Oncorhynchus keta (chum salmon): 118372254
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Entry
118372254 CDS
T09424
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118372254
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118372254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
TNFR_ELAPOR1_6th
hEGF
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
118372254
NCBI-ProteinID:
XP_052347975
LinkDB
All DBs
Position
33:13875400..14022610
Genome browser
AA seq
1042 aa
AA seq
DB search
MGSACFSWEVCLFFVLINTCEVMGDVGLADADECSEGTDDCHIDALCQNTPKFFNCICKP
GYKGDGKQCEDMDECENEYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECMDN
NGGCQQVCVNTMGSYECMCTQGFFLSDNQHTCIHRSEDGMNCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCTLTCNYGNGGCQHMCDDTDVGPVCGCHQKYALHSDSKTCIDL
CFVAPRKCRPEFHDDDERDEAAIESSEFNATSIADVDKRVKRRLLMETCAVNNGGCDRTC
KDTATGVRCSCPVGFTLQPDGKTCKDIDECQEATNNGGCDHFCKNTVGSFECSCQKGHKL
LTDERTCQDIDECSFERTCDHTCVNYPGSFDCVCQEGYTLYGLTHCGDIDECSINNGSCE
HSCVNTQGGYECLCPAGQKLHWNKKDCTKAVKCLADGKPAPRAQLSCNKRGGVEVCSLSC
PSNALFLADSENSYTLSCGVPVQPGKAPQKRNATTALLTCADTLPPPIKQKARFKVKDAK
CHLRPRNKEKHREMSKPSLQGGPLPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHIT
AEFEMEMKEASGQCDCATSDSCNVECVRERMKQRLQSAMRTLRKSINKQQFYIQFSGTEY
EVAQKPALHVEQCSTGQVLRDGKCVSCGVGTYYSGDHDQCIVCPPGTYQDTVGQLSCEPC
PSTEGQGIAGAKNVSQCGGQCPPGQSSSDGFRPCNPCPLGSFQPEPGRVLCFPCGGGLMT
KYEGSVAFRDCEAKVHCAPGHHYNSSNHRCIRCPAGTYQSEFGQNYCITCPGNTTTDFDG
ATNVSHCKNQVCGGELGDFTGFIESPNYPGDYPSNVDCIWTINPPHKRRILIVVPEIFLP
IEDECGDVLVMRKSALPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVP
YVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKD
MFPRSFIKLLRSKVTRFLRPYK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcttgtttttcatgggaagtatgtttgtttttcgtcctcattaatacctgt
gaggtgatgggggatgttggactcgcagacgccgatgagtgctctgaaggcacggatgac
tgtcacattgatgctctctgccagaatacccccaaattcttcaactgcatctgcaagccg
gggtacaagggagacggcaagcagtgtgaagacatggacgagtgtgagaatgagtacaac
ggaggctgtgtccacgagtgtatcaacatcccgggcaactacaggtgcacctgctacgac
ggattcatgttggcccacgacggacacaactgtctggacgtggatgagtgcatggacaac
aacggaggatgccagcaggtgtgtgtgaacaccatgggaagctacgagtgtatgtgcacg
caaggcttcttcctcagcgacaaccagcatacctgcatccaccgctccgaagatggaatg
aactgcatgaacaaggaccacggctgcgcccacatctgcagggagacccctaaggggggc
gtggcttgcgagtgccggcccgggttcgagctggcaaagaaccagagagactgtacattg
acgtgtaactatgggaacggaggctgccagcacatgtgtgacgatacggatgtggggccg
gtttgtggctgtcaccagaagtacgccctgcactcagacagcaagacctgcatcgatctg
tgctttgttgcaccccgaaaatgtcgcccggagtttcacgatgacgatgagagagatgag
gctgcaattgagagctctgagttcaatgccacgtcaatagctgatgtggacaagcgggtg
aaacggcggctacttatggaaacctgtgcggtgaacaatggcggctgtgaccggacatgc
aaggacacggctacaggggtccgctgcagctgccccgtgggattcaccctgcagccagac
ggcaagacctgcaaagacatagatgaatgccaggaggcgaccaataacggcggctgtgac
catttctgcaaaaacacggtgggctcctttgagtgcagctgccagaagggccacaagctc
ctcactgacgagcgcacctgccaggatattgacgagtgttcctttgagaggacctgtgac
cacacctgcgtcaactaccctggcagcttcgactgtgtctgtcaggaaggatacactctt
tacggcctcacacactgcggagacatagatgagtgcagcattaacaacgggagctgtgaa
cacagctgtgtgaacacacagggaggctatgagtgtctgtgtccggccggtcagaaactc
cactggaacaagaaggactgcaccaaggcggtgaagtgtttggccgacgggaaaccagcg
ccgcgcgcccagctcagctgtaacaagagaggaggggtggaggtgtgctccctctcctgt
ccgtccaacgcactcttcctcgcagactctgagaacagctacacactaagctgtggtgtg
ccggtgcaacctgggaaggcaccgcagaagagaaacgccaccaccgccctgctcacctgt
gcagatacgttacccccgcccatcaagcagaaggcccgcttcaaggtcaaagatgccaag
tgtcacctgagacccaggaacaaggaaaaacacagagagatgtccaagccgagcctgcaa
gggggtccgctcccgtgtactgacgactgccaggtgacctttgtcaatctgaagtgtgac
tcgtccaagaaacggcggcgtggacgcaagtccccttccaaagaggtttcccacatcaca
gctgagtttgagatggagatgaaggaagcctcaggtcagtgtgactgtgcaacctcagac
tcgtgtaacgtggagtgtgtgagggagcgtatgaagcagaggttacagagtgccatgcgg
accctgaggaagtccatcaacaagcagcagttctatatccagttctctggtaccgagtac
gaggtggcccagaaacctgcactgcacgttgagcaatgcagcaccggacaggtcttacgg
gacggcaagtgtgtgagctgtggtgtggggacgtactatagtggagaccatgatcagtgt
atcgtgtgtccccctggtacataccaggacacagtgggccagctgtcctgtgaaccctgc
cccagcaccgagggacagggcatcgccggggccaagaacgtctcccagtgcggaggccag
tgtccgcctggtcagtcttcgtcagatgggttccgtccctgtaacccctgtcccctgggc
tccttccagccggagcctggacgtgtactctgcttcccctgtggagggggcctcatgacc
aagtacgagggctctgtcgccttcagggactgtgaggccaaagtccactgtgctcctgga
caccactacaactccagtaaccaccgctgtatccgctgcccagccggtacctaccagtca
gagtttggacagaactactgcatcacctgccctggcaacaccaccaccgactttgacgga
gccacgaacgtctctcactgcaagaaccaggtgtgtggcggtgagctgggggactttaca
ggctttattgagtctcctaactaccccggggactacccgtccaatgtagactgtatctgg
accatcaacccccctcacaagagacgcatcctcatcgtggtgcctgagatcttcctcccc
atcgaagacgagtgtggagatgtgctcgtcatgaggaagagtgccctgcccacctccatc
accacctatgagacgtgtcagacgtacgagcggccaatcgccttcacctcccgctcccgc
aagctctggatccagttcaagtccaatgagggcaacagtggcaagggcttccaagtcccc
tatgtcacctacgatgaggactaccagcagctgatagaggacattgtccgagacggcaga
ctctacgcatcagagaatcaccaagagatactgaaagataaaaaactgatcaaagccctg
tttgatgttctggctcacccccagaactacttcaggtacactgcacaggagtccaaagac
atgttcccccgctcattcatcaaactgctgcgctccaaagtcacacggttcctacggccg
tacaaataa
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