores ion channels [TC:
1
]
118372205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
118372205
NCBI-ProteinID:
XP_035613893
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All DBs
Position
13:complement(42650700..42660737)
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AA seq
470 aa
AA seq
DB search
MGTVHARSMDPLPMHGRDMGVHPDDMIEVQEAEHETKQEVLENKDVVVQHVNIEGLGRTK
EDLLGYEISEVFDAKNLIDVMKKSHIARQKLLRLGIFKEVEVVIDTSDGADALPNGLDVT
FEVTEMKRLTGSYNTMVGNNEGSMVLGVKLPNVFGRAEKLTFQFSYGTKETSYGLSFFKP
QPGNFERNLTLNLYKVTGQFPWSSLKETDRGVSTELNFPLWRTNHTLKWEGVWRELGCLA
RSASFAVREESGHTLKSALSHTMSIDNRNSAIFPKKGALLRINQELAGYTGGDASFLKED
FELQVNRRLVWDSVLSASLWGGCLLPIGGRPSSIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLQRLA
ECIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccacgccaggagtatggaccctctcccgatgcacgggcgcgacatgggc
gttcatcccgacgacatgattgaggtgcaggaggcagaacatgagactaaacaggaggtc
ctggaaaacaaagacgttgttgtccaacatgtcaacattgagggcttgggccgaacgaaa
gaggatctgctgggctatgaaatctcagaggtctttgacgctaaaaaccttattgatgtc
atgaagaagtctcatattgccagacagaaattgctgcgtctgggcattttcaaggaggtg
gaggtcgtcattgatacatcagatggtgcggatgcattgcccaatggtctggatgtgacg
ttcgaggtgacagagatgaagaggctgacaggcagctacaacaccatggtcggcaacaac
gagggcagcatggtgttgggtgtgaagcttcctaacgtgtttggccgtgctgaaaagtta
accttccagttctcctacgggaccaaggagacttcctacggcctgtccttcttcaagccc
cagccaggcaacttcgaacgcaacctcactctaaacctgtacaaagtcacaggccagttt
ccatggagctccctcaaagagacagacagaggagtctccactgagctcaattttcctttg
tggaggaccaaccacactctgaagtgggagggtgtgtggcgggagctgggttgtctggca
cgcagtgcctccttcgccgtgcgagaagagagcgggcacaccctcaagtctgccctctcg
cacaccatgtccattgacaacaggaactctgccatcttccccaagaaaggtgccttactg
aggatcaaccaggagctggctggctatacaggcggagatgcaagcttcctgaaggaggac
tttgagctgcaggtcaacagacggctggtctgggactcggtcctctccgcctccctctgg
ggtgggtgtctcctccccattggaggtagaccgtcctccatcgctgacaggttctatctg
ggcggtcccaccagtgtgcgaggatttggaatgtacagcatcggcccacagagcgagggt
gactacctggggggagaggcgtactgggcaggtgggctccacctgtacactcctctgccc
ttccgtccgggccggggtggcttcggagacctcttcaggacacacttcttcctcaacgct
gggaacctgtgcaacctcaactacggagagggtccaagagcacacctacagaggctggcg
gagtgtatccgctggtcgtatggagcaggcatcgtgttgcgtcttgggaacatcgccagg
ctggagctcaactactgcattcccatgggggttcagagtggagacaggatatgcgacggc
gtccagtttggagcaggaatccgtttcctgtga
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