Oncorhynchus keta (chum salmon): 118372332
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Entry
118372332 CDS
T09424
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118372332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118372332
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118372332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Neur_chan_memb
HB_ELP1
New_glue
Motif
Other DBs
NCBI-GeneID:
118372332
NCBI-ProteinID:
XP_052340770
LinkDB
All DBs
Position
28:12180106..12382499
Genome browser
AA seq
1608 aa
AA seq
DB search
MGFPGSLQTHDTGLLGEPLHADPAGSRKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQ
NQATMEEAEQKEAEFKAMLEQIKNQQEAAQSNAMATSAGTMSEDVGDDDGGGTLSCSSSE
MSKLSSKSAKERRNRKKKWRQKEQSQREEKGDCEKFVKSESDDGSKKSRFRFPDNRLGRK
SSIMNQSLLSIPGSPFLSRHNSKSSIFSFKGVGSENEFADDEHSMVEECEERRGPRFSPY
RRCSYTSYHHGGGKRNSSVDCNGVVSLISPGTGGRLLPEVKIDKASGDDSPTTEVEVKKK
LSGSLMVSMDQLNTSFGRKERTNSVMSVITNTLAEELEESQRSCPPWWYKFSNMVLIWEC
CPIWLKIKEIVNLIVMDPFVDLAITVCIVLNTLFMAMEHYPMTPHFEEVLFVGNLVFTGI
FAVEMFAKLVAMDPYYYFQEGWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLA
KSWPTLNMLIKIIGNSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCKIALDCELP
RWHMHDFFHSFLMVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLAL
LLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWFKIKLAELVLSLTKKPPVEDEQKTV
DDMYDKKLNCIANQSGVDINRDLDYTKNGNGTTSGMGSSFGRYLIDEDHMSFIHNPNLTV
CVPIAVGESDFENLNTEEFSSESENENSKDLDDTSSSEGSTIDIKPDVEVEAVVVEAEEV
YLDPENCWTPECIIKYPCCDVPITHGWGKYWWFLRKTCYLIVEHNWFETVIIFMILLSSG
ALAFEDVYIQQRKTIRTILEYADSVFTYIFILEMLLKWVAYGFHKYFTNAWCWLDFFIVD
VSIISLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLV
CLIFWLIFSIMGVNLFAGKYYYCFNQTAEEYFEAREVNNKTQCLALIEQNFTEVRWKNVK
INFDNVGAGYLALLQVATFKGWMDIMYAAIDSRRVEDQPIYEDNIYMYIYFVIFIIFGSF
FTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQG
LVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSDETENILYWVNFIFIVAFTTEFVLKL
FALRHYYFTNGWNVFDTVVVVLSIAGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKG
AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGN
SMICLFMITTSAGWDGLLLPILNYPPDCDSTMENPGAPSTGNCGNPSVGIFFFVMYIIIS
FLVVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPAASQFITFAKLGDFAD
TLEHPLRIPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERF
VQANPSKVSYEPITTTLRRRQEDISARCIQKAYRAHLLKRGFICKCRPKTKLENGGTNNE
EKKESTLSTASLPSYDTVTKPDKEKQEENEGERREKDRNQKDERESKF
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgggctttcctggctctcttcagactcatgacacaggacttctgggagaacctctacat
gctgaccctgcgggcagcaggaagacctacatgatcttctttgtgttggtgatcttcgtg
gggtccttctacctggtcaatctgatcctggctgtggtggccatggcctatgaggagcag
aaccaggccaccatggaggaggctgagcagaaagaggcggagttcaaagccatgctggag
cagatcaagaaccagcaggaggctgcacagtccaacgccatggcgacgtcggcaggcacc
atgtcggaggatgtaggggatgatgacggcggggggaccctgtcctgtagctcgtcagag
atgtccaagctcagctccaagagcgccaaggagcggcgcaaccgcaagaagaagtggcgc
cagaaagagcagtctcagcgggaggagaagggggactgcgagaagtttgtcaagtccgag
tcggacgacggcagtaagaagagccgcttccgtttccctgacaaccggctaggccgcaag
tcttccatcatgaaccagtcccttctcagtatccccggctcaccgtttctgtcgaggcac
aacagcaagagcagcatcttcagcttcaagggcgtgggctcggagaacgagttcgccgac
gacgagcacagcatggtggaggagtgcgaggaaaggcggggcccccggttcagcccgtac
cggcggtgcagctacacgagctaccaccacggtggtgggaagaggaactcctcggtggac
tgcaacggcgtggtgtctctgatcagtcctgggaccggcggacgccttttgcctgaggtg
aaaatagataaggcatctggtgacgacagtcccactactgaggttgaggtgaagaagaag
ctgtctggttccctgatggtgtctatggaccagctcaatacctccttcggaaggaaagag
cggaccaacagtgtcatgagcgtcatcaccaacacactagcggaggaactggaggagtct
cagcgtagttgtccgccgtggtggtataagttctccaacatggtcctcatctgggagtgt
tgtcccatctggttgaagatcaaggagattgtcaacctgatcgtcatggaccccttcgtg
gacctggccatcactgtctgcatcgtcctcaacaccctgttcatggccatggagcactat
cccatgaccccgcactttgaggaggtgctgttcgtgggaaacttggtgttcacagggatc
tttgctgtggagatgtttgccaagttggttgccatggatccctactactacttccaggag
gggtggaactgcttcgatggcttcattgtgactctgtccttagtggagctggcattggct
gacgtggaggggctgtccgtgctcagatcattccgattgctgagagtgtttaaactggcc
aaatcatggcccacactcaacatgctgattaagattatcggtaactctgtgggcgccctg
ggaaacctgaccctcgtcttagctctcatcgtcttcatctttgccgtggtcggcatgcag
ctgttcggcaagaactacaaggactgtgtgtgtaagatcgccctggactgtgagctgccc
cgctggcacatgcacgacttcttccactcattcctgatggtgttccgggtgctgtgcggg
gagtggatcgagaccatgtgggactgtatggaggtggctggccagggcatgtgtctcatc
gtcttcatgatggtcatggtcatcgggaacttggtggtgttgaaccttttccttgccttg
ctgctgtcctcgttcagcgcagacaatttagccgcaacagatgacgacggagaaatgaac
aaccttcagatctccgtcatccgcatcaagaagggcattgcctggttcaagatcaagctg
gcagagttggtgctcagcttgaccaagaagccgccggtggaggatgaacagaaaaccgta
gacgacatgtacgacaagaaactgaactgtatcgccaaccagagtggtgtggatatcaac
cgtgacctggactacaccaagaatggtaacggcaccactagtggtatgggaagcagcttc
gggaggtacttgatcgacgaggaccacatgtcgttcatccacaaccctaacctgaccgtg
tgcgttcctatcgcggtcggagagtctgacttcgaaaacctcaacaccgaggaattcagc
agcgagtcggagaacgagaacagcaaagatctggatgacaccagctcatcagagggcagc
accatagacatcaagcctgatgtggaggtggaggcggtggtggtggaggctgaagaagtg
tacttagacccagaaaactgttggacacctgagtgtattatcaagtatccttgctgcgat
gtgcccatcactcacgggtggggaaaatattggtggttcctgagaaagacatgctatctt
attgtggagcataactggttcgaaaccgtcattatctttatgatcctactcagtagtggg
gccctggcttttgaggatgtgtacattcagcagaggaagaccatcaggaccatcttggaa
tacgccgacagtgtgttcacctacatcttcatcctggagatgctgctcaagtgggtcgct
tacggattccacaagtacttcaccaacgcctggtgctggcttgacttcttcatcgtcgat
gtgtctataatcagtctggtagctaatgcactgggctactcggatctaggtcctattaaa
tcactcaggacactaagggccttgagacccctcagagccttgtcacgttttgaagggatg
agggttgtagtcaacgccctggtgggagccatcccctccattatgaatgtgttgctggtt
tgcctcatcttttggctgattttcagtatcatgggagtcaacttgtttgcgggcaagtat
tactactgtttcaaccagacagcagaggagtactttgaggccagagaggtcaacaacaag
acacagtgcctggccctcattgaacagaacttcactgaggtcaggtggaagaatgtcaag
atcaactttgacaatgttggcgcaggatacctggctctgcttcaagtggcaacattcaaa
ggctggatggacatcatgtacgcagccatagactccagaagggtggaggaccagcccatc
tatgaagacaacatctacatgtatatctacttcgtcatcttcatcatctttggatccttc
ttcaccctcaacctcttcatcggtgtcatcattgacaacttcaaccaacagaagaaaaag
tttggaggtcaggacatcttcatgacagaggaacagaagaagtactacaacgccatgaag
aaactgggttcaaagaagccccagaaacccattcccagaccacagaacaagatccaaggg
ttggtgtttgactttgtgacccagcaagtcttcgacatctccattatgatgttgatctgc
ctcaacatggtcaccatgatggtggagacagacgaccagtcggacgagacggagaacatc
ctctattgggtcaacttcatcttcatcgtggcattcaccaccgagttcgtcctgaaactc
ttcgccctgcgccactactacttcaccaatggctggaacgtgttcgacacggtcgtcgtc
gtcctgtccatcgcgggcatgttcctggctgacatcattgagaagtacttcgtatcgccg
accctcttcagggtcatccgattggctcgaatcggccgcatcctgcgtctgatcaaaggg
gccaagggcatacggactttactcttcgccttgatgatgtcacttcctgccctgttcaac
atcggcctcctgctcttcctggtgatgttcatcttcagcatcttcggaatgtccaacttc
ggctacgtcaaacacggggccgggatagacgacatgtataactttgagaccttcgggaac
agcatgatctgcttattcatgatcaccacgtctgcaggctgggatggtctcttgctcccc
atcctcaactaccctcctgactgcgactcaaccatggagaacccaggtgcaccgtctaca
ggcaactgcggcaacccctcagttggcatatttttctttgtgatgtatatcattatttcc
ttccttgtcgtagtcaacatgtacatcgccatcatcttagagaatttcagtgtagcaaca
gaagagagcgccgacccgctcagtgaagacgactttgagacattctatgaaatctgggag
aaatttgaccccgctgcttcccagttcatcaccttcgcaaagctgggtgacttcgcagac
accctggagcaccctctccgcattcccaagcccaacaccatcgagctgatcgccatggac
atgcccatggtcagtggcgaccgcatccactgcctggacatcctgtttgccttcaccaag
cgtgtgctgggcgacagtggcgagctggacatgctacgcacgcagatggaggagcgcttc
gtgcaggccaacccctccaaggtgtcgtacgagcccatcaccacgacactgcgccggcgc
caggaggacatatccgcacgttgcatccagaaagcctaccgcgctcacctcctcaaacgg
ggcttcatctgcaagtgcaggcccaagaccaagctggagaatggtgggaccaacaacgag
gagaagaaagagagcacactctccaccgcctctcttccctcgtacgacaccgtgaccaaa
cctgacaaggagaaacaggaagagaacgagggagagaggagagagaaggacagaaatcaa
aaagatgagcgggaatctaaattttag
DBGET
integrated database retrieval system
